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-rw-r--r--science/R-cran-eco/Makefile3
-rw-r--r--science/afni/Makefile2
-rw-r--r--science/afni/distinfo6
-rw-r--r--science/geant4/Makefile2
-rw-r--r--science/geant4/distinfo6
-rw-r--r--science/geant4/pkg-plist1
-rw-r--r--science/kalzium/distinfo6
-rw-r--r--science/mcpl/Makefile5
-rw-r--r--science/netcdf/pkg-plist2
-rw-r--r--science/step/distinfo6
10 files changed, 23 insertions, 16 deletions
diff --git a/science/R-cran-eco/Makefile b/science/R-cran-eco/Makefile
index 2967e9718267..8d881dd8cb0a 100644
--- a/science/R-cran-eco/Makefile
+++ b/science/R-cran-eco/Makefile
@@ -10,6 +10,9 @@ WWW= https://imai.princeton.edu/software/eco.html
LICENSE= GPLv2
+DEPRECATED= Unsupported upstream
+EXPIRATION_DATE=2025-06-14
+
USES= cran:auto-plist,compiles
.include <bsd.port.mk>
diff --git a/science/afni/Makefile b/science/afni/Makefile
index 3a0a04f9e0e3..4e81f12f071d 100644
--- a/science/afni/Makefile
+++ b/science/afni/Makefile
@@ -1,6 +1,6 @@
PORTNAME= afni
DISTVERSIONPREFIX= AFNI_
-DISTVERSION= 25.1.07
+DISTVERSION= 25.1.08
CATEGORIES= science biology graphics perl5 python
MAINTAINER= fernape@FreeBSD.org
diff --git a/science/afni/distinfo b/science/afni/distinfo
index c2fea4ad9338..cc36808f49c4 100644
--- a/science/afni/distinfo
+++ b/science/afni/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1746374195
-SHA256 (afni-afni-AFNI_25.1.07_GH0.tar.gz) = 16f7cfe8ede570045b115ef63e2d619e2cc0d9638068014b243520f74f7862ce
-SIZE (afni-afni-AFNI_25.1.07_GH0.tar.gz) = 53278589
+TIMESTAMP = 1746597097
+SHA256 (afni-afni-AFNI_25.1.08_GH0.tar.gz) = 300b83cee2f9e1bb3943a3eb5a2dcb18fecca9cb33f22bc2407789ca5c1631b6
+SIZE (afni-afni-AFNI_25.1.08_GH0.tar.gz) = 53278260
diff --git a/science/geant4/Makefile b/science/geant4/Makefile
index 3d527521a6fe..13a6e2808ff2 100644
--- a/science/geant4/Makefile
+++ b/science/geant4/Makefile
@@ -1,6 +1,6 @@
PORTNAME= geant4
DISTVERSIONPREFIX= v
-DISTVERSION= 11.3.1
+DISTVERSION= 11.3.2
CATEGORIES= science parallel devel cad
MASTER_SITES= https://cern.ch/geant4-data/releases/ \
https://cern.ch/geant4-data/datasets/:data
diff --git a/science/geant4/distinfo b/science/geant4/distinfo
index 7e8f7b7fdd31..bc419cb189e9 100644
--- a/science/geant4/distinfo
+++ b/science/geant4/distinfo
@@ -1,6 +1,6 @@
-TIMESTAMP = 1743342896
-SHA256 (geant4/geant4-v11.3.1.tar.gz) = c93ca996f6f35aa43f948ffcaba9603468df01deeb62f61c33ba769227c319fe
-SIZE (geant4/geant4-v11.3.1.tar.gz) = 36801325
+TIMESTAMP = 1746783497
+SHA256 (geant4/geant4-v11.3.2.tar.gz) = 892aedd7425262a50ac3d3c7117d81c0c0da4b408c6880dbaf5478b9301e488c
+SIZE (geant4/geant4-v11.3.2.tar.gz) = 36805069
SHA256 (geant4/G4ABLA.3.3.tar.gz) = 1e041b3252ee9cef886d624f753e693303aa32d7e5ef3bba87b34f36d92ea2b1
SIZE (geant4/G4ABLA.3.3.tar.gz) = 170253
SHA256 (geant4/G4CHANNELING.1.0.tar.gz) = 203e3c69984ca09acd181a1d31a9b0efafad4bc12e6c608f0b05e695120d67f2
diff --git a/science/geant4/pkg-plist b/science/geant4/pkg-plist
index e40687c69236..b04cb4eb627b 100644
--- a/science/geant4/pkg-plist
+++ b/science/geant4/pkg-plist
@@ -62660,6 +62660,7 @@ share/Geant4/examples/extended/hadronic/FlukaCern/FlukaInterface/source/fluka4_w
