diff options
| author | Rene Ladan <rene@FreeBSD.org> | 2018-06-07 00:34:18 +0000 |
|---|---|---|
| committer | Rene Ladan <rene@FreeBSD.org> | 2018-06-07 00:34:18 +0000 |
| commit | 7b4e2fac310c869ae726093c8477595ea2ba05f7 (patch) | |
| tree | 22d4c67d5416102a354a83bb192b7cc40174dd2c /biology/ssaha/files/patch-SequenceReader.cpp | |
| parent | x11/deforaos-desktop: remove expired dependency on deforaos-mixer (diff) | |
Remove expired ports:
2018-06-06 biology/ssaha: Broken for more than 6 months
2018-06-06 biology/crux: Broken for more than 6 months
2018-06-06 biology/ariadne: Broken for more than 6 months
2018-06-06 cad/sceptre: Broken for more than 6 months
2018-06-06 cad/cider: Broken for more than 6 months
2018-06-06 chinese/scim-array: Broken for more than 6 months
2018-06-06 chinese/xpdf: Broken for more than 6 months
2018-06-06 chinese/telnet: Broken for more than 6 months
2018-06-06 comms/java-commapi-freebsd: Depends on BROKEN and expiring comms/java-commapi
2018-06-06 comms/soundmodem: Broken for more than 6 months
2018-06-06 comms/jsdr: Broken for more than 6 months
2018-06-06 comms/java-commapi: Broken for more than 6 months
2018-06-06 converters/pdf2djvu: Broken for more than 6 months
2018-06-06 databases/rdb: Broken for more than 6 months
2018-06-06 databases/animenfo-client: Broken for more than 6 months
2018-06-06 databases/ruby-mysql: Broken for more than 6 months
2018-06-06 databases/riak: Broken for more than 6 months
2018-06-06 databases/animenfo-client-gtk: Broken for more than 6 months
2018-06-06 databases/rdfdb: Broken for more than 6 months
2018-06-06 databases/riak2: Broken for more than 6 months
2018-06-06 devel/subversion-static: Broken for more than 6 months
2018-06-06 japanese/xgate: Broken for more than 6 months
2018-06-06 textproc/opengrm-ngram: Broken for more than 6 months
2018-06-06 textproc/ocaml-tyxml: Depends on BROKEN and expiring www/ocaml-net
2018-06-06 www/ocaml-net: Broken for more than 6 months
2018-06-06 audio/linux-genpuid: Broken for more than 6 months
2018-06-06 x11/enventor: Broken for more than 6 months
2018-06-06 audio/xmms-timidity: Broken for more than 6 months
2018-06-06 audio/kaudiocreator: Broken for more than 6 months
2018-06-06 audio/jxm: Depends on BROKEN and expiring comms/java-commapi
2018-06-06 audio/deforaos-mixer: Broken for more than 6 months
2018-06-06 audio/gkrellmss2: Broken for more than 6 months
2018-06-06 audio/ogg2mp3: Broken for more than 6 months
2018-06-06 audio/abcmidi: Broken for more than 6 months
2018-06-06 benchmarks/netpipe: Broken for more than 6 months
2018-06-06 biology/plink: Broken for more than 6 months
Notes
Notes:
svn path=/head/; revision=471892
Diffstat (limited to 'biology/ssaha/files/patch-SequenceReader.cpp')
| -rw-r--r-- | biology/ssaha/files/patch-SequenceReader.cpp | 20 |
1 files changed, 0 insertions, 20 deletions
diff --git a/biology/ssaha/files/patch-SequenceReader.cpp b/biology/ssaha/files/patch-SequenceReader.cpp deleted file mode 100644 index 356c6e8363d9..000000000000 --- a/biology/ssaha/files/patch-SequenceReader.cpp +++ /dev/null @@ -1,20 +0,0 @@ ---- ./SequenceReader/SequenceReader.cpp.orig 2004-03-01 13:51:29.000000000 -0300 -+++ ./SequenceReader/SequenceReader.cpp 2008-06-12 15:39:31.000000000 -0300 -@@ -179,7 +179,7 @@ - - for ( ; i != reverseBuffer_.end() ; i++, j-- ) - { -- *i= reverseChar[ *j ]; -+ *i= reverseChar[ (int) *j ]; - // cout << "char: " << (int)*j << *j << " - " << (int)*i << *i << endl; - } - -@@ -356,7 +356,7 @@ - throw SSAHAException - ("Requested seq start exceeds requested seq end in SourceReaderIndex::extractSource"); - } // ~if -- else if (seqEnd>lastSourceSeq_.size() ) -+ else if (seqEnd>(int)lastSourceSeq_.size() ) - { - cout << seqEnd << " " << lastSourceSeq_.size() << endl; - throw SSAHAException |