1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
|
--- configure.orig 2023-11-21 22:33:29 UTC
+++ configure
@@ -5513,7 +5513,7 @@ _ACEOF
/* end confdefs.h. */
$ac_c_conftest_c99_program
_ACEOF
-for ac_arg in '' -std=gnu99 -std=c99 -c99 -qlanglvl=extc1x -qlanglvl=extc99 -AC99 -D_STDC_C99=
+for ac_arg in '' -std=gnu99 -qlanglvl=extc1x -qlanglvl=extc99
do
CC="$ac_save_CC $ac_arg"
if ac_fn_c_try_compile "$LINENO"
@@ -6659,7 +6659,7 @@ _ACEOF
/* end confdefs.h. */
$ac_c_conftest_c99_program
_ACEOF
-for ac_arg in '' -std=gnu99 -std=c99 -c99 -qlanglvl=extc1x -qlanglvl=extc99 -AC99 -D_STDC_C99=
+for ac_arg in '' -std=gnu99 -qlanglvl=extc1x -qlanglvl=extc99
do
CC="$ac_save_CC $ac_arg"
if ac_fn_c_try_compile "$LINENO"
@@ -7270,7 +7270,7 @@ _ACEOF
/* end confdefs.h. */
$ac_cxx_conftest_cxx98_program
_ACEOF
-for ac_arg in '' -std=gnu++98 -std=c++98 -qlanglvl=extended -AA
+for ac_arg in '' -std=gnu++98 -qlanglvl=extended -AA
do
CXX="$ac_save_CXX $ac_arg"
if ac_fn_cxx_try_compile "$LINENO"
@@ -12320,7 +12320,7 @@ printf %s "checking whether the $compiler linker ($LD)
hardcode_minus_L=no
hardcode_shlibpath_var=unsupported
inherit_rpath=no
- link_all_deplibs=unknown
+ link_all_deplibs=no
module_cmds=
module_expsym_cmds=
old_archive_from_new_cmds=
@@ -12622,7 +12622,7 @@ _LT_EOF
wlarc=
else
archive_cmds='$CC -shared $pic_flag $libobjs $deplibs $compiler_flags $wl-soname $wl$soname -o $lib'
- archive_expsym_cmds='$CC -shared $pic_flag $libobjs $deplibs $compiler_flags $wl-soname $wl$soname $wl-retain-symbols-file $wl$export_symbols -o $lib'
+ archive_expsym_cmds='echo "{ global:" > $lib-ver~ sed -e "s|$|;|" < $export_symbols >> $lib-ver~ echo "local: *; };" >> $lib-ver~$CC -shared $pic_flag $libobjs $deplibs $compiler_flags $wl-soname $wl$soname $wl-version-script $wl$lib-ver -o $lib'
fi
;;
@@ -12641,7 +12641,7 @@ _LT_EOF
_LT_EOF
elif $LD --help 2>&1 | $GREP ': supported targets:.* elf' > /dev/null; then
archive_cmds='$CC -shared $pic_flag $libobjs $deplibs $compiler_flags $wl-soname $wl$soname -o $lib'
- archive_expsym_cmds='$CC -shared $pic_flag $libobjs $deplibs $compiler_flags $wl-soname $wl$soname $wl-retain-symbols-file $wl$export_symbols -o $lib'
+ archive_expsym_cmds='echo "{ global:" > $lib-ver~ sed -e "s|$|;|" < $export_symbols >> $lib-ver~ echo "local: *; };" >> $lib-ver~$CC -shared $pic_flag $libobjs $deplibs $compiler_flags $wl-soname $wl$soname $wl-version-script $wl$lib-ver -o $lib'
else
ld_shlibs=no
fi
@@ -12670,7 +12670,7 @@ _LT_EOF
if $LD --help 2>&1 | $GREP ': supported targets:.* elf' > /dev/null; then
hardcode_libdir_flag_spec='$wl-rpath $wl$libdir'
archive_cmds='$CC -shared $libobjs $deplibs $compiler_flags $wl-soname $wl$soname -o $lib'
