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* biology/gatk: Update 4.3.0.0 → 4.4.0.0Yuri Victorovich2023-06-042-8/+10
* biology/fastp: Update to 0.23.4Jason W. Bacon2023-05-312-7/+4
* biology/ncbi-blast+: Tag only for 64-bit architecturesJason W. Bacon2023-05-291-0/+3
* biology/hyphy: Update to 2.5.51hfJoseph Mingrone2023-05-282-4/+4
* biology/libsedml: Fix build with libsbml 5.20.0Po-Chuan Hsieh2023-05-271-0/+11
* biology/libcombine: Fix build with libsbml 5.20.0Po-Chuan Hsieh2023-05-271-0/+11
* biology/libsbml: Update to 5.20.0Po-Chuan Hsieh2023-05-275-566/+199
* biology/ncbi-blast+: Update to 2.14.0Jason W. Bacon2023-05-264-123/+827
* biology/py-pysam: unbundle biology/htslibRobert Clausecker2023-05-251-2/+6
* biology/seqtk: Update to 1.4Jason W. Bacon2023-05-232-4/+4
* biology/py-macs2: Update to 2.2.8Jason W. Bacon2023-05-222-5/+4
* biology/kmcp: Update 0.9.1 → 0.9.2Yuri Victorovich2023-05-212-7/+6
* biology/gff2ps: drop maintainershipVinícius Zavam2023-05-211-1/+1
* biology/biosoup: Update 0.10.0-2 → 0.11.0Yuri Victorovich2023-05-192-6/+4
* */*: llvm15 build fixesMuhammad Moinur Rahman2023-05-172-2/+2
* biology/wise: Unbreak on HEADMuhammad Moinur Rahman2023-05-141-6/+16
* biology/fastp: Update to 0.23.3Jason W. Bacon2023-05-142-5/+6
* biology/biosig: Unbreak on HEADMuhammad Moinur Rahman2023-05-121-1/+7
* biology/py-multiqc: Update to 1.14Jason W. Bacon2023-05-123-28/+15
* biology/phyml: fix build on non-x86Robert Clausecker2023-05-084-2/+100
* www/py-cachecontrol: Fix portPo-Chuan Hsieh2023-05-081-1/+1
* biology/minimap2: Update to 2.25Jason W. Bacon2023-04-293-10/+4
* biology/bedtools: Update to 2.31.0Jason W. Bacon2023-04-282-4/+4
* */*: bump all direct Boost cunsumersDima Panov2023-04-274-4/+4
* biology/py-resdk: Update 16.0.0 → 17.0.0Yuri Victorovich2023-04-272-5/+4
* audio/opus: bump consumers after update to 1.4Christian Weisgerber2023-04-256-5/+6
* *: Bump PORTREVISIONs for math/mpc update to 1.3.1Gerald Pfeifer2023-04-2353-28/+53
* devel/grpc: Update to 1.54.0 (should be part of 8f17596cf5a75f2dca4b4c9f65ba0...Po-Chuan Hsieh2023-04-201-1/+1
* biology/hyphy: Update to 2.5.50Joseph Mingrone2023-04-192-4/+4
* biology/htslib: fix build on armv7Robert Clausecker2023-04-183-0/+25
* biology/py-libsedml: Allow build with swig 4.1.0+Po-Chuan Hsieh2023-04-191-1/+12
* biology/py-libnuml: Allow build with swig 4.1.0+Po-Chuan Hsieh2023-04-191-1/+10
* biology/taxonkit: Update 0.14.1 → 0.14.2Yuri Victorovich2023-04-142-7/+6
* all: Bump PORTREVISION after lang/go{119,120} updateDmitri Goutnik2023-04-085-5/+5
* biology/libsbml: Update WWW and clean up pkg-descrPo-Chuan Hsieh2023-04-062-4/+3
* USE_PYTHON=pep517: bump PORTREVISIONAntoine Brodin2023-04-041-0/+1
* */*: Refactor java/openjdk7 removalMuhammad Moinur Rahman2023-04-042-2/+2
* biology/py-pybigwig: Update to 0.3.21Jason W. Bacon2023-04-012-4/+4
* */*: Sunset 12.3-RELEASE from ports tree12.3-eolMuhammad Moinur Rahman2023-03-301-10/+0
* biology/kmcp: fix build on i386 and riscv64Robert Clausecker2023-03-242-0/+20
* biology/hyphy: Update to 2.5.49Joseph Mingrone2023-03-242-5/+5
* biology/unikmer: fix build on riscv64Robert Clausecker2023-03-222-2/+10
* devel/grpc: Update to 1.52.1Po-Chuan Hsieh2023-03-221-1/+1
* biology/seqkit: fix build on riscv64Robert Clausecker2023-03-212-1/+10
* biology/py-scikit-bio: Update 0.5.7 → 0.5.8Yuri Victorovich2023-03-202-5/+5
* biology/py-scikit-bio: Update 0.5.7 → 0.5.7Yuri Victorovich2023-03-191-3/+9
* biology/py-pyrodigal: Update 2.0.3 → 2.1.0Yuri Victorovich2023-03-192-4/+4
* biology/diamond: Update to 2.1.6Joseph Mingrone2023-03-182-4/+4
* biology/seqkit: Update 2.3.1 → 2.4.0Yuri Victorovich2023-03-172-7/+6
* biology/py-dna-features-viewer: Update to 3.1.2Jason W. Bacon2023-03-172-4/+4
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