diff options
Diffstat (limited to 'math')
39 files changed, 92 insertions, 74 deletions
diff --git a/math/Makefile b/math/Makefile index 034758a97829..ce2fd3a4e380 100644 --- a/math/Makefile +++ b/math/Makefile @@ -471,7 +471,6 @@ SUBDIR += librdata SUBDIR += librsb SUBDIR += libsemigroups - SUBDIR += libsharp2 SUBDIR += libtexprintf SUBDIR += libtommath SUBDIR += libxls @@ -1082,6 +1081,7 @@ SUBDIR += py-pyprobables SUBDIR += py-pyreadr SUBDIR += py-pyreadstat + SUBDIR += py-pyrfr SUBDIR += py-pyrr SUBDIR += py-pysmt SUBDIR += py-pysym diff --git a/math/R-cran-Zelig/Makefile b/math/R-cran-Zelig/Makefile index 491d545dcba0..36a16e8a5515 100644 --- a/math/R-cran-Zelig/Makefile +++ b/math/R-cran-Zelig/Makefile @@ -10,6 +10,9 @@ WWW= https://gking.harvard.edu/zelig LICENSE= GPLv3+ +DEPRECATED= Depends on expirnig finance/R-cran-AER +EXPIRATION_DATE=2025-09-30 + BUILD_DEPENDS= R-cran-AER>=0:finance/R-cran-AER \ R-cran-Amelia>=0:math/R-cran-Amelia \ R-cran-sandwich>=0:math/R-cran-sandwich \ diff --git a/math/R-cran-car/Makefile b/math/R-cran-car/Makefile index 015174487b50..96de99aae88c 100644 --- a/math/R-cran-car/Makefile +++ b/math/R-cran-car/Makefile @@ -9,6 +9,9 @@ WWW= https://r-forge.r-project.org/projects/car/ LICENSE= GPLv2+ +DEPRECATED= Depends on expired astro/R-cran-maptools +EXPIRATION_DATE=2025-09-30 + BUILD_DEPENDS= R-cran-Formula>=0:math/R-cran-Formula RUN_DEPENDS= R-cran-maptools>0:astro/R-cran-maptools \ R-cran-abind>0:devel/R-cran-abind \ diff --git a/math/R-cran-igraph/Makefile b/math/R-cran-igraph/Makefile index bad03af9c974..00a1b5eb526e 100644 --- a/math/R-cran-igraph/Makefile +++ b/math/R-cran-igraph/Makefile @@ -1,5 +1,6 @@ PORTNAME= igraph DISTVERSION= 2.1.4 +PORTREVISION= 1 CATEGORIES= math DISTNAME= ${PORTNAME}_${DISTVERSION} diff --git a/math/cadabra2/Makefile b/math/cadabra2/Makefile index 279e1505993d..6d80737dae40 100644 --- a/math/cadabra2/Makefile +++ b/math/cadabra2/Makefile @@ -1,6 +1,6 @@ PORTNAME= cadabra2 DISTVERSION= 2.5.8 -PORTREVISION= 2 +PORTREVISION= 3 CATEGORIES= math MAINTAINER= yuri@FreeBSD.org @@ -21,7 +21,7 @@ LIB_DEPENDS= ${PY_BOOST} \ libpcrecpp.so:devel/pcre \ libjsoncpp.so:devel/jsoncpp \ libgmp.so:math/gmp \ - libuuid.so:misc/e2fsprogs-libuuid + libuuid.so:misc/libuuid RUN_DEPENDS= ${PYTHON_SITELIBDIR}/sympy/__init__.py:math/py-sympy@${PY_FLAVOR} \ ${PYTHON_SITELIBDIR}/matplotlib/__init__.py:math/py-matplotlib@${PY_FLAVOR} diff --git a/math/cantor/Makefile b/math/cantor/Makefile index c5a8629aeb7f..f71fc0ad3913 100644 --- a/math/cantor/Makefile +++ b/math/cantor/Makefile @@ -1,5 +1,6 @@ PORTNAME= cantor DISTVERSION= ${KDE_APPLICATIONS_VERSION} +PORTREVISION= 1 CATEGORIES= math kde kde-applications MAINTAINER= kde@FreeBSD.org diff --git a/math/drgeo/Makefile b/math/drgeo/Makefile index 6cf3a5517bde..825be10c4f98 100644 --- a/math/drgeo/Makefile +++ b/math/drgeo/Makefile @@ -1,6 +1,6 @@ PORTNAME= drgeo PORTVERSION= 1.1.0 -PORTREVISION= 26 +PORTREVISION= 27 CATEGORIES= math MASTER_SITES= SF/ofset/${PORTNAME}/${PORTVERSION} diff --git a/math/eclib/Makefile