- archive_expsym_cmds='$CC -shared $libobjs $deplibs $compiler_flags $wl-soname $wl$soname $wl-retain-symbols-file $wl$export_symbols -o $lib'
+ archive_expsym_cmds='echo "{ global:" > $lib-ver~ sed -e "s|$|;|" < $export_symbols >> $lib-ver~ echo "local: *; };" >> $lib-ver~$CC -shared $libobjs $deplibs $compiler_flags $wl-soname $wl$soname $wl-version-script $wl$lib-ver -o $lib'
else
ld_shlibs=no
fi
@@ -12688,7 +12688,7 @@ _LT_EOF
*)
if $LD --help 2>&1 | $GREP ': supported targets:.* elf' > /dev/null; then
archive_cmds='$CC -shared $pic_flag $libobjs $deplibs $compiler_flags $wl-soname $wl$soname -o $lib'
- archive_expsym_cmds='$CC -shared $pic_flag $libobjs $deplibs $compiler_flags $wl-soname $wl$soname $wl-retain-symbols-file $wl$export_symbols -o $lib'
+ archive_expsym_cmds='echo "{ global:" > $lib-ver~ sed -e "s|$|;|" < $export_symbols >> $lib-ver~ echo "local: *; };" >> $lib-ver~$CC -shared $pic_flag $libobjs $deplibs $compiler_flags $wl-soname $wl$soname $wl-version-script $wl$lib-ver -o $lib'
else
ld_shlibs=no
fi
@@ -13344,7 +13344,7 @@ printf "%s\n" "$lt_cv_irix_exported_symbol" >&6; }
hardcode_direct_absolute=yes
if test -z "`echo __ELF__ | $CC -E - | $GREP __ELF__`"; then
archive_cmds='$CC -shared $pic_flag -o $lib $libobjs $deplibs $compiler_flags'
- archive_expsym_cmds='$CC -shared $pic_flag -o $lib $libobjs $deplibs $compiler_flags $wl-retain-symbols-file,$export_symbols'
+ archive_expsym_cmds='echo "{ global:" > $lib-ver~ sed -e "s|$|;|" < $export_symbols >> $lib-ver~ echo "local: *; };" >> $lib-ver~$CC -shared $pic_flag -o $lib $libobjs $deplibs $compiler_flags $wl-version-script,$lib-ver'
hardcode_libdir_flag_spec='$wl-rpath,$libdir'
export_dynamic_flag_spec='$wl-E'
else
@@ -14194,7 +14194,7 @@ freebsd* | dragonfly*)
version_type=freebsd-$objformat
case $version_type in
freebsd-elf*)
- library_names_spec='$libname$release$shared_ext$versuffix $libname$release$shared_ext$major $libname$shared_ext'
+ library_names_spec='$libname$release$shared_ext$versuffix $libname$release$shared_ext$major $libname$shared_ext' soname_spec='$libname$release$shared_ext$major'
soname_spec='$libname$release$shared_ext$major'
need_version=no
need_lib_prefix=no
@@ -15345,7 +15345,7 @@ printf %s "checking whether stripping libraries is pos
old_striplib=
{ printf "%s\n" "$as_me:${as_lineno-$LINENO}: checking whether stripping libraries is possible" >&5
printf %s "checking whether stripping libraries is possible... " >&6; }
-if test -n "$STRIP" && $STRIP -V 2>&1 | $GREP "GNU strip" >/dev/null; then
+if test -n "$STRIP" && $STRIP -V 2>&1 | $GREP "strip" >/dev/null; then
test -z "$old_striplib" && old_striplib="$STRIP --strip-debug"
test -z "$striplib" && striplib="$STRIP --strip-unneeded"
