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-rw-r--r--misc/orange3/Makefile4
-rw-r--r--misc/pubs/Makefile4
-rw-r--r--misc/py-accelerate/Makefile3
-rw-r--r--misc/py-apache-beam/Makefile2
-rw-r--r--misc/py-huggingface-hub/Makefile3
-rw-r--r--misc/py-mmcv/Makefile3
-rw-r--r--misc/py-mmengine/Makefile3
-rw-r--r--misc/py-onnx-tf/Makefile4
-rw-r--r--misc/py-optuna/Makefile3
-rw-r--r--misc/py-papermill/Makefile4
-rw-r--r--misc/py-pytorch-lightning/Makefile3
-rw-r--r--misc/py-pytorch/Makefile4
-rw-r--r--misc/py-sigopt/Makefile3
-rw-r--r--misc/py-spdx-tools/Makefile3
-rw-r--r--misc/py-timm/Makefile3
-rw-r--r--misc/py-toil/Makefile3
-rw-r--r--misc/py-wandb/Makefile3
-rw-r--r--misc/pytorch/Makefile4
-rw-r--r--misc/snakemake/Makefile4
19 files changed, 37 insertions, 26 deletions
diff --git a/misc/orange3/Makefile b/misc/orange3/Makefile
index 990856e98b9a..486813ad8170 100644
--- a/misc/orange3/Makefile
+++ b/misc/orange3/Makefile
@@ -1,6 +1,6 @@
PORTNAME= orange3
DISTVERSION= 3.29.1
-PORTREVISION= 4
+PORTREVISION= 5
CATEGORIES= misc python
MAINTAINER= yuri@FreeBSD.org
@@ -37,7 +37,7 @@ RUN_DEPENDS= ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}serverfiles>0:misc/py-serverfiles@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}xlrd>=0.9.2:textproc/py-xlrd@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}XlsxWriter>0:textproc/py-xlsxwriter@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}yaml>0:devel/py-yaml@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}pyyaml>=0:devel/py-pyyaml@${PY_FLAVOR}
USES= python pyqt:5
USE_PYTHON= distutils cython autoplist noflavors
diff --git a/misc/pubs/Makefile b/misc/pubs/Makefile
index 02d69b245da8..d8aea4c9960b 100644
--- a/misc/pubs/Makefile
+++ b/misc/pubs/Makefile
@@ -1,7 +1,7 @@
PORTNAME= pubs
DISTVERSIONPREFIX= v
DISTVERSION= 0.9.0
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= misc python
MAINTAINER= yuri@FreeBSD.org
@@ -18,7 +18,7 @@ RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}beautifulsoup>0:www/py-beautifulsoup@${PY_FL
${PYTHON_PKGNAMEPREFIX}feedparser>0:textproc/py-feedparser@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}requests>0:www/py-requests@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}six>0:devel/py-six@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}yaml>0:devel/py-yaml@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}pyyaml>=0:devel/py-pyyaml@${PY_FLAVOR}
USES= python
USE_GITHUB= yes
diff --git a/misc/py-accelerate/Makefile b/misc/py-accelerate/Makefile
index 4964ef8169e3..25fdbddf6b6a 100644
--- a/misc/py-accelerate/Makefile
+++ b/misc/py-accelerate/Makefile
@@ -1,5 +1,6 @@
PORTNAME= accelerate
DISTVERSION= 0.32.1
+PORTREVISION= 1
CATEGORIES= misc # machine-learning
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -19,7 +20,7 @@ RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}huggingface-hub>0:misc/py-huggingface-hub@${
${PYTHON_PKGNAMEPREFIX}psutil>0:sysutils/py-psutil@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}pytorch>=1.10.0:misc/py-pytorch@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}safetensors>=0.3.1:misc/py-safetensors@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}yaml>0:devel/py-yaml@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}pyyaml>=0:devel/py-pyyaml@${PY_FLAVOR}
TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}parameterized>0:devel/py-parameterized@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}torchvision>0:misc/py-torchvision@${PY_FLAVOR}
diff --git a/misc/py-apache-beam/Makefile b/misc/py-apache-beam/Makefile
index 29b2f241f5b8..007bfa13f7ab 100644
--- a/misc/py-apache-beam/Makefile
+++ b/misc/py-apache-beam/Makefile
@@ -48,7 +48,7 @@ TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}freezegun>=0.3.12:devel/py-freezegun@${PY_F
${PYTHON_PKGNAMEPREFIX}tenacity>=5.0.2:devel/py-tenacity@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}scikit-learn>=0.20.0:science/py-scikit-learn@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}sqlalchemy14>=1.3:databases/py-sqlalchemy14@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}yaml>=3.12:devel/py-yaml@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}pyyaml>=3.12:devel/py-pyyaml@${PY_FLAVOR}
# testcontainers[mysql]>=3.0.3 is also required
USES= python zip
diff --git a/misc/py-huggingface-hub/Makefile b/misc/py-huggingface-hub/Makefile
index b732ba269dfe..40af797d4489 100644
--- a/misc/py-huggingface-hub/Makefile
+++ b/misc/py-huggingface-hub/Makefile
@@ -1,5 +1,6 @@
PORTNAME= huggingface-hub
DISTVERSION= 0.23.4
+PORTREVISION= 1
CATEGORIES= misc python
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -15,7 +16,7 @@ LICENSE_FILE= ${WRKSRC}/LICENSE
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}filelock>0:sysutils/py-filelock@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}fsspec>=2023.5.0:devel/py-fsspec@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}packaging>=20.9:devel/py-packaging@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}yaml>=5.1:devel/py-yaml@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}pyyaml>=5.1:devel/py-pyyaml@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}requests>0:www/py-requests@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}tqdm>=4.42.1:misc/py-tqdm@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}typing-extensions>=3.7.4.3:devel/py-typing-extensions@${PY_FLAVOR}
diff --git a/misc/py-mmcv/Makefile b/misc/py-mmcv/Makefile
index 6de8135c6d7e..e95de468aad7 100644
--- a/misc/py-mmcv/Makefile
+++ b/misc/py-mmcv/Makefile
@@ -1,6 +1,7 @@
PORTNAME= mmcv
#DISTVERSIONPREFIX= v
DISTVERSION= 2.2.0
+PORTREVISION= 1
CATEGORIES= misc # machine-learning
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -22,7 +23,7 @@ RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}addict>0:devel/py-addict@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}packaging>0:devel/py-packaging@${PY_FLAVOR} \
${PY_PILLOW} \
${PYTHON_PKGNAMEPREFIX}yapf>0:textproc/py-yapf@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}yaml>0:devel/py-yaml@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}pyyaml>=0:devel/py-pyyaml@${PY_FLAVOR}
USES= compiler:c++17-lang localbase python
USE_PYTHON= distutils cython autoplist # pytest: many test dependencies are missing
diff --git a/misc/py-mmengine/Makefile b/misc/py-mmengine/Makefile
index ebbe7b061df6..b0e666d4d175 100644
--- a/misc/py-mmengine/Makefile
+++ b/misc/py-mmengine/Makefile
@@ -1,6 +1,7 @@
PORTNAME= mmengine
DISTVERSIONPREFIX= v
DISTVERSION= 0.10.4
+PORTREVISION= 1
CATEGORIES= misc # machine-learning
#MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -18,7 +19,7 @@ RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}addict>0:devel/py-addict@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}rich>0:textproc/py-rich@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}termcolor>0:devel/py-termcolor@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}yapf>0:textproc/py-yapf@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}yaml>0:devel/py-yaml@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}pyyaml>=0:devel/py-pyyaml@${PY_FLAVOR}
USES= python
USE_PYTHON= distutils autoplist # pytest: many test dependencies are missing
diff --git a/misc/py-onnx-tf/Makefile b/misc/py-onnx-tf/Makefile
index 604833ccffef..8e62c95cf3e9 100644
--- a/misc/py-onnx-tf/Makefile
+++ b/misc/py-onnx-tf/Makefile
@@ -1,6 +1,6 @@
PORTNAME= onnx-tf
DISTVERSION= 1.10.0
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= misc python # machine-learning
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -13,7 +13,7 @@ LICENSE= APACHE20
