summaryrefslogtreecommitdiff
path: root/biology (follow)
Commit message (Expand)AuthorAgeFilesLines
* biology/py-dna-features-viewer: Add missing dependencyJason W. Bacon2022-02-121-2/+3
* biology/pooler: update to 1.82Fernando Apesteguía2022-02-102-7/+6
* biology/freebayes: Update to 1.3.6Jason W. Bacon2022-02-062-30/+23
* Update CONFLICTS definitions in categories a* to c*Stefan Eßer2022-02-0614-4/+25
* biology/py-dna-features-viewer: Add py-bcbio-gff depJason W. Bacon2022-02-031-1/+3
* biology/py-bcbio-gff: Read and write Generic Feature Format (GFF)Jason W. Bacon2022-02-034-0/+24
* biology/py-dna-features-viewer: Python lib to visualize DNA featuresJason W. Bacon2022-02-033-0/+35
* biology/hyphy: Update to 2.5.36Joseph Mingrone2022-02-033-4/+6
* security/mbedtls: Update to 2.28.0 and fix make testTijl Coosemans2022-01-281-1/+1
* biology/vcflib: Update to 1.0.3Jason W. Bacon2022-01-273-108/+148
* biology/ngs-sdk: Update 2.11.1 -> 2.11.2Yuri Victorovich2022-01-273-7/+7
* PyQt: Update sip to 6.5.0, reintroduce sip4 and simplify PyQt framework.Loïc Bartoletti2022-01-271-1/+1
* biology/ncbi-cxx-toolkit: Update 25.2.0 -> 26.0.1Yuri Victorovich2022-01-262-14/+11
* devel/cpu_features: Install cmake files, install headers into a dedicated dir...Yuri Victorovich2022-01-261-0/+1
* biology/viennarna: Update 2.4.18 -> 2.5.0Yuri Victorovich2022-01-243-6/+10
* biology/vsearch: Update to 2.21.1Jason W. Bacon2022-01-232-4/+4
* cleanup: remove transitive py27 deprecation (www/qt5-webengine)Rene Ladan2022-01-232-6/+0
* biology/ncbi-blast+: fix build on powerpcPiotr Kubaj2022-01-221-0/+4
* biology/mothur: Update 1.46.1 -> 1.47.0Yuri Victorovich2022-01-212-5/+5
* biology/fastp: Add USE_GCC to hack around seg faultsJason W. Bacon2022-01-211-1/+3
* biology/bowtie2: Update to 2.4.5Jason W. Bacon2022-01-212-4/+6
* biology/py-resdk: Update 13.8.0 -> 14.0.0Yuri Victorovich2022-01-192-4/+4
* biology/kallisto: Update to 0.48.0Jason W. Bacon2022-01-197-27/+97
* *: Clean up some thingsTobias Kortkamp2022-01-171-1/+1
* biology/bio-mocha: Update to 1.14-20220112Jason W. Bacon2022-01-135-507/+8
* biology/diamond: Update to 2.0.14Joseph Mingrone2022-01-132-4/+4
* math/gsl: bump portrevision of consumers after update to 2.7.1Tobias C. Berner2022-01-123-2/+3
* biology/rubygem-bio: Update to 2.0.3Po-Chuan Hsieh2022-01-122-4/+4
* textproc/py-sphinx: Update to 4.3.1Danilo G. Baio2022-01-111-0/+10
* Fix CONFLICTS entries of multiple portsStefan Eßer2022-01-1012-0/+24
* biology/vsearch: Update to 2.19.0Jason W. Bacon2022-01-074-38/+7
* biology/molden: update to 6.7Johannes M Dieterich2022-01-056-890/+48
* biology/phyml: update to 3.3.20211231Fernando Apesteguía2022-01-027-87/+12
* biology/minimap2: Update to 2.24Jason W. Bacon2021-12-312-5/+4
* biology/fastp: Update to 0.23.2Jason W. Bacon2021-12-302-4/+4
* biology/py-resdk: Update 13.7.0 -> 13.8.0Yuri Victorovich2021-12-292-4/+4
* devel/grpc: Update to 1.42.0Po-Chuan Hsieh2021-12-221-1/+1
* bio-mocha: Build plugin against bcftools 1.14, the current portJason W. Bacon2021-12-212-5/+7
* biology/py-bx-python: Update 0.8.11-6 -> 0.8.13Yuri Victorovich2021-12-212-10/+5
* biology/canu: fix CATEGORIESAntoine Brodin2021-12-201-1/+1
* biology/py-pysam: Update 0.16.0.1 -> 0.18.0Wen Heping2021-12-192-4/+4
* biology/canu: Update to 2.2Jason W. Bacon2021-12-1911-13/+204
* biology/seqtk: Update to 1.3Jason W. Bacon2021-12-183-17/+29
* biology/bcftools: Update to 1.14Jason W. Bacon2021-12-182-4/+4
* biology/samtools: Update to 1.14Jason W. Bacon2021-12-183-4/+5
* biology/htslib: Update to 1.14Jason W. Bacon2021-12-182-4/+4
* biology/freebayes: enable on riscv64Piotr Kubaj2021-12-171-1/+0
* biology/vcflib: unbreak on riscv64Piotr Kubaj2021-12-161-3/+0
* biology/hisat2: enable on riscv64Piotr Kubaj2021-12-161-1/+1
* biology/bowtie: enable on riscv64Piotr Kubaj2021-12-151-2/+2
generated by cgit v1.2.3 (git 2.25.1) at 2024-11-19 12:43:49 +0000