index
:
freebsd/ports.git
2014Q1
2014Q2
2014Q3
2014Q4
2015Q1
2015Q2
2015Q3
2015Q4
2016Q1
2016Q2
2016Q3
2016Q4
2017Q1
2017Q2
2017Q3
2017Q4
2018Q1
2018Q2
2018Q3
2018Q4
2019Q1
2019Q2
2019Q3
2019Q4
2020Q1
2020Q2
2020Q3
2020Q4
2021Q1
2021Q2
2021Q3
2021Q4
2022Q1
2022Q2
2022Q3
2022Q4
2023Q1
2023Q2
2023Q3
2023Q4
2024Q1
2024Q2
2024Q3
main
Unnamed repository; edit this file 'description' to name the repository.
git
summary
refs
log
tree
commit
diff
log msg
author
committer
range
path:
root
/
biology
(
follow
)
Commit message (
Expand
)
Author
Age
Files
Lines
*
Update devel/tbb to 2017.5
Ganael LAPLANCHE
2017-03-07
1
-0
/
+1
*
Mark the remaining ports depending on Google Code as DEPRECATED, with an
Mathieu Arnold
2017-03-03
1
-0
/
+2
*
- Update to 1.42
Wen Heping
2017-03-01
2
-4
/
+4
*
Fix USE_GITHUB's GH_TAGNAME usage.
Mathieu Arnold
2017-02-28
2
-5
/
+5
*
biology/plinkseq: unbreak with clang 4.0
Jan Beich
2017-02-27
2
-0
/
+12
*
biology/bowtie2: update to 2.3.0
Jan Beich
2017-02-27
4
-6
/
+48
*
Mark a few more ports that create large logfiles broken on armv6.
Mark Linimon
2017-02-26
1
-0
/
+2
*
Mark various ports as broken on armv6: invokes x86 asm.
Mark Linimon
2017-02-26
2
-0
/
+2
*
- Update to 1.14.9
Danilo Egea Gondolfo
2017-02-24
3
-6
/
+12
*
Move -fPIC to where Linux puts it so it is limited to a single library.
Tijl Coosemans
2017-02-13
2
-4
/
+2
*
biology/diamond: Update to version 0.8.36.
Joseph Mingrone
2017-02-12
2
-4
/
+4
*
biology/molden: Unbreak port, regenerate checksums, increment PORTREVISION.
Johannes M Dieterich
2017-02-11
2
-7
/
+5
*
Add -fPIC to various ports to enable them to build on armv6.
Mark Linimon
2017-02-09
1
-8
/
+3
*
- Mark BROKEN: does not fetch, size/checksum mismatch
Dmitry Marakasov
2017-02-07
1
-0
/
+2
*
Update to 1.5.1
Sunpoet Po-Chuan Hsieh
2017-02-06
2
-9
/
+8
*
biology/diamond: Update to version 0.8.35.
Joseph Mingrone
2017-02-05
2
-5
/
+5
*
Move devel/rubygem-bio to biology/rubygem-bio
Sunpoet Po-Chuan Hsieh
2017-02-05
4
-0
/
+36
*
Bump PORTREVISION for ports affected by the fix the last commit.
Mathieu Arnold
2017-01-31
3
-1
/
+3
*
Mark various ports broken on aarch64 and armv6.
Mark Linimon
2017-01-31
1
-0
/
+2
*
biology/diamond: Update to version 0.8.34.
Joseph Mingrone
2017-01-23
2
-4
/
+4
*
Update WWW: SF redirects to https://sourceforge.net/projects/<PROJECT_NAME>/
Sunpoet Po-Chuan Hsieh
2017-01-20
3
-3
/
+3
*
biology/diamond: Update to version 0.8.32.
Joseph Mingrone
2017-01-16
2
-4
/
+4
*
biology/diamond: Update to version 0.8.31.
Joseph Mingrone
2017-01-12
2
-4
/
+4
*
- Remove always-true/false conditions after FreeBSD 9, 10.1, 10.2 EOL
Dmitry Marakasov
2017-01-09
2
-15
/
+3
*
devel/boost-*: update to 1.63.0
Jan Beich
2017-01-06
1
-1
/
+1
*
Never set WRKSRC when using USE_GITHUB.
Mathieu Arnold
2017-01-03
2
-4
/
+0
*
Assume "pkg-config zlib" works after 9.x reached EOL
Jan Beich
2017-01-03
1
-3
/
+0
*
Remove BROKEN_FreeBSD_9
Sunpoet Po-Chuan Hsieh
2017-01-01
2
-3
/
+0
*
biology/diamond: Update to version 0.8.30
Joseph Mingrone
2016-12-30
2
-4
/
+4
*
biology/ncbi-blast+: Add MAKE_JOBS_UNSAFE
Joseph Mingrone
2016-12-22
1
-0
/
+2
*
- Update to 1.007001
Sunpoet Po-Chuan Hsieh
2016-12-20
2
-4
/
+4
*
biology/bowtie2: Update to version 2.2.9
Joseph Mingrone
2016-12-20
2
-14
/
+18
*
biology/cd-hit: Update to bug-fix release 4.6.6
Joseph Mingrone
2016-12-20
2
-5
/
+4
*
biology/jellyfish: Update to version 2.2.6
Joseph Mingrone
2016-12-19
3
-54
/
+56
*
- Update *_DEPENDS: Bio::Coordinate family has been moved from biology/p5-Bio...
Sunpoet Po-Chuan Hsieh
2016-12-19
1
-2
/
+4
*
- Add p5-Bio-Coordinate 1.007001
Sunpoet Po-Chuan Hsieh
2016-12-19
5
-0
/
+58
*
- Update to 1.007000
Sunpoet Po-Chuan Hsieh
2016-12-19
4
-20
/
+29
*
- Update to 1.007001
Sunpoet Po-Chuan Hsieh
2016-12-19
6
-383
/
+180
*
- Update to 2.5.0
Wen Heping
2016-12-19
5
-68
/
+190
*
- Update to 2.40
Sunpoet Po-Chuan Hsieh
2016-12-18
3
-10
/
+22
*
- Move biology/p5-bioperl-run to biology/p5-BioPerl-Run
Sunpoet Po-Chuan Hsieh
2016-12-18
6
-8
/
+10
*
- Add LICENSE_FILE
Sunpoet Po-Chuan Hsieh
2016-12-18
1
-2
/
+5
*
- Add LICENSE
Sunpoet Po-Chuan Hsieh
2016-12-18
1
-4
/
+8
*
- Add LICENSE
Sunpoet Po-Chuan Hsieh
2016-12-18
1
-1
/
+7
*
- Move biology/p5-bioperl to biology/p5-BioPerl
Sunpoet Po-Chuan Hsieh
2016-12-18
7
-9
/
+7
*
biology/diamond: Update to version 0.8.29
Joseph Mingrone
2016-12-18
2
-4
/
+4
*
biology/protomol: Support build with C++11 (taken from dports)
John Marino
2016-12-18
5
-0
/
+48
*
biology/blat: Fix build on DF (taken from dports)
John Marino
2016-12-18
1
-0
/
+14
*
biology/lamarc: Fix build on DF (taken from dports)
John Marino
2016-12-18
1
-0
/
+11
*
biology/chemeq: fix build on GCC (taken from dports)
John Marino
2016-12-18
1
-0
/
+11
[next]