diff options
Diffstat (limited to 'math')
33 files changed, 107 insertions, 205 deletions
diff --git a/math/Makefile b/math/Makefile index 5be7d12943d1..6b53c1230054 100644 --- a/math/Makefile +++ b/math/Makefile @@ -641,7 +641,6 @@ SUBDIR += octave-forge-octproj SUBDIR += octave-forge-odbc SUBDIR += octave-forge-odebvp - SUBDIR += octave-forge-onsas SUBDIR += octave-forge-optics SUBDIR += octave-forge-optim SUBDIR += octave-forge-optiminterp diff --git a/math/R-cran-proxy/Makefile b/math/R-cran-proxy/Makefile index 8df4a72bf614..851667b01f92 100644 --- a/math/R-cran-proxy/Makefile +++ b/math/R-cran-proxy/Makefile @@ -1,6 +1,5 @@ PORTNAME= proxy -DISTVERSION= 0.4-27 -PORTREVISION= 1 +DISTVERSION= 0.4-28 CATEGORIES= math DISTNAME= ${PORTNAME}_${DISTVERSION} @@ -8,7 +7,7 @@ MAINTAINER= tota@FreeBSD.org COMMENT= Distance and Similarity Measures WWW= https://cran.r-project.org/web/packages/proxy/ -LICENSE= GPLv2 +LICENSE= GPLv2+ USES= cran:auto-plist,compiles diff --git a/math/R-cran-proxy/distinfo b/math/R-cran-proxy/distinfo index e51d3839e183..68ca417ec9ef 100644 --- a/math/R-cran-proxy/distinfo +++ b/math/R-cran-proxy/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1654826819 -SHA256 (proxy_0.4-27.tar.gz) = 249991a4c4d70ad139e93f3a24e17f161ad1ec854951813ea192daf79478563f -SIZE (proxy_0.4-27.tar.gz) = 74622 +TIMESTAMP = 1765693628 +SHA256 (proxy_0.4-28.tar.gz) = 5907a82f4b6793ec373c056f3b3b5460f231d17df1814d20976133f5ae81b8fe +SIZE (proxy_0.4-28.tar.gz) = 68931 diff --git a/math/armadillo/Makefile b/math/armadillo/Makefile index 8087661da7c8..2735d28594db 100644 --- a/math/armadillo/Makefile +++ b/math/armadillo/Makefile @@ -14,7 +14,7 @@ LICENSE_FILE= ${WRKSRC}/LICENSE.txt LIB_DEPENDS= libarpack.so:math/arpack-ng \ libsuperlu.so:math/superlu -USES= blaslapack:openblas cmake:testing compiler:c++11-lang pathfix pkgconfig tar:xz +USES= blaslapack:openblas cmake:testing compiler:c++11-lang pkgconfig tar:xz CMAKE_OFF= ALLOW_BLAS_LAPACK_MACOS \ ALLOW_FLEXIBLAS_LINUX \ diff --git a/math/cvc5/Makefile b/math/cvc5/Makefile index 81e7f5221854..ec88a324565d 100644 --- a/math/cvc5/Makefile +++ b/math/cvc5/Makefile @@ -1,6 +1,6 @@ PORTNAME= cvc5 DISTVERSIONPREFIX= cvc5- -DISTVERSION= 1.3.1 +DISTVERSION= 1.3.2 CATEGORIES= math java EXTRACT_ONLY= ${DISTNAME}${EXTRACT_SUFX} @@ -39,12 +39,12 @@ CMAKE_TESTING_TARGET= check # check target runs only quick tests (based on https PLIST_SUB= VERSION=${DISTVERSION} -OPTIONS_DEFINE= COCOALIB EDITLINE JAVA +OPTIONS_DEFINE= COCOALIB EDITLINE GLPK JAVA POLY OPTIONS_GROUP= SOLVERS -OPTIONS_GROUP_SOLVERS= CRYPTOMINISAT GLPK KISSAT +OPTIONS_GROUP_SOLVERS= CRYPTOMINISAT KISSAT OPTIONS_RADIO= NUMLIB OPTIONS_RADIO_NUMLIB= GMP CLN -OPTIONS_DEFAULT= CRYPTOMINISAT EDITLINE GMP KISSAT # COCOALIB # JAVA is broken +OPTIONS_DEFAULT= CRYPTOMINISAT EDITLINE GMP KISSAT # COCOALIB GLPK JAVA POLY are broken OPTIONS_SUB= yes COCOALIB_DESC= Use CoCoALib for further polynomial operations @@ -63,12 +63,22 @@ EDITLINE_CMAKE_BOOL= USE_EDITLINE EDITLINE_BUILD_DEPENDS= libedit>0:devel/libedit EDITLINE_RUN_DEPENDS= libedit>0:devel/libedit +POLY_DESC= Use LibPoly for polynomial arithmetic +POLY_CMAKE_BOOL= USE_POLY +POLY_LIB_DEPENDS= libpoly.so:math/libpoly +POLY_BROKEN= compilation fails with libpoly API mismatch, see poly_conversion.cpp:250 + # SOLVERS options CRYPTOMINISAT_DESC= Use CryptoMiniSat as the SAT solver CRYPTOMINISAT_CMAKE_BOOL= USE_CRYPTOMINISAT CRYPTOMINISAT_LIB_DEPENDS= libcryptominisat5.so:math/cryptominisat +GLPK_DESC= Use GLPK simplex solver +GLPK_CMAKE_BOOL= USE_GLPK +GLPK_LIB_DEPENDS= libglpk.so:math/glpk +GLPK_BROKEN= requires GLPK-cut-log patch, see cmake/deps-utils/glpk-cut-log.patch + KISSAT_DESC= Use Kissat solver KISSAT_CMAKE_BOOL= USE_KISSAT KISSAT_LIB_DEPENDS= libkissat.so:math/kissat @@ -93,5 +103,6 @@ CMAKE_ARGS+= -DENABLE_GPL:BOOL=ON PORTSCOUT= limit:^[1-9]\.