b/math/eclib/Makefile index 8cfb1f20427e..bb88e4353016 100644 --- a/math/eclib/Makefile +++ b/math/eclib/Makefile @@ -1,5 +1,5 @@ PORTNAME= eclib -PORTVERSION= 20250530 +PORTVERSION= 20250627 DISTVERSIONPREFIX= v CATEGORIES= math diff --git a/math/eclib/distinfo b/math/eclib/distinfo index e1beec5a20ae..753811fede2a 100644 --- a/math/eclib/distinfo +++ b/math/eclib/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1749665130 -SHA256 (JohnCremona-eclib-v20250530_GH0.tar.gz) = 1a588ae91a1617809f7414160cf4538f07d9ff379ff7e4e2adeaea9663cba214 -SIZE (JohnCremona-eclib-v20250530_GH0.tar.gz) = 1059302 +TIMESTAMP = 1751291767 +SHA256 (JohnCremona-eclib-v20250627_GH0.tar.gz) = c45cc20366effd5fce8ec3245ecf33f99e0d08222e21644a8db57e1356d85b4f +SIZE (JohnCremona-eclib-v20250627_GH0.tar.gz) = 1059399 diff --git a/math/fxt/Makefile b/math/fxt/Makefile index ca9bbcb4276a..f05f14083574 100644 --- a/math/fxt/Makefile +++ b/math/fxt/Makefile @@ -1,5 +1,5 @@ PORTNAME= fxt -PORTVERSION= 2025.04.17 +PORTVERSION= 2025.06.26 CATEGORIES= math MASTER_SITES= https://www.jjj.de/fxt/ diff --git a/math/fxt/distinfo b/math/fxt/distinfo index a6b1cfe3fe7c..222cb8f1a017 100644 --- a/math/fxt/distinfo +++ b/math/fxt/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1745177908 -SHA256 (fxt-2025.04.17.tar.gz) = e11bed2e3af1ef8a8fc9ad85c3ce63ee6887c00b0ef7f9025671501120620b57 -SIZE (fxt-2025.04.17.tar.gz) = 1571687 +TIMESTAMP = 1751208130 +SHA256 (fxt-2025.06.26.tar.gz) = bab757d71078ebe6c29c0eadfc69134dd945d8bf6e953120f06b3781c1d74481 +SIZE (fxt-2025.06.26.tar.gz) = 1571843 diff --git a/math/ggobi/Makefile b/math/ggobi/Makefile index 6f654543be3c..c850ac393f25 100644 --- a/math/ggobi/Makefile +++ b/math/ggobi/Makefile @@ -1,6 +1,6 @@ PORTNAME= ggobi DISTVERSION= 2.1.12 -PORTREVISION= 1 +PORTREVISION= 2 CATEGORIES= math graphics MAINTAINER= rhurlin@FreeBSD.org diff --git a/math/gkmap/Makefile b/math/gkmap/Makefile index 0b80325bfcb3..7e34902acd2e 100644 --- a/math/gkmap/Makefile +++ b/math/gkmap/Makefile @@ -1,6 +1,6 @@ PORTNAME= gkmap PORTVERSION= 0.2 -PORTREVISION= 7 +PORTREVISION= 8 CATEGORIES= math MASTER_SITES= SF/gkmap/gkmap/gkmap-${PORTVERSION}/ diff --git a/math/gnome-calculator/Makefile b/math/gnome-calculator/Makefile index c709fb2a9ad6..1f7a45a12a17 100644 --- a/math/gnome-calculator/Makefile +++ b/math/gnome-calculator/Makefile @@ -1,5 +1,6 @@ PORTNAME= gnome-calculator PORTVERSION= 47.3 +PORTREVISION= 1 CATEGORIES= math gnome MASTER_SITES= GNOME DIST_SUBDIR= gnome diff --git a/math/gnumeric/Makefile b/math/gnumeric/Makefile index c1314b703638..15015c8c7fd3 100644 --- a/math/gnumeric/Makefile +++ b/math/gnumeric/Makefile @@ -1,5 +1,6 @@ PORTNAME= gnumeric PORTVERSION= 1.12.59 +PORTREVISION= 1 CATEGORIES= math gnome MASTER_SITES= GNOME DIST_SUBDIR= gnome diff --git a/math/gretl/Makefile b/math/gretl/Makefile index 7b333de2c727..634f2ba99091 100644 --- a/math/gretl/Makefile +++ b/math/gretl/Makefile @@ -1,6 +1,6 @@ PORTNAME= gretl PORTVERSION= 2024d -PORTREVISION= 1 +PORTREVISION= 2 CATEGORIES= math finance