LICENSE_FILE= ${WRKSRC}/LICENSE
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}onnx>0:misc/py-onnx@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}yaml>0:devel/py-yaml@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}pyyaml>=0:devel/py-pyyaml@${PY_FLAVOR}
USES= python
USE_PYTHON= distutils concurrent autoplist
diff --git a/misc/py-optuna/Makefile b/misc/py-optuna/Makefile
index 937ea459fe3f..e4e37980ad08 100644
--- a/misc/py-optuna/Makefile
+++ b/misc/py-optuna/Makefile
@@ -1,5 +1,6 @@
PORTNAME= optuna
DISTVERSION= 3.6.1
+PORTREVISION= 1
CATEGORIES= misc # machine-learning
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -19,7 +20,7 @@ RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}alembic>=1.5.0:databases/py-alembic@${PY_FLA
${PYTHON_PKGNAMEPREFIX}packaging>=20.0:devel/py-packaging@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}sqlalchemy14>=1.3.0:databases/py-sqlalchemy14@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}tqdm>0:misc/py-tqdm@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}yaml>0:devel/py-yaml@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}pyyaml>=0:devel/py-pyyaml@${PY_FLAVOR}
TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}coverage>=0:devel/py-coverage@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}fakeredis>=0:databases/py-fakeredis@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}moto>=0:devel/py-moto@${PY_FLAVOR} \
diff --git a/misc/py-papermill/Makefile b/misc/py-papermill/Makefile
index 3f0ef83777ce..497f9f7d819c 100644
--- a/misc/py-papermill/Makefile
+++ b/misc/py-papermill/Makefile
@@ -1,6 +1,6 @@
PORTNAME= papermill
DISTVERSION= 2.6.0
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= misc python
#MASTER_SITES= PYPI using the latest revision
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -20,7 +20,7 @@ RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}ansicolors>0:textproc/py-ansicolors@${PY_FLA
${PYTHON_PKGNAMEPREFIX}requests>0:www/py-requests@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}tenacity>=5.0.2:devel/py-tenacity@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}tqdm>=4.32.2:misc/py-tqdm@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}yaml>0:devel/py-yaml@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}pyyaml>=0:devel/py-pyyaml@${PY_FLAVOR}
TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}azure-datalake-store>=0.0.30:devel/py-azure-datalake-store@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}azure-storage-blob>=12.1.0:devel/py-azure-storage-blob@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}boto3>0:www/py-boto3@${PY_FLAVOR} \
diff --git a/misc/py-pytorch-lightning/Makefile b/misc/py-pytorch-lightning/Makefile
index 40fdae428f7c..40ab438d6be9 100644
--- a/misc/py-pytorch-lightning/Makefile
+++ b/misc/py-pytorch-lightning/Makefile
@@ -1,5 +1,6 @@
PORTNAME= pytorch-lightning
DISTVERSION= 2.3.2
+PORTREVISION= 1
CATEGORIES= misc python # machine-learning
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -21,7 +22,7 @@ RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}fsspec>=2022.5.0:devel/py-fsspec@${PY_FLAVOR
${PYTHON_PKGNAMEPREFIX}torchmetrics>=0.7.0:misc/py-torchmetrics@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}tqdm>=4.57.0:misc/py-tqdm@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}typing-extensions>=4.4.0:devel/py-typing-extensions@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}yaml>=5.4:devel/py-yaml@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}pyyaml>=5.4:devel/py-pyyaml@${PY_FLAVOR}
USES= python
USE_PYTHON= pep517 autoplist
diff --git a/misc/py-pytorch/Makefile b/misc/py-pytorch/Makefile
index d69d72d7887e..c259cedd4fa0 100644
--- a/misc/py-pytorch/Makefile
+++ b/misc/py-pytorch/Makefile
@@ -1,7 +1,7 @@
PORTNAME= pytorch