{ printf "%s\n" "$as_me:${as_lineno-$LINENO}: result: yes" >&5
@@ -15592,7 +15592,7 @@ module_expsym_cmds_CXX=
inherit_rpath_CXX=no
module_cmds_CXX=
module_expsym_cmds_CXX=
-link_all_deplibs_CXX=unknown
+link_all_deplibs_CXX=no
old_archive_cmds_CXX=$old_archive_cmds
reload_flag_CXX=$reload_flag
reload_cmds_CXX=$reload_cmds
@@ -15806,7 +15806,7 @@ with_gnu_ld=$lt_cv_prog_gnu_ld
# archiving commands below assume that GNU ld is being used.
if test yes = "$with_gnu_ld"; then
archive_cmds_CXX='$CC $pic_flag -shared -nostdlib $predep_objects $libobjs $deplibs $postdep_objects $compiler_flags $wl-soname $wl$soname -o $lib'
- archive_expsym_cmds_CXX='$CC $pic_flag -shared -nostdlib $predep_objects $libobjs $deplibs $postdep_objects $compiler_flags $wl-soname $wl$soname $wl-retain-symbols-file $wl$export_symbols -o $lib'
+ archive_expsym_cmds_CXX='echo "{ global:" > $lib-ver~ sed -e "s|$|;|" < $export_symbols >> $lib-ver~ echo "local: *; };" >> $lib-ver~$CC $pic_flag -shared -nostdlib $predep_objects $libobjs $deplibs $postdep_objects $compiler_flags $wl-soname $wl$soname $wl-version-script $wl$lib-ver -o $lib'
hardcode_libdir_flag_spec_CXX='$wl-rpath $wl$libdir'
export_dynamic_flag_spec_CXX='$wl--export-dynamic'
@@ -16502,7 +16502,7 @@ fi
case `$CC -V 2>&1` in
*"Version 7."*)
archive_cmds_CXX='$CC -shared $predep_objects $libobjs $deplibs $postdep_objects $compiler_flags $wl-soname $wl$soname -o $lib'
- archive_expsym_cmds_CXX='$CC -shared $predep_objects $libobjs $deplibs $postdep_objects $compiler_flags $wl-soname $wl$soname $wl-retain-symbols-file $wl$export_symbols -o $lib'
+ archive_expsym_cmds_CXX='echo "{ global:" > $lib-ver~ sed -e "s|$|;|" < $export_symbols >> $lib-ver~ echo "local: *; };" >> $lib-ver~$CC -shared $predep_objects $libobjs $deplibs $postdep_objects $compiler_flags $wl-soname $wl$soname $wl-version-script $wl$lib-ver -o $lib'
;;
*) # Version 8.0 or newer
tmp_idyn=
@@ -16510,7 +16510,7 @@ fi
ia64*) tmp_idyn=' -i_dynamic';;
esac
archive_cmds_CXX='$CC -shared'"$tmp_idyn"' $libobjs $deplibs $compiler_flags $wl-soname $wl$soname -o $lib'
- archive_expsym_cmds_CXX='$CC -shared'"$tmp_idyn"' $libobjs $deplibs $compiler_flags $wl-soname $wl$soname $wl-retain-symbols-file $wl$export_symbols -o $lib'
+ archive_expsym_cmds_CXX='echo "{ global:" > $lib-ver~ sed -e "s|$|;|" < $export_symbols >> $lib-ver~ echo "local: *; };" >> $lib-ver~$CC -shared'"$tmp_idyn"' $libobjs $deplibs $compiler_flags $wl-soname $wl$soname $wl-version-script $wl$lib-ver -o $lib'
;;
esac
archive_cmds_need_lc_CXX=no
@@ -16542,7 +16542,7 @@ fi
;;
*) # Version 6 and above use weak symbols
archive_cmds_CXX='$CC -shared $pic_flag $predep_objects $libobjs $deplibs $postdep_objects $compiler_flags $wl-soname $wl$soname -o $lib'
- archive_expsym_cmds_CXX='$CC -shared $pic_flag $predep_objects $libobjs $deplibs $postdep_objects $compiler_flags $wl-soname $wl$soname $wl-retain-symbols-file $wl$export_symbols -o $lib'
+ archive_expsym_cmds_CXX='echo "{ global:" > $lib-ver~ sed -e "s|$|;|" < $export_symbols >> $lib-ver~ echo "local: *; };" >> $lib-ver~$CC -shared $pic_flag $predep_objects $libobjs $deplibs $postdep_objects $compiler_flags $wl-soname $wl$soname $wl-version-script $wl$lib-ver -o $lib'
;;
esac
@@ -16553,7 +16553,7 @@ fi
cxx*)
# Compaq C++
archive_cmds_CXX='$CC -shared $predep_objects $libobjs $deplibs $postdep_objects $compiler_flags $wl-soname $wl$soname -o $lib'
- archive_expsym_cmds_CXX='$CC -shared $predep_objects $libobjs $deplibs $postdep_objects $compiler_flags $wl-soname $wl$soname -o $lib $wl-retain-symbols-file $wl$export_symbols'
+ archive_expsym_cmds_CXX='echo "{ global:" > $lib-ver~ sed -e "s|$|;|" < $export_symbols >> $lib-ver~ echo "local: *; };" >> $lib-ver~$CC -shared $predep_objects $libobjs $deplibs $postdep_objects $compiler_flags $wl-soname $wl$soname -o $lib $wl-version-script $wl$lib-ver'
runpath_var=LD_RUN_PATH
hardcode_libdir_flag_spec_CXX='-rpath $libdir'
@@ -16587,7 +16587,7 @@ fi
# Sun C++ 5.9
no_undefined_flag_CXX=' -zdefs'
