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* science/afni: update to 21.3.12Fernando Apesteguía2021-12-201-14/+10
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* science/afni: update to 21.3.05Fernando Apesteguía2021-11-101-7/+7
| | | | Reported by: portscout
* science/afni: fix build on non-x86Piotr Kubaj2021-10-221-0/+20
| | | | fpsetprec() is only on amd64 and i386 and requires x87 FPU. It's possible to build without x87, just how it's done on Linux.
* science/afni: update to 21.2.06Fernando Apesteguía2021-09-122-7/+19
| | | | | | | | | | * Remove openmp support. We don't seem to need it. * Adjust patch * Add -fcommon to make it build in 13 and 14-current * Add patch to include -DPIC -fPIC in i386. Otherwise we get: ld: error: can't create dynamic relocation R_386_32 against symbol: .L.str.13 in readonly segment
* science/afni: update to 21.1.12Fernando Apesteguía2021-06-161-9/+13
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* science/afni: update to 20.2.16Fernando Apesteguía2020-09-031-60/+48
| | | | | | | | | | | | Many utilities are not provided anymore. Most of them are marked in src/Makefile.INCLUDE under the comment "not distributed 25 Aug 2020" Others are not marked like that, but they are not shipped anyway, like 3dAnatNudge which has a comment that explains why: "This program (3dAnatNudge) is old, obsolete, and not maintained!" Reported by: portscout
* science/afni: update to 20.2.11Fernando Apesteguía2020-08-132-53/+10
| | | | Reported by: portscout
* science/afni: update to 20.2.05Fernando Apesteguía2020-07-221-4/+4
| | | | Reported by: portscout
* science/afni: Upgrade to 20.1.02Jason W. Bacon2020-04-202-12/+25
| | | | | | | | | Added some common R-cran run dependencies Removed obsolete reinplace patches Improved do-install to better fit filesystem hierarchy Releasing maintainership as I no longer work with any AFNI users Reported by: portscout
* science/afni: Remove dependency on libXpNiclas Zeising2019-09-281-2/+2
| | | | | | Remove dependency on libXp from science/afni, it is not needed, and libXp is being deprecated. Remove deprecation from science/afni
* Convert to UCL & cleanup pkg-message (categories s)Mathieu Arnold2019-08-141-3/+6
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* science/afni: Upgrade to 19.1.20Jason W. Bacon2019-06-183-44/+0
| | | | | | Upstreamed FreeBSD patches, other minor fixes and enhancements Reported by: portscout, Rick Reynolds (NIH)
* science/afni: Upgrade to 19.1.14Jason W. Bacon2019-06-011-37/+8
| | | | Minor bug fixes and enhancements, some FreeBSD patches upstreamed
* science/afni: Upgrade to 19.1.10Jason W. Bacon2019-05-222-0/+27
| | | | | Rapid response from upstream on reported issue. Additional patches to be upstreamed in next release.
* science/afni: Upgrade to 19.1.08Jason W. Bacon2019-05-206-56/+86
| | | | | | Switch from personal dist snapshots to Github releases Improve staging procedure to preserve results of build phase Temporarily use bundled GLw pending fix of libglw port
* - Fix trailing whitespace in pkg-messagesDmitry Marakasov2016-05-191-2/+2
| | | | Approved by: portmgr blanket
* - Fix trailing whitespace in MakefilesDmitry Marakasov2016-05-191-6/+6
| | | | Approved by: portmgr blanket
* Update to 2015.11.13.Raphael Kubo da Costa2016-02-277-396/+113
| | | | | | | Upgrade to a more recent snapshot, and stop requiring GCC. PR: 206930 Submitted by: Jason Bacon <bacon4000@gmail.com> (maintainer)
* Convert GMAKE to MAKE_CMDBaptiste Daroussin2014-06-252-47/+47
| | | | | | | Please note that lots of invocation of MAKE_CMD here are wrong as they do not properly respect MAKE_ENV and friends With hat: portmgr
* science/afni: bring back into shape.Rene Ladan2014-06-175-6/+447
| | | | | | | | | | | | | | | | | | | | | - Stage support - Unexpire - Add license (GPLv2) - Use modern LIB_DEPENDS - Explicitly mention dependencies - Add CONFLICTS with im-*, nifticlib-* and open-usp-tukubai-* - Use perl5 and GCC - Tidy pkg-descr - Clean up pkg-plist - Bump PORTREVISION While here: - Use BROKEN_arch to avoid including bsd.port.pre.mk - Use PORT_OPTIONS:MDOCS instead of NOPORTDOCS - Remove obsolete post-install target PR: 186988 Submitted by: maintainer (jwbacon@tds.net)
* s/X11BASE/LOCALBASE/, or equivalent.Doug Barton2012-06-241-5/+5
| | | | The X11BASE variable is long gone, however these ports were not updated.
* - Update to build 2012-04-17 [1]Pawel Pekala2012-05-116-15/+66
| | | | | | | | - Projest has new homepage [1] - Mark MAKE_JOBS_UNSAFE PR: ports/167651 [1] Submitted by: Jason Bacon <jwbacon@tds.net> (maintainer) [1]
* - Remove unneeded dependency from gtk12/gtk20 [1]Martin Wilke2008-04-191-5/+5
| | | | | | | | | | | | | | | - Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG - Remove X11BASE support in favor of LOCALBASE or PREFIX - Use USE_LDCONFIG instead of INSTALLS_SHLIB - Remove unneeded USE_GCC 3.4+ Thanks to all Helpers: Dmitry Marakasov, Chess Griffin, beech@, dinoex, rafan, gahr, ehaupt, nox, itetcu, flz, pav PR: 116263 Tested on: pointyhat Approved by: portmgr (pav)
* - Update to 2008.01.02.1043Thomas Abthorpe2008-01-283-82/+13
| | | | | PR: ports/119961 Submitted by: Jason Bacon <bacon smithers.neuro.mcw.edu> (maintainer)
* - Update to 2007.06.15.1339Martin Wilke2007-06-214-1/+91
| | | | | | | - Unbreak PR: 113887 Submitted by: Jason Bacon <bacon@smithers.neuro.mcw.edu> (maintainer)
* - Update to 2007.04.18.1830Martin Wilke2007-04-211-5/+5
| | | | | | | - Respect X11BASE PR: 111890 Submitted by: Jason Bacon <bacon@smithers.neuro.mcw.edu> (maintainer)
* - Fix pluginsPav Lucistnik2006-09-242-7/+108
| | | | | | | - Update to 2006.06.30.1332 PR: ports/103318 Submitted by: Jason Bacon <bacon@smithers.neuro.mcw.edu> (maintainer)
* Add new port science/afniVasil Dimov2006-01-251-0/+7
AFNI (Advanced Functional Neuro Imaging) is a tool for analyzing 3 dimensional images, especially functional MRI images used in brain mapping research. WWW: http://afni.nimh.nih.gov/ PR: ports/90752 Submitted by: Jason Bacon <bacon@smithers.neuro.mcw.edu> Reviewed by: garga (mentor) Approved by: garga (mentor)
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