MASTER_SITES= SF/${PORTNAME}/${PORTNAME}/${DISTVERSIONFULL}/ diff --git a/math/igraph/Makefile b/math/igraph/Makefile index e72dcfb6762d..1c2650164848 100644 --- a/math/igraph/Makefile +++ b/math/igraph/Makefile @@ -1,6 +1,6 @@ PORTNAME= igraph DISTVERSION= 0.10.12 -PORTREVISION= 3 +PORTREVISION= 4 CATEGORIES= math MASTER_SITES= https://github.com/${PORTNAME}/${PORTNAME}/releases/download/${DISTVERSION}/ diff --git a/math/kissat/Makefile b/math/kissat/Makefile index 2605eb1b397f..a2c35fe559ff 100644 --- a/math/kissat/Makefile +++ b/math/kissat/Makefile @@ -1,6 +1,6 @@ PORTNAME= kissat DISTVERSIONPREFIX= rel- -DISTVERSION= 4.0.2 +DISTVERSION= 4.0.3 CATEGORIES= math MAINTAINER= yuri@FreeBSD.org @@ -48,6 +48,6 @@ do-install: # https://github.com/arminbiere/kissat/issues/62 ${INSTALL_LIB} ${WRKSRC}/build/libkissat.so ${STAGEDIR}${PREFIX}/lib ${INSTALL_DATA} ${WRKSRC}/build/libkissat.a ${STAGEDIR}${PREFIX}/lib -# tests as of 4.0.2: All 1043 test jobs succeeded in 2.35 seconds. +# tests as of 4.0.3: All 1043 test jobs succeeded in 6.65 seconds. .include <bsd.port.mk> diff --git a/math/kissat/distinfo b/math/kissat/distinfo index 8e523b8b6848..5616f9414e86 100644 --- a/math/kissat/distinfo +++ b/math/kissat/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1737785441 -SHA256 (arminbiere-kissat-rel-4.0.2_GH0.tar.gz) = a8e58a70ebac09ccc0ba1465a69cfb9b31e562167d42df7535270d2733c386d7 -SIZE (arminbiere-kissat-rel-4.0.2_GH0.tar.gz) = 531941 +TIMESTAMP = 1751232358 +SHA256 (arminbiere-kissat-rel-4.0.3_GH0.tar.gz) = 53ad0c86a3854cdbf16e871599de4eaaaf33a039c1fd3460e43c89ae2a8a0971 +SIZE (arminbiere-kissat-rel-4.0.3_GH0.tar.gz) = 531881 diff --git a/math/libqalculate/Makefile b/math/libqalculate/Makefile index 00960746d5b2..009ed889aaea 100644 --- a/math/libqalculate/Makefile +++ b/math/libqalculate/Makefile @@ -1,5 +1,6 @@ PORTNAME= libqalculate PORTVERSION= 5.5.2 +PORTREVISION= 1 CATEGORIES= math MASTER_SITES= https://github.com/Qalculate/${PORTNAME}/releases/download/v${PORTVERSION}/ diff --git a/math/libsharp2/Makefile b/math/libsharp2/Makefile deleted file mode 100644 index 0b72adecf3ce..000000000000 --- a/math/libsharp2/Makefile +++ /dev/null @@ -1,27 +0,0 @@ -PORTNAME= libsharp2 -DISTVERSION= g20191210 -CATEGORIES= math - -MAINTAINER= yuri@FreeBSD.org -COMMENT= Library for fast spherical harmonic transforms -WWW= https://gitlab.mpcdf.mpg.de/mtr/libsharp - -LICENSE= GPLv2 -LICENSE_FILE= ${WRKSRC}/COPYING - -DEPRECATED= Deprecated upstream in 2021, upstream recommends migrating to ducc0 -EXPIRATION_DATE=2025-06-30 - -USES= autoreconf gmake libtool -USE_GITLAB= yes - -GL_SITE= https://gitlab.mpcdf.mpg.de -GL_ACCOUNT= mtr -GL_PROJECT= libsharp -GL_TAGNAME= 54856313a5fcfb6a33817b7dfa28c4b1965ffbd1 - -GNU_CONFIGURE= yes - -INSTALL_TARGET= install-strip - -.include <bsd.port.mk> diff --git a/math/libsharp2/distinfo b/math/libsharp2/distinfo deleted file mode 100644 index 3b84fd0b35b6..000000000000 --- a/math/libsharp2/distinfo +++ /dev/null @@ -1,3 +0,0 @@ -TIMESTAMP = 1619405647 -SHA256 (mtr-libsharp-54856313a5fcfb6a33817b7dfