index
:
freebsd/ports.git
2014Q1
2014Q2
2014Q3
2014Q4
2015Q1
2015Q2
2015Q3
2015Q4
2016Q1
2016Q2
2016Q3
2016Q4
2017Q1
2017Q2
2017Q3
2017Q4
2018Q1
2018Q2
2018Q3
2018Q4
2019Q1
2019Q2
2019Q3
2019Q4
2020Q1
2020Q2
2020Q3
2020Q4
2021Q1
2021Q2
2021Q3
2021Q4
2022Q1
2022Q2
2022Q3
2022Q4
2023Q1
2023Q2
2023Q3
2023Q4
2024Q1
2024Q2
2024Q3
main
Unnamed repository; edit this file 'description' to name the repository.
git
summary
refs
log
tree
commit
diff
log msg
author
committer
range
path:
root
/
biology
(
follow
)
Commit message (
Expand
)
Author
Age
Files
Lines
*
biology/py-pybigwig: Update to 0.3.21
Jason W. Bacon
2023-04-01
2
-4
/
+4
*
*/*: Sunset 12.3-RELEASE from ports tree
12.3-eol
Muhammad Moinur Rahman
2023-03-30
1
-10
/
+0
*
biology/kmcp: fix build on i386 and riscv64
Robert Clausecker
2023-03-24
2
-0
/
+20
*
biology/hyphy: Update to 2.5.49
Joseph Mingrone
2023-03-24
2
-5
/
+5
*
biology/unikmer: fix build on riscv64
Robert Clausecker
2023-03-22
2
-2
/
+10
*
devel/grpc: Update to 1.52.1
Po-Chuan Hsieh
2023-03-22
1
-1
/
+1
*
biology/seqkit: fix build on riscv64
Robert Clausecker
2023-03-21
2
-1
/
+10
*
biology/py-scikit-bio: Update 0.5.7 → 0.5.8
Yuri Victorovich
2023-03-20
2
-5
/
+5
*
biology/py-scikit-bio: Update 0.5.7 → 0.5.7
Yuri Victorovich
2023-03-19
1
-3
/
+9
*
biology/py-pyrodigal: Update 2.0.3 → 2.1.0
Yuri Victorovich
2023-03-19
2
-4
/
+4
*
biology/diamond: Update to 2.1.6
Joseph Mingrone
2023-03-18
2
-4
/
+4
*
biology/seqkit: Update 2.3.1 → 2.4.0
Yuri Victorovich
2023-03-17
2
-7
/
+6
*
biology/py-dna-features-viewer: Update to 3.1.2
Jason W. Bacon
2023-03-17
2
-4
/
+4
*
biology/py-bcbio-gff: Update to 0.7.0
Jason W. Bacon
2023-03-16
2
-4
/
+4
*
biology/py-gtfparse: Update 1.2.1 → 1.3.0
Yuri Victorovich
2023-03-12
2
-4
/
+4
*
biology/py-gffutils: Update 0.11.0 → 0.11.1
Yuri Victorovich
2023-03-12
2
-5
/
+5
*
biology/ncbi-entrez-direct: fix build on riscv64
Robert Clausecker
2023-03-11
5
-9
/
+60
*
biology/py-biopython: Update to 1.81
Wen Heping
2023-03-10
2
-4
/
+4
*
all: Bump PORTREVISION after Go ports update
Dmitri Goutnik
2023-03-09
5
-5
/
+5
*
graphics/proj: Update to 9.2.0
Loïc Bartoletti
2023-03-09
1
-1
/
+1
*
PyQt: Update to latest versions
Loïc Bartoletti
2023-03-09
1
-1
/
+1
*
biology/py-pybigwig: Update to 0.3.20
Jason W. Bacon
2023-03-08
2
-4
/
+4
*
biology/fastx-toolkit: Unbreak build on 14-CURRENT
Jason W. Bacon
2023-03-07
3
-1
/
+13
*
biology/hyphy: Update to 2.5.48
Joseph Mingrone
2023-03-05
2
-4
/
+4
*
biology/diamond: Update to 2.1.4
Joseph Mingrone
2023-03-05
2
-4
/
+4
*
biology/fastqc: Update to 0.12.1
Jason W. Bacon
2023-03-04
3
-5
/
+47
*
accessibility/at-spi2-core: update to 2.46.0
Tobias C. Berner
2023-03-02
1
-0
/
+1
*
biology/bcf-score: Bcftools plugins for GWAS-VCF summary statistics
Jason W. Bacon
2023-02-25
7
-0
/
+110
*
biology/bcftools: Update to 1.17
Jason W. Bacon
2023-02-24
3
-4
/
+5
*
biology/samtools: Update to 1.17
Jason W. Bacon
2023-02-24
3
-4
/
+6
*
biology/htslib: Update to 1.17
Jason W. Bacon
2023-02-24
3
-32
/
+13
*
biology/diamond: Update to 2.1.3
Joseph Mingrone
2023-02-22
2
-4
/
+4
*
biology/diamond: Update to 2.1.2
Joseph Mingrone
2023-02-20
2
-4
/
+4
*
biology/igv: Update 2.9.4 → 2.16.0
Yuri Victorovich
2023-02-19
3
-54
/
+66
*
biology/atac-seq: Drop biology/igv dep
Jason W. Bacon
2023-02-19
1
-2
/
+1
*
biology/rna-seq: Drop biology/igv dep
Jason W. Bacon
2023-02-19
1
-2
/
+1
*
all: Bump PORTREVISION after lang/go{119,120} update
Dmitri Goutnik
2023-02-15
5
-5
/
+5
*
biology/diamond: Update to 2.1.1
Joseph Mingrone
2023-02-10
2
-4
/
+4
*
all: Bump PORTREVISION after GO_DEFAULT update.
Dmitri Goutnik
2023-02-09
5
-4
/
+5
*
biology/vcflib: Update to 1.0.7
Jason W. Bacon
2023-02-09
3
-8
/
+21
*
Revert "Mk/Uses/python.mk: Fix USE_PYTHON=pep517: always compile and install ...
Charlie Li
2023-02-05
1
-1
/
+0
*
Mk/Uses/python.mk: Fix USE_PYTHON=pep517: always compile and install bytecode
Po-Chuan Hsieh
2023-02-06
1
-0
/
+1
*
biology/hyphy: Update to 2.5.47
Joseph Mingrone
2023-02-03
2
-4
/
+4
*
biology/emboss: Ignore with mysql 8.0
Muhammad Moinur Rahman
2023-02-01
1
-0
/
+1
*
biology/vcflib: Unbreak build on aarch64, probably others
Jason W. Bacon
2023-01-31
2
-8
/
+9
*
biology/wfa2-lib: Unbreak build on aarch64, probably others
Jason W. Bacon
2023-01-31
2
-0
/
+12
*
biology/p5-transdecoder: Update to 5.7.0
Jason W. Bacon
2023-01-30
2
-5
/
+4
*
biology/vcflib: Update to 1.0.6
Jason W. Bacon
2023-01-30
4
-45
/
+28
*
biology/wfa2-lib: Exact gap-affine algorithm using homology
Jason W. Bacon
2023-01-30
6
-0
/
+89
*
biology/py-resdk: Update 15.0.0 → 16.0.0
Yuri Victorovich
2023-01-27
3
-6
/
+23
[next]