[0-9]+\.[0-9]+ # prevent older generation versions like 1.8, 1.7, etc. # tests as of 1.3.1: 1 test fails, see https://github.com/cvc5/cvc5/issues/12215 +# tests as of 1.3.2: 100% tests passed, 0 tests failed out of 4115, see https://github.com/cvc5/cvc5/issues/12215 .include <bsd.port.mk> diff --git a/math/cvc5/distinfo b/math/cvc5/distinfo index 2f080a92c278..c8a1488c0525 100644 --- a/math/cvc5/distinfo +++ b/math/cvc5/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1762288360 -SHA256 (cvc5-cvc5-cvc5-1.3.1_GH0.tar.gz) = ce1dce7b1ba8ade0ba7937b8ad7aa6ffa1df0dd9586963ead082baa299ef32d5 -SIZE (cvc5-cvc5-cvc5-1.3.1_GH0.tar.gz) = 9205045 +TIMESTAMP = 1765845301 +SHA256 (cvc5-cvc5-cvc5-1.3.2_GH0.tar.gz) = 85a9cc4e1f80efcdb235e89c9f361c74b1089023ceb43f38c2d5e73a4e2db47e +SIZE (cvc5-cvc5-cvc5-1.3.2_GH0.tar.gz) = 9250970 diff --git a/math/elan/Makefile b/math/elan/Makefile index 33059114d8a2..4033eec084f6 100644 --- a/math/elan/Makefile +++ b/math/elan/Makefile @@ -1,7 +1,7 @@ PORTNAME= elan DISTVERSIONPREFIX= v DISTVERSION= 4.0.1 -PORTREVISION= 5 +PORTREVISION= 6 CATEGORIES= math MAINTAINER= yuri@FreeBSD.org diff --git a/math/fend/Makefile b/math/fend/Makefile index 2f82de844352..7ee592f1371f 100644 --- a/math/fend/Makefile +++ b/math/fend/Makefile @@ -1,7 +1,7 @@ PORTNAME= fend DISTVERSIONPREFIX= v DISTVERSION= 1.5.7 -PORTREVISION= 3 +PORTREVISION= 4 CATEGORIES= math MAINTAINER= yuri@FreeBSD.org diff --git a/math/hpcombi/Makefile b/math/hpcombi/Makefile index a8b54d9fad87..5c5a6ee21a88 100644 --- a/math/hpcombi/Makefile +++ b/math/hpcombi/Makefile @@ -1,5 +1,5 @@ PORTNAME= HPCombi -PORTVERSION= 1.1.0 +PORTVERSION= 1.1.1 DISTVERSIONPREFIX= v CATEGORIES= math devel diff --git a/math/hpcombi/distinfo b/math/hpcombi/distinfo index d438f5234c12..3a3fc3326717 100644 --- a/math/hpcombi/distinfo +++ b/math/hpcombi/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1743960204 -SHA256 (hivert-HPCombi-v1.1.0_GH0.tar.gz) = f07b55a54109b21546fa6c10d434c027c2911bb5664dfcee1b3cd2e3baa786b2 -SIZE (hivert-HPCombi-v1.1.0_GH0.tar.gz) = 3129040 +TIMESTAMP = 1765814524 +SHA256 (hivert-HPCombi-v1.1.1_GH0.tar.gz) = 6987e5c6c2db0f2f4ac3a103fb335bc95331515990f9bdd6ac74adcb1864a805 +SIZE (hivert-HPCombi-v1.1.1_GH0.tar.gz) = 3517207 diff --git a/math/hpcombi/pkg-plist b/math/hpcombi/pkg-plist index 0e42e2dd9035..1a1bcb214925 100644 --- a/math/hpcombi/pkg-plist +++ b/math/hpcombi/pkg-plist @@ -13,27 +13,28 @@ include/hpcombi/perm16_impl.hpp include/hpcombi/perm_generic.hpp include/hpcombi/perm_generic_impl.hpp include/hpcombi/power.hpp -include/hpcombi/simde/arm/neon.h -include/hpcombi/simde/arm/sve.h -include/hpcombi/simde/mips/msa.h -include/hpcombi/simde/wasm/relaxed-simd.h -include/hpcombi/simde/wasm/simd128.h -include/hpcombi/simde/x86/avx.h -include/hpcombi/simde/x86/avx2.h -include/hpcombi/simde/x86/avx512.h -include/hpcombi/simde/x86/clmul.h -include/hpcombi/simde/x86/f16c.h -include/hpcombi/simde/x86/fma.h -include/hpcombi/simde/x86/gfni.h -include/hpcombi/simde/x86/mmx.h -include/hpcombi/simde/x86/sse.h -include/hpcombi/simde/x86/sse2.h -include/hpcombi/simde/x86/sse3.h -include/hpcombi/simde/x86/sse4.1.h -include/hpcombi/simde/x86/sse4.2.h -include/hpcombi/simde/x86/ssse3.h -include/hpcombi/simde/x86/svml.h -include/hpcombi/simde/x86/xop.h +include/hpcombi/simde-0.8.2/arm/neon.h +include/hpcombi/simde-0.8.2/arm/sve.h +include/hpcombi/simde-0.8.2/mips/msa.h +include/hpcombi/simde-0.8.2/wasm/relaxed-simd.h +include/hpcombi/simde-0.8.2/wasm/simd128.h +include/hpcombi/simde-0.8.2/x86/aes.h +include/hpcombi/simde-0.8.2/x86/avx.h +include/hpcombi/simde-0.8.2/x86/avx2.h +include/hpcombi/simde-0.8.2/x86/avx512.h +include/hpcombi/simde-0.8.2/x86/clmul.h +include/hpcombi/simde-0.8.2/x86/f16c.h +include/hpcombi/simde-0.8.2/x86/fma.h +include/hpcombi/simde-0.8.2/x86/gfni.h +include/hpcombi/simde-0.8.2/x86/mmx.h +include/hpcombi/simde-0.8.2/x86/sse.h +include/hpcombi/simde-0.8.2/x86/sse2.h +include/hpcombi/simde-0.8.2/x86/sse3.h +include/hpcombi/simde-0.8.2/x86/sse4.1.h +include/hpcombi/simde-0.8.2/x86/sse4.2.h +include/hpcombi/simde-0.8.2/x86/ssse3.h +include/hpcombi/simde-0.8.2/x86/svml.h +include/hpcombi/simde-0.8.2/x86/xop.h include/hpcombi/vect16.hpp include/hpcombi/vect_generic.hpp libdata/pkgconfig/hpcombi.pc @@ -69,10 +70,10 @@ libdata/pkgconfig/hpcombi.pc %%DOXYGEN%%%%DOCSDIR%%/closed.png %%DOXYGEN%%%%DOCSDIR%%/debug_8hpp.html %%DOXYGEN%%%%DOCSDIR%%/debug_8hpp_source.html -%%DOXYGEN%%%%DOCSDIR%%/dir_34ca627235a89065f8c5a695cac9ddab.html -%%DOXYGEN%%%%DOCSDIR%%/dir_9431461fe4fc1b38bb4fd222da4da8e5.html -%%DOXYGEN%%%%DOCSDIR%%/dir_ba740b1b6c5af4004c3573360476ab5b.html -%%DOXYGEN%%%%DOCSDIR%%/dir_e001190c0b571bfe7ca10db4d849015c.html +%%DOXYGEN%%%%DOCSDIR%%/dir_0c3936d75fb7de070c6bfec10ff2cf55.html +%%DOXYGEN%%%%DOCSDIR%%/dir_16159a270efdabcd442030a08e20a6fe.html +%%DOXYGEN%%%%DOCSDIR%%/dir_25db0f30f44cb0f96892112789cf4aee.html +%%DOXYGEN%%%%DOCSDIR%%/dir_fe1e55dd4e1af501eb772862e06be18d.html %%DOXYGEN%%%%DOCSDIR%%/doc.png %%DOXYGEN%%%%DOCSDIR%%/docd.png %%DOXYGEN%%%%DOCSDIR%%/doxygen.css diff --git a/math/jtransforms/files/patch-build.xml b/math/jtransforms/files/patch-build.xml new file mode 100644 index 000000000000..4e3db0569b9e --- /dev/null +++ b/math/jtransforms/files/patch-build.xml @@ -0,0 +1,22 @@ +--- build.xml.orig 2025-12-13 15:21:46 UTC ++++ build.xml +@@ -57,15 +57,15 @@ +
+ <target name="javac" depends="clean" description="Compilation of java classes and unit-tests">
+ <mkdir dir="${javac.dest}" />
+- <javac srcdir="${javac.src}" destdir="${javac.dest}" includes="**/*.java" includeantruntime="false" deprecation="true" debug="false" source="1.5" target="1.5" />
+- <javac srcdir="${tests.src.dir}" destdir="${javac.dest}" includes="**/*.java" classpathref="project.class.path" includeantruntime="false" deprecation="true" debug="false" source="1.5" target="1.5" />
++ <javac srcdir="${javac.src}" destdir="${javac.dest}" includes="**/*.java" includeantruntime="false" deprecation="true" debug="false" />
++ <javac srcdir="${tests.src.dir}" destdir="${javac.dest}" includes="**/*.java" classpathref="project.class.path" includeantruntime="false" deprecation="true" debug="false" />
+ </target>
+
+
+ <target name="javac-debug" depends="clean" description="Compilation of java classes and unit-tests with debug options on.">
+ <mkdir dir="${javac.dest}" />