share/Geant4/examples/extended/hadronic/FlukaCern/FlukaInterface/source/fluka4_wrapper/cpp/procedures/flabrt.h
share/Geant4/examples/extended/hadronic/FlukaCern/FlukaInterface/source/fluka4_wrapper/cpp/procedures/oauxf.cc
share/Geant4/examples/extended/hadronic/FlukaCern/FlukaInterface/source/fluka4_wrapper/cpp/procedures/oauxf.h
+share/Geant4/examples/extended/hadronic/FlukaCern/FlukaInterface/source/fluka4_wrapper/fortran/procedures/declare_commons.f
share/Geant4/examples/extended/hadronic/FlukaCern/FlukaInterface/source/fluka4_wrapper/fortran/procedures/flabrw.f
share/Geant4/examples/extended/hadronic/FlukaCern/FlukaInterface/source/fluka4_wrapper/fortran/procedures/oauxfw.f
share/Geant4/examples/extended/hadronic/FlukaCern/FlukaInterface/source/fluka5/hadronic_interactions/interface_to_G4/cmcyl.hh
diff --git a/science/kalzium/distinfo b/science/kalzium/distinfo
index 3bafca5e4eb5..95a697f2ede1 100644
--- a/science/kalzium/distinfo
+++ b/science/kalzium/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1744564304
-SHA256 (KDE/release-service/25.04.0/kalzium-25.04.0.tar.xz) = 765728db14f834863fa3893f70d034d2a76b06aa4c86ce55f15bfd54437fd5f0
-SIZE (KDE/release-service/25.04.0/kalzium-25.04.0.tar.xz) = 22660532
+TIMESTAMP = 1746557949
+SHA256 (KDE/release-service/25.04.1/kalzium-25.04.1.tar.xz) = 31a31a45dc2d7c5581066d5e6654c2038e2c73b15126328170e39fdf361a1b64
+SIZE (KDE/release-service/25.04.1/kalzium-25.04.1.tar.xz) = 22660736
diff --git a/science/mcpl/Makefile b/science/mcpl/Makefile
index 7022caab1e3d..c9a1ab93c9d6 100644
--- a/science/mcpl/Makefile
+++ b/science/mcpl/Makefile
@@ -5,11 +5,14 @@ CATEGORIES= science # physics
MAINTAINER= yuri@FreeBSD.org
COMMENT= Monte Carlo Particle Lists library
-WWW= https://mctools.github.io/mcpl/
+WWW= https://mctools.github.io/mcpl/ \
+ https://github.com/mctools/mcpl
LICENSE= APACHE20
LICENSE_FILE= ${WRKSRC}/LICENSE
+BROKEN_i386= compilation fails, see https://github.com/mctools/mcpl/issues/88
+
USES= cmake:testing
USE_LDCONFIG= yes
diff --git a/science/netcdf/pkg-plist b/science/netcdf/pkg-plist
index 2ede00ae4346..07b90d8cc668 100644
--- a/science/netcdf/pkg-plist
+++ b/science/netcdf/pkg-plist
@@ -9,7 +9,7 @@ hdf5/lib/plugin/lib__nch5bzip2.so
hdf5/lib/plugin/lib__nch5deflate.so
hdf5/lib/plugin/lib__nch5fletcher32.so
hdf5/lib/plugin/lib__nch5shuffle.so
-hdf5/lib/plugin/lib__nch5szip.so
+%%SZIP%%hdf5/lib/plugin/lib__nch5szip.so
hdf5/lib/plugin/lib__nch5zstd.so
hdf5/lib/plugin/lib__nczhdf5filters.so
hdf5/lib/plugin/lib__nczstdfilters.so
diff --git a/science/step/distinfo b/science/step/distinfo
index acffc88cc8d6..977665fbfa43 100644
--- a/science/step/distinfo
+++ b/science/step/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1744564304
-SHA256 (KDE/release-service/25.04.0/step-25.04.0.tar.xz) = 811acf0f44bbbdfd9565feef92766fba7ca72cf1599d09ac3ba0cf5df5c7cde1
-SIZE (KDE/release-service/25.04.0/step-25.04.0.tar.xz) = 988020
+TIMESTAMP = 1746557950
+SHA256 (KDE/release-service/25.04.1/step-25.04.1.tar.xz) = bfc136ac296b613812d0c2e6979583b2c2856abc05ec605cf82ad2b4fb4f191d
+SIZE (KDE/release-service/25.04.1/step-25.04.1.tar.xz) = 988568