archive_cmds_CXX='$CC -G$allow_undefined_flag -h$soname -o $lib $predep_objects $libobjs $deplibs $postdep_objects $compiler_flags'
- archive_expsym_cmds_CXX='$CC -G$allow_undefined_flag -h$soname -o $lib $predep_objects $libobjs $deplibs $postdep_objects $compiler_flags $wl-retain-symbols-file $wl$export_symbols'
+ archive_expsym_cmds_CXX='echo "{ global:" > $lib-ver~ sed -e "s|$|;|" < $export_symbols >> $lib-ver~ echo "local: *; };" >> $lib-ver~$CC -G$allow_undefined_flag -h$soname -o $lib $predep_objects $libobjs $deplibs $postdep_objects $compiler_flags $wl-version-script $wl$lib-ver'
hardcode_libdir_flag_spec_CXX='-R$libdir'
whole_archive_flag_spec_CXX='$wl--whole-archive`new_convenience=; for conv in $convenience\"\"; do test -z \"$conv\" || new_convenience=\"$new_convenience,$conv\"; done; func_echo_all \"$new_convenience\"` $wl--no-whole-archive'
compiler_needs_object_CXX=yes
@@ -16655,7 +16655,7 @@ fi
archive_cmds_CXX='$CC -shared $pic_flag $predep_objects $libobjs $deplibs $postdep_objects $compiler_flags -o $lib'
hardcode_libdir_flag_spec_CXX='$wl-rpath,$libdir'
if test -z "`echo __ELF__ | $CC -E - | grep __ELF__`"; then
- archive_expsym_cmds_CXX='$CC -shared $pic_flag $predep_objects $libobjs $deplibs $postdep_objects $compiler_flags $wl-retain-symbols-file,$export_symbols -o $lib'
+ archive_expsym_cmds_CXX='echo "{ global:" > $lib-ver~ sed -e "s|$|;|" < $export_symbols >> $lib-ver~ echo "local: *; };" >> $lib-ver~$CC -shared $pic_flag $predep_objects $libobjs $deplibs $postdep_objects $compiler_flags $wl-version-script,$lib-ver -o $lib'
export_dynamic_flag_spec_CXX='$wl-E'
whole_archive_flag_spec_CXX=$wlarc'--whole-archive$convenience '$wlarc'--no-whole-archive'
fi
@@ -18186,7 +18186,7 @@ freebsd* | dragonfly*)
version_type=freebsd-$objformat
case $version_type in
freebsd-elf*)
- library_names_spec='$libname$release$shared_ext$versuffix $libname$release$shared_ext$major $libname$shared_ext'
+ library_names_spec='$libname$release$shared_ext$versuffix $libname$release$shared_ext$major $libname$shared_ext' soname_spec='$libname$release$shared_ext$major'
soname_spec='$libname$release$shared_ext$major'
need_version=no
need_lib_prefix=no
@@ -21930,7 +21930,7 @@ case $host_os in
case $host_os in
- freebsd*)
+dragonfly* | freebsd*)
# -kthread: FreeBSD kernel threads (preferred to -pthread since SMP-able)
# lthread: LinuxThreads port on FreeBSD (also preferred to -pthread)
@@ -22897,24 +22897,19 @@ HDF5 support is being disabled (equivalent to --with-h
with_hdf5="no"
with_hdf5_fortran="no"
else
- HDF5_SHOW=$(eval $H5CC -show)
+ HDF5_SHOW=`$PKG_CONFIG --cflags hdf5 --libs hdf5`
- HDF5_CC=$(eval $H5CC -show | head -n 1 | $AWK '{print $1}')
- if test "$HDF5_CC" = "ccache"; then
- HDF5_CC=$(eval $H5CC -show | head -n 1 | $AWK '{print $2}')
- fi
+ HDF5_CC=$CC
- HDF5_VERSION=$(eval $H5CC -showconfig | $GREP 'HDF5 Version:' \
- | $AWK '{print $3}')
+ HDF5_VERSION=`$GREP 'HDF5 Version:' /usr/local/lib/libhdf5.settings \
+ | $AWK '{print $3}'`
- HDF5_tmp_flags=$(eval $H5CC -showconfig \
- | $GREP 'FLAGS\|Extra libraries:' \
- | $AWK -F: '{printf("%s "), $2}' )
+ HDF5_tmp_flags=`$GREP 'FLAGS\|Extra libraries:' /usr/local/lib/libhdf5.settings \
+ | $AWK -F: '{printf("%s "), $2}'`
- HDF5_tmp_inst=$(eval $H5CC -showconfig \
- | $GREP 'Installation point:' \
- | $AWK '{print $NF}' )
+ HDF5_tmp_inst=`$GREP 'Installation point:' /usr/local/lib/libhdf5.settings \
+ | $AWK '{print $NF}'`
HDF5_CPPFLAGS="-I${HDF5_tmp_inst}/include"
@@ -23062,7 +23057,7 @@ printf "%s\n" "$H5FC" >&6; }
with_hdf5_fortran="yes"
- for arg in `$H5FC -show`
+ for arg in `$PKG_CONFIG --cflags hdf5_fortran --libs hdf5_fortran`
do
case "$arg" in #(
-I*) echo $HDF5_FFLAGS | $GREP -e "$arg" >/dev/null \
@@ -23172,7 +23167,7 @@ fi
if test "$ax_compare_version" = "true" ; then
-printf "%s\n" "#define H5_NO_DEPRECATED_SYMBOLS 1" >>confdefs.h
+# Remove on FreeBSD ports because we use 1.12 with 1.10 API
else
printf "%s\n" "#define H5_USE_18_API 1" >>confdefs.h
|