+- <javac srcdir="${javac.src}" destdir="${javac.dest}" includes="**/*.java" includeantruntime="false" deprecation="true" debug="on" debuglevel="vars,lines,source" source="1.5" target="1.5" />
+- <javac srcdir="${tests.src.dir}" destdir="${javac.dest}" includes="**/*.java" classpathref="project.class.path" includeantruntime="false" deprecation="true" debug="true" debuglevel="vars,lines,source" source="1.5" target="1.5" />
++ <javac srcdir="${javac.src}" destdir="${javac.dest}" includes="**/*.java" includeantruntime="false" deprecation="true" debug="on" debuglevel="vars,lines,source" />
++ <javac srcdir="${tests.src.dir}" destdir="${javac.dest}" includes="**/*.java" classpathref="project.class.path" includeantruntime="false" deprecation="true" debug="true" debuglevel="vars,lines,source" />
+ </target>
+
+
diff --git a/math/kalc/Makefile b/math/kalc/Makefile index 5551f574b857..97cef4e9418f 100644 --- a/math/kalc/Makefile +++ b/math/kalc/Makefile @@ -1,7 +1,7 @@ PORTNAME= kalc DISTVERSIONPREFIX= v DISTVERSION= 1.5.0 -PORTREVISION= 5 +PORTREVISION= 6 CATEGORIES= math PKGNAMESUFFIX= -calculator diff --git a/math/kalker/Makefile b/math/kalker/Makefile index cbcf782a8b9d..640c2ffdd585 100644 --- a/math/kalker/Makefile +++ b/math/kalker/Makefile @@ -1,7 +1,7 @@ PORTNAME= kalker DISTVERSIONPREFIX= v DISTVERSION= 2.2.1 -PORTREVISION= 10 +PORTREVISION= 11 CATEGORIES= math MAINTAINER= ashish@FreeBSD.org diff --git a/math/octave-forge-onsas/Makefile b/math/octave-forge-onsas/Makefile deleted file mode 100644 index fc8171c52186..000000000000 --- a/math/octave-forge-onsas/Makefile +++ /dev/null @@ -1,27 +0,0 @@ -PORTNAME= octave-forge-onsas -DISTVERSIONPREFIX= v -DISTVERSION= 0.2.5 -PORTREVISION= 1 -PORTEPOCH= 1 -CATEGORIES= math - -MAINTAINER= stephen@FreeBSD.org -COMMENT= Octave-forge package ${OCTAVE_PKGNAME} -WWW= https://packages.octave.org/ - -LICENSE= GPLv3 -LICENSE_FILE= ${WRKDIR}/${OCTAVE_SRC}/COPYING - -BROKEN= this software is incompatible with octave pkg - -USES= octave -USE_GITHUB= yes -GH_ACCOUNT= ONSAS -GH_PROJECT= ONSAS.m - -OCTAVE_SRC= ${GH_ACCOUNT}-${DISTVERSION} - -NO_ARCH = yes -NO_BUILD= yes - -.include <bsd.port.mk> diff --git a/math/octave-forge-onsas/distinfo b/math/octave-forge-onsas/distinfo deleted file mode 100644 index 37f3e8eec68e..000000000000 --- a/math/octave-forge-onsas/distinfo +++ /dev/null @@ -1,3 +0,0 @@ -TIMESTAMP = 1735869418 -SHA256 (octave-forge/ONSAS-ONSAS.m-v0.2.5_GH0.tar.gz) = 537c14f7ad920601dc9d1538fd54a6cc5faef86c778cd3ad6337dff3b8003d86 -SIZE (octave-forge/ONSAS-ONSAS.m-v0.2.5_GH0.tar.gz) = 1644546 diff --git a/math/octave-forge-onsas/files/patch-DESCRIPTION b/math/octave-forge-onsas/files/patch-DESCRIPTION deleted file mode 100644 index ea9f7bd8dfb4..000000000000 --- a/math/octave-forge-onsas/files/patch-DESCRIPTION +++ /dev/null @@ -1,9 +0,0 @@ ---- ../DESCRIPTION.orig 2025-01-25 12:54:46.986090000 -0600 -+++ ../DESCRIPTION 2025-01-25 12:54:54.809288000 -0600 -@@ -1,5 +1,5 @@ - Name: ONSAS --Version: 0.2.4 -+Version: 0.2.5 - Date: 2022-08-02 - Author: Pérez Zerpa, Jorge M. and Bazzano García, Juan Bruno and Viera Sosa, Joaquin and Vanzulli Pena, Mauricio and Forets, Marcelo and Battini, Jean-Marc and Toro, Sebastián - Maintainer: Pérez Zerpa, Jorge M. (jorgepz@fing.edu.uy) diff --git a/math/octave-forge-onsas/pkg-descr b/math/octave-forge-onsas/pkg-descr deleted file mode 100644 index e98f4c5abbed..000000000000 --- a/math/octave-forge-onsas/pkg-descr +++ /dev/null @@ -1,10 +0,0 @@ -The octave-forge package is the result of The GNU Octave Repository project, -which is intended to be a central location for custom scripts, functions and -extensions for GNU Octave. contains the source for all the functions plus -build and install scripts. - -This is onsas. - - ONSAS is an Open Nonlinear Structural Analysis Solver. It is a GNU-Octave -code for static/dynamic and linear/non-linear analysis of structures formed -by solid, beam, truss or plane components. diff --git a/math/octave-forge-sqlite/Makefile b/math/octave-forge-sqlite/Makefile index a6fbd94ffc46..5ccf90d10e19 100644 --- a/math/octave-forge-sqlite/Makefile +++ b/math/octave-forge-sqlite/Makefile @@ -1,6 +1,6 @@ PORTNAME= octave-forge-sqlite DISTVERSIONPREFIX= v -DISTVERSION= 0.1.1 +DISTVERSION= 0.1.2 CATEGORIES= math MAINTAINER= stephen@FreeBSD.org diff --git a/math/octave-forge-sqlite/distinfo b/math/octave-forge-sqlite/distinfo index 34b3b2b703f2..3fb39a50dcf7 100644 --- a/math/octave-forge-sqlite/distinfo +++ b/math/octave-forge-sqlite/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1760302134 -SHA256 (octave-forge/gnu-octave-octave-sqlite-v0.1.1_GH0.tar.gz) = 3144ad58c842b1bd4c2bb758141a8732f89b9f57a8aaafee0d8f62a9fbc6010a -SIZE (octave-forge/gnu-octave-octave-sqlite-v0.1.1_GH0.tar.gz) = 106259 +TIMESTAMP = 1766032961 +SHA256 (octave-forge/gnu-octave-octave-sqlite-v0.1.2_GH0.tar.gz) = ecfec5d1687843dd2913a9ef351be6dc740180d0f70df08e9393c8b75821656d +SIZE (octave-forge/gnu-octave-octave-sqlite-v0.1.2_GH0.tar.gz) = 106492 diff --git a/math/py-arviz/Makefile b/math/py-arviz/Makefile index d262be7a0339..91dde4a4df51 100644 --- a/math/py-arviz/Makefile +++ b/math/py-arviz/Makefile @@ -1,7 +1,6 @@ PORTNAME= arviz DISTVERSIONPREFIX= v -DISTVERSION= 0.22.0 -PORTREVISION= 1 +DISTVERSION= 0.23.0 CATEGORIES= math python #MASTER_SITES= PYPI # missing test files PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} diff --git a/math/py-arviz/distinfo b/math/py-arviz/distinfo index 7d6daefbbffb..74fca6abdf89 100644 --- a/math/py-arviz/distinfo +++ b/math/py-arviz/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1752189724 -SHA256 (arviz-devs-arviz-v0.22.0_GH0.tar.gz) = 69f63ef24118bf6d82069658cb20ae1ae69ffe56472e04be7db6731b9568a367 -SIZE (arviz-devs-arviz-v0.22.0_GH0.tar.gz) = 11415945 +TIMESTAMP = 1765877975 +SHA256 (arviz-devs-arviz-v0.23.0_GH0.tar.gz) = 9c2042f3b5b8096db577794cad72788e9a79d89002960aed6146076036c1ab84 +SIZE (arviz-devs-arviz-v0.23.0_GH0.tar.gz) = 11445046 diff --git a/math/py-clarabel/Makefile b/math/py-clarabel/Makefile index 9a460d955966..94785119ce33 100644 --- a/math/py-clarabel/Makefile +++ b/math/py-clarabel/Makefile @@ -1,7 +1,7 @@ PORTNAME= clarabel DISTVERSIONPREFIX= v DISTVERSION= 0.9.0 -PORTREVISION= 12 +PORTREVISION= 13 CATEGORIES= math python #MASTER_SITES= PYPI PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} diff --git a/math/py-pandas/Makefile b/math/py-pandas/Makefile index 44476ac761f2..3a2987ebc5c7 100644 --- a/math/py-pandas/Makefile +++ b/math/py-pandas/Makefile @@ -72,7 +72,7 @@ XLWT_DESC= Write MS Excel with textproc/py-xlwt ALCHEMY14_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}sqlalchemy14>0:databases/py-sqlalchemy14@${PY_FLAVOR} ALCHEMY20_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}sqlalchemy20>0:databases/py-sqlalchemy20@${PY_FLAVOR} -BOTO_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}boto>0:devel/py-boto@${PY_FLAVOR} +BOTO_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}boto3>0:www/py-boto3@${PY_FLAVOR} BTLNCK_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}bottleneck>=1.2.0:math/py-bottleneck@${PY_FLAVOR} HTML5LIB_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}beautifulsoup>=4.2.1:www/py-beautifulsoup@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}html5lib>0:www/py-html5lib@${PY_FLAVOR} diff --git a/math/py-pcodec/Makefile b/math/py-pcodec/Makefile index a5c3baa55828..516004e11e81 100644 --- a/math/py-pcodec/Makefile +++ b/math/py-pcodec/Makefile @@ -1,6 +1,6 @@ PORTNAME= pcodec PORTVERSION= 0.3.5 -PORTREVISION= 4 +PORTREVISION= 5 CATEGORIES= math python MASTER_SITES= PYPI PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} diff --git a/math/py-rustworkx/Makefile b/math/py-rustworkx/Makefile index 9f842b0c5861..d5cc4e0342ad 100644 --- a/math/py-rustworkx/Makefile +++ b/math/py-rustworkx/Makefile @@ -1,6 +1,6 @@ PORTNAME= rustworkx DISTVERSION= 0.17.1 -PORTREVISION= 3 +PORTREVISION= 4 CATEGORIES= math python #MASTER_SITES= PYPI PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} diff --git a/math/py-statsmodels/Makefile b/math/py-statsmodels/Makefile index a336ac0aed9c..65cb28c68a64 100644 --- a/math/py-statsmodels/Makefile +++ b/math/py-statsmodels/Makefile @@ -15,7 +15,7 @@ LICENSE_FILE= ${WRKSRC}/LICENSE.txt BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}numpy>=1.22.3,1<2,1:math/py-numpy@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}scipy>=1.8,1<2,1:science/py-scipy@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}setuptools>=63.1.0:devel/py-setuptools@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}setuptools-scm>=8<9:devel/py-setuptools-scm@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}setuptools-scm>=8<10:devel/py-setuptools-scm@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}wheel>=0:devel/py-wheel@${PY_FLAVOR} RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}numpy>=1.22.3,1<2,1:math/py-numpy@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}packaging>=21.3:devel/py-packaging@${PY_FLAVOR} \ diff --git a/math/py-statsmodels/files/patch-pyproject.toml b/math/py-statsmodels/files/patch-pyproject.toml index e7b6ab880b99..59e32baf8478 100644 --- a/math/py-statsmodels/files/patch-pyproject.toml +++ b/math/py-statsmodels/files/patch-pyproject.toml @@ -1,6 +1,6 @@ --- pyproject.toml.orig 2025-07-02 15:55:37 UTC +++ pyproject.toml -@@ -2,10 +2,10 @@ requires = [ +@@ -2,11 +2,11 @@ requires = [ # These are strictly build requirements. Runtime requirements are listed in # INSTALL_REQUIRES in setup.py requires = [ @@ -9,8 +9,10 @@ "cython>=3.0.10,<4", # Sync with CYTHON_MIN_VER in setup - "numpy>=2.0.0,<3", - "scipy>=1.13,<2", +- "setuptools_scm[toml]>=8,<9" + "numpy>=1.22.3,<3", + "scipy>=1.8,<2", - "setuptools_scm[toml]>=8,<9" ++ "setuptools_scm[toml]>=8,<10" ] build-backend = "setuptools.build_meta" + diff --git a/math/saga/Makefile b/math/saga/Makefile index 5f25e05b5553..40321f22c227 100644 --- a/math/saga/Makefile +++ b/math/saga/Makefile @@ -1,6 +1,5 @@ PORTNAME= saga -PORTVERSION= 9.10.2 -PORTREVISION= 1 +PORTVERSION= 9.11.0 CATEGORIES= math MASTER_SITES= SF/saga-gis/SAGA%20-%20${PORTVERSION:C/([0-9]).