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PORTNAME= nibabel
DISTVERSION= 5.3.2
CATEGORIES= science python
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
MAINTAINER= yuri@FreeBSD.org
COMMENT= Read/write some common neuroimaging file formats
WWW= https://nipy.org/nibabel/
LICENSE= MIT
LICENSE_FILE= ${WRKSRC}/COPYING
BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}hatch-vcs>0:devel/py-hatch-vcs@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}hatchling>0:devel/py-hatchling@${PY_FLAVOR}
RUN_DEPENDS= ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}packaging>=17:devel/py-packaging@${PY_FLAVOR}
py311_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}importlib-resources>=1.1.0:devel/py-importlib-resources@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}typing-extensions>=4.6:devel/py-typing-extensions@${PY_FLAVOR}
py312_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}typing-extensions>=4.6:devel/py-typing-extensions@${PY_FLAVOR}
TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pytest-cov>0:devel/py-pytest-cov@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}pytest-doctestplus>0:devel/py-pytest-doctestplus@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}pytest-httpserver>0:devel/py-pytest-httpserver@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}pytest-xdist>0:devel/py-pytest-xdist@${PY_FLAVOR}
TEST_DEPENDS+= ${PYTHON_PKGNAMEPREFIX}pydicom>0:science/py-pydicom@${PY_FLAVOR}
USES= python
USE_PYTHON= pep517 concurrent autoplist pytest # 2 test fail, 1 error, see https://github.com/nipy/nibabel/issues/1386
NO_ARCH= yes
TEST_ENV= ${MAKE_ENV} PATH=${STAGEDIR}${PREFIX}/bin
post-install:
@${REINPLACE_CMD} -i '' -e 's|#!python|#!${PYTHON_CMD}|' \
${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/nibabel/cmdline/diff.py \
${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/nibabel/cmdline/ls.py
# tests as of 5.3.2: 2 failed, 5414 passed, 50 skipped, 37 xfailed, 5 xpassed, 500 warnings, 1 error in 318.54s (0:05:18)
.include <bsd.port.mk>
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