DISTVERSIONPREFIX= v
DISTVERSION= 2.3.1
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= misc # machine-learning
MASTER_SITES= https://github.com/pytorch/pytorch/releases/download/v${DISTVERSION}/
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -24,7 +24,7 @@ BUILD_DEPENDS= cmake:devel/cmake-core \
${PYNUMPY} \
${LOCALBASE}/include/fxdiv.h:devel/fxdiv \
${PYTHON_PKGNAMEPREFIX}typing-extensions>0:devel/py-typing-extensions@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}yaml>0:devel/py-yaml@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}pyyaml>=0:devel/py-pyyaml@${PY_FLAVOR}
LIB_DEPENDS= libabsl_flags.so:devel/abseil \
libblis.so:math/blis \
libmpi_cxx.so:net/openmpi4 \
diff --git a/misc/py-sigopt/Makefile b/misc/py-sigopt/Makefile
index 15b42a096259..bb28cf457214 100644
--- a/misc/py-sigopt/Makefile
+++ b/misc/py-sigopt/Makefile
@@ -1,5 +1,6 @@
PORTNAME= sigopt
DISTVERSION= 8.8.3
+PORTREVISION= 1
CATEGORIES= misc python # machine-learning
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -20,7 +21,7 @@ RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}backoff>=1.10.0:devel/py-backoff@${PY_FLAVOR
${PYTHON_PKGNAMEPREFIX}png>0:graphics/py-png@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}requests>=2.25.0:www/py-requests@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}urllib3>=1.26.5:net/py-urllib3@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}yaml>=5:devel/py-yaml@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}pyyaml>=5:devel/py-pyyaml@${PY_FLAVOR}
USES= python
USE_PYTHON= pep517 autoplist # pytest - missing dependencies, like hyperopt
diff --git a/misc/py-spdx-tools/Makefile b/misc/py-spdx-tools/Makefile
index fae1b2b1157f..b3fcfba595f3 100644
--- a/misc/py-spdx-tools/Makefile
+++ b/misc/py-spdx-tools/Makefile
@@ -1,5 +1,6 @@
PORTNAME= spdx-tools
DISTVERSION= 0.7.1
+PORTREVISION= 1
CATEGORIES= misc python
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -16,7 +17,7 @@ BUILD_DEPENDS= ${PY_SETUPTOOLS} \
${PYTHON_PKGNAMEPREFIX}wheel>=0:devel/py-wheel@${PY_FLAVOR}
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}click>=0:devel/py-click@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}yaml>=0:devel/py-yaml@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}pyyaml>=0:devel/py-pyyaml@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}xmltodict>=0:devel/py-xmltodict@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}rdflib>=0:textproc/py-rdflib@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}typeguard>=2.13.3:devel/py-typeguard@${PY_FLAVOR} \
diff --git a/misc/py-timm/Makefile b/misc/py-timm/Makefile
index 5cf9a3bec037..42a6cc722f48 100644
--- a/misc/py-timm/Makefile
+++ b/misc/py-timm/Makefile
@@ -1,5 +1,6 @@
PORTNAME= timm
DISTVERSION= 0.9.16
+PORTREVISION= 1
CATEGORIES= misc python # machine-learning
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -16,7 +17,7 @@ RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}huggingface-hub>=0:misc/py-huggingface-hub@$
${PYTHON_PKGNAMEPREFIX}pytorch>0:misc/py-pytorch@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}torchvision>0:misc/py-torchvision@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}safetensors>0:misc/py-safetensors@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}yaml>0:devel/py-yaml@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}pyyaml>=0:devel/py-pyyaml@${PY_FLAVOR}
TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}expecttest>0:devel/py-expecttest@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}pytest-forked>0:devel/py-pytest-forked@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}pytest-timeout>0:devel/py-pytest-timeout@${PY_FLAVOR} \
diff --git a/misc/py-toil/Makefile b/misc/py-toil/Makefile
index c5308ae9cfe6..d63b4572d0d4 100644
--- a/misc/py-toil/Makefile
+++ b/misc/py-toil/Makefile
@@ -1,5 +1,6 @@
PORTNAME= toil
DISTVERSION= 7.0.0
+PORTREVISION= 1
CATEGORIES= misc python
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -25,7 +26,7 @@ RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}addict>=2.2.1:devel/py-addict@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}tes>0:misc/py-tes@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}typing-extensions>=4.6.2:devel/py-typing-extensions@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}urllib3>=1.26.0:net/py-urllib3@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}yaml>=6:devel/py-yaml@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}pyyaml>=6:devel/py-pyyaml@${PY_FLAVOR}
#RUN_DEPENDS+= ${PYTHON_PKGNAMEPREFIX}mypy-boto3-s3>=1.28.3:devel/py-mypy-boto3-s3@${PY_FLAVOR} \
# ${PYTHON_PKGNAMEPREFIX}boto3-stubs>=1.28.3:www/py-boto3-stubs@${PY_FLAVOR} \
# ${PYTHON_PKGNAMEPREFIX}moto>=5.0.3:devel/py-moto@${PY_FLAVOR}
diff --git a/misc/py-wandb/Makefile b/misc/py-wandb/Makefile
index 0f58f45a821d..6c7e3567ec25 100644
--- a/misc/py-wandb/Makefile
+++ b/misc/py-wandb/Makefile
@@ -1,6 +1,7 @@
PORTNAME= wandb
DISTVERSIONPREFIX= v
DISTVERSION= 0.17.4
+PORTREVISION= 1
CATEGORIES= misc # machine-learning
#MASTER_SITES= PYPI # no tests
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -30,7 +31,7 @@ RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}appdirs>=1.4.3:devel/py-appdirs@${PY_FLAVOR}
${PYTHON_PKGNAMEPREFIX}requests>=2.0.0,<3:www/py-requests@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}sentry-sdk>=1.0.0:devel/py-sentry-sdk@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}setproctitle>0:devel/py-setproctitle@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}yaml>0:devel/py-yaml@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}pyyaml>=0:devel/py-pyyaml@${PY_FLAVOR}
RUN_DEPENDS+= ${PYTHON_PKGNAMEPREFIX}boto3>0:www/py-boto3@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}plotly>0:graphics/py-plotly@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}pydantic>0:devel/py-pydantic@${PY_FLAVOR} \
diff --git a/misc/pytorch/Makefile b/misc/pytorch/Makefile
index 7ec1e06209a3..6b7859879002 100644
--- a/misc/pytorch/Makefile
+++ b/misc/pytorch/Makefile
@@ -1,7 +1,7 @@
PORTNAME= pytorch
DISTVERSIONPREFIX= v
DISTVERSION= 2.3.1
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= misc # machine-learning
MASTER_SITES= https://github.com/pytorch/pytorch/releases/download/v${DISTVERSION}/
DIST_SUBDIR= ${PORTNAME}
@@ -51,7 +51,7 @@ OPTIONS_SUB= yes
PYTHON_CMAKE_BOOL= BUILD_PYTHON
PYTHON_PY_DEPENDS= ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}typing-extensions>0:devel/py-typing-extensions@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}yaml>0:devel/py-yaml@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}pyyaml>=0:devel/py-pyyaml@${PY_FLAVOR}
PYTHON_BUILD_DEPENDS= ${PYTHON_PY_DEPENDS} \
${PY_SETUPTOOLS} \
pybind11>0:devel/pybind11
diff --git a/misc/snakemake/Makefile b/misc/snakemake/Makefile
index 902dd4689ca4..3e011231a5ab 100644
--- a/misc/snakemake/Makefile
+++ b/misc/snakemake/Makefile
@@ -1,6 +1,6 @@
PORTNAME= snakemake
DISTVERSION= 6.15.5
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= misc python
MASTER_SITES= PYPI
@@ -28,7 +28,7 @@ RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}appdirs>0:devel/py-appdirs@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}tabulate>0:devel/py-tabulate@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}toposort>0:devel/py-toposort@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}wrapt>0:devel/py-wrapt@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}yaml>0:devel/py-yaml@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}pyyaml>=0:devel/py-pyyaml@${PY_FLAVOR}
USES= python
USE_PYTHON= distutils noflavors autoplist