*/\1/1}/SAGA%20-%20${PORTVERSION} MAINTAINER= rhurlin@FreeBSD.org @@ -36,7 +35,7 @@ DOS2UNIX_GLOB= *.cpp *.h *.txt USE_LDCONFIG= yes USE_WX= 3.2+ -GIT_TAGNAME= c4a591f4f +GIT_TAGNAME= 10981b30c CMAKE_ARGS= -DSVM_INCLUDE:PATH=${LOCALBASE}/include/svm.h \ -DWITH_TOOLS_PDAL:BOOL=TRUE @@ -50,7 +49,6 @@ CMAKE_ON+= WITH_SYSTEM_SVM CMAKE_ON+= WITH_TOOLS_HPDF CMAKE_ON+= WITH_TOOLS_OPENCV CMAKE_ON+= WITH_PYTHON_PKG -CMAKE_ON+= WITH_TOOLS_PDAL CMAKE_ON+= WITH_TOOLS_POSTGRES CMAKE_ON+= WITH_TOOLS_PROJ CMAKE_OFF= WITH_CLIPPER_ONE @@ -103,6 +101,8 @@ post-install: (cd ${WRKSRC}/src/accessories && ${RM} -R python) (cd ${WRKSRC}/src/accessories && ${COPYTREE_SHARE} . ${STAGEDIR}${DATADIR}) ${RM} -R ${STAGEDIR}${DATADIR}/CMakeLists.txt + ${RM} -R ${STAGEDIR}${DATADIR}/classification + ${RM} -R ${STAGEDIR}${DATADIR}/color_ramps ${RM} -R ${STAGEDIR}${DATADIR}/templates/template4saga-tools/my_tool_library/Makefile.bak # library helper files are not needed and cripple some math/qgis extensions @${RM} ${STAGEDIR}${PREFIX}/lib/saga/*.la diff --git a/math/saga/distinfo b/math/saga/distinfo index cc3dbbf1120a..5d8d8ae5b9c1 100644 --- a/math/saga/distinfo +++ b/math/saga/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1764964879 -SHA256 (saga-9.10.2.tar.gz) = 7ec307d9d5c4d30d43b086090b746c713fda0c361e7b05cba3a3012c22f6cc2a -SIZE (saga-9.10.2.tar.gz) = 10797332 +TIMESTAMP = 1765999240 +SHA256 (saga-9.11.0.tar.gz) = 2a848bd4e9f12bf749c70953c501938880b27c41a954c9e88db5a2d2267a195f +SIZE (saga-9.11.0.tar.gz) = 10349245 diff --git a/math/saga/files/patch-CMakeLists.txt b/math/saga/files/patch-CMakeLists.txt deleted file mode 100644 index 380875109d73..000000000000 --- a/math/saga/files/patch-CMakeLists.txt +++ /dev/null @@ -1,13 +0,0 @@ ---- CMakeLists.txt.orig 2024-11-13 13:14:04 UTC -+++ CMakeLists.txt -@@ -26,6 +26,10 @@ set(CMAKE_CXX_STANDARD_REQUIRED ON CACHE STRING "Th - set(CMAKE_CXX_STANDARD 14 CACHE STRING "C++ standard to be used") - set(CMAKE_CXX_STANDARD_REQUIRED ON CACHE STRING "The C++ standard is required") - -+# Get Compiler info for about dialog -+set(COMPILER "${CMAKE_CXX_COMPILER_ID} ${CMAKE_CXX_COMPILER_VERSION}") -+add_definitions(-DCOMPILER="${COMPILER}") -+ - # Platform dependent compiler requirements - if(MSVC) - set(CMAKE_CONFIGURATION_TYPES "Debug;Release" CACHE STRING "" FORCE) diff --git a/math/saga/pkg-plist b/math/saga/pkg-plist index ab3d7cb95d6f..50c645b59804 100644 --- a/math/saga/pkg-plist +++ b/math/saga/pkg-plist @@ -40,8 +40,6 @@ lib/libsaga_gdi.so.%%PORTVERSION%% %%PYTHON_SITELIBDIR%%/PySAGA/__init__.py %%PYTHON_SITELIBDIR%%/PySAGA/_saga_api.so %%PYTHON_SITELIBDIR%%/PySAGA/convert.py -%%PYTHON_SITELIBDIR%%/PySAGA/data/chelsa.py -%%PYTHON_SITELIBDIR%%/PySAGA/data/copernicus_dem.py %%PYTHON_SITELIBDIR%%/PySAGA/data/helper.py %%PYTHON_SITELIBDIR%%/PySAGA/data/srtm.py %%PYTHON_SITELIBDIR%%/PySAGA/helper.py @@ -217,74 +215,6 @@ share/man/man1/saga_cmd.1.gz share/man/man1/saga_gui.1.gz share/metainfo/org.saga_gis.saga_gui.appdata.xml share/pixmaps/saga.png -%%DATADIR%%/classification/classify_corine_clc_features.txt -%%DATADIR%%/classification/classify_corine_clc_raster.txt -%%DATADIR%%/classification/classify_precipitation_1.txt -%%DATADIR%%/classification/classify_precipitation_2.txt -%%DATADIR%%/classification/classify_precipitation_3.txt -%%DATADIR%%/classification/classify_stddev_1.txt -%%DATADIR%%/classification/classify_stddev_2.txt -%%DATADIR%%/classification/classify_topography_1.txt -%%DATADIR%%/color_ramps/CET-C1.pal -%%DATADIR%%/color_ramps/CET-C1s.pal -%%DATADIR%%/color_ramps/CET-C2.pal -%%DATADIR%%/color_ramps/CET-C2s.pal -%%DATADIR%%/color_ramps/CET-C3.pal -%%DATADIR%%/color_ramps/CET-C3s.pal -%%DATADIR%%/color_ramps/CET-C4.pal -%%DATADIR%%/color_ramps/CET-C4s.pal -%%DATADIR%%/color_ramps/CET-C5.pal -%%DATADIR%%/color_ramps/CET-C5s.pal -%%DATADIR%%/color_ramps/CET-C6.pal -%%DATADIR%%/color_ramps/CET-C6s.pal -%%DATADIR%%/color_ramps/CET-C7.pal -%%DATADIR%%/color_ramps/CET-C7s.pal -%%DATADIR%%/color_ramps/CET-CBC1.pal -%%DATADIR%%/color_ramps/CET-CBC2.pal -%%DATADIR%%/color_ramps/CET-CBD1.pal -%%DATADIR%%/color_ramps/CET-CBL1.pal -%%DATADIR%%/color_ramps/CET-CBL2.pal -%%DATADIR%%/color_ramps/CET-D01.pal -%%DATADIR%%/color_ramps/CET-D01A.pal -%%DATADIR%%/color_ramps/CET-D02.pal -%%DATADIR%%/color_ramps/CET-D03.pal -%%DATADIR%%/color_ramps/CET-D04.pal -%%DATADIR%%/color_ramps/CET-D06.pal -%%DATADIR%%/color_ramps/CET-D07.pal -%%DATADIR%%/color_ramps/CET-D08.pal -%%DATADIR%%/color_ramps/CET-D09.pal -%%DATADIR%%/color_ramps/CET-D10.pal -%%DATADIR%%/color_ramps/CET-D11.pal -%%DATADIR%%/color_ramps/CET-D12.pal -%%DATADIR%%/color_ramps/CET-D13.pal -%%DATADIR%%/color_ramps/CET-I1.pal -%%DATADIR%%/color_ramps/CET-I2.pal -%%DATADIR%%/color_ramps/CET-I3.pal -%%DATADIR%%/color_ramps/CET-L01.pal -%%DATADIR%%/color_ramps/CET-L02.pal -%%DATADIR%%/color_ramps/CET-L03.pal -%%DATADIR%%/color_ramps/CET-L04.pal -%%DATADIR%%/color_ramps/CET-L05.pal -%%DATADIR%%/color_ramps/CET-L06.pal -%%DATADIR%%/color_ramps/CET-L07.pal -%%DATADIR%%/color_ramps/CET-L08.pal -%%DATADIR%%/color_ramps/CET-L09.pal -%%DATADIR%%/color_ramps/CET-L10.pal -%%DATADIR%%/color_ramps/CET-L11.pal -%%DATADIR%%/color_ramps/CET-L12.pal -%%DATADIR%%/color_ramps/CET-L13.pal -%%DATADIR%%/color_ramps/CET-L14.pal -%%DATADIR%%/color_ramps/CET-L15.pal -%%DATADIR%%/color_ramps/CET-L16.pal -%%DATADIR%%/color_ramps/CET-L17.pal -%%DATADIR%%/color_ramps/CET-L18.pal -%%DATADIR%%/color_ramps/CET-L19.pal -%%DATADIR%%/color_ramps/CET-L20.pal -%%DATADIR%%/color_ramps/CET-R1.pal -%%DATADIR%%/color_ramps/CET-R2.pal -%%DATADIR%%/color_ramps/CET-R3.pal -%%DATADIR%%/color_ramps/CET-R4.pal -%%DATADIR%%/color_ramps/README.md %%DATADIR%%/debug/README.md %%DATADIR%%/debug/gdb_saga_api_pp.py %%DATADIR%%/docs/saga_on_mac.md @@ -313,8 +243,8 @@ share/pixmaps/saga.png %%DATADIR%%/helper/make_translation_files.bat %%DATADIR%%/helper/saga_python_version_tester.bat %%DATADIR%%/helper/saga_python_version_tester.py +%%DATADIR%%/helper/saga_setup.iss %%DATADIR%%/helper/saga_setup_readme.rtf -%%DATADIR%%/helper/saga_setup_x64.iss %%DATADIR%%/resources/classification/classify_corine_clc_features.txt %%DATADIR%%/resources/classification/classify_corine_clc_raster.txt %%DATADIR%%/resources/classification/classify_precipitation_1.txt @@ -323,6 +253,7 @@ share/pixmaps/saga.png %%DATADIR%%/resources/classification/classify_stddev_1.txt %%DATADIR%%/resources/classification/classify_stddev_2.txt %%DATADIR%%/resources/classification/classify_topography_1.txt +%%DATADIR%%/resources/classification/classify_topography_2.txt %%DATADIR%%/resources/color_ramps/CET-C1.pal %%DATADIR%%/resources/color_ramps/CET-C1s.pal %%DATADIR%%/resources/color_ramps/CET-C2.pal diff --git a/math/savage/Makefile b/math/savage/Makefile index 499722cb6382..3445b5b309c1 100644 --- a/math/savage/Makefile +++ b/math/savage/Makefile @@ -1,7 +1,7 @@ PORTNAME= savage DISTVERSIONPREFIX= v DISTVERSION= 0.2.0 -PORTREVISION= 34 +PORTREVISION= 35 CATEGORIES= math MAINTAINER= ashish@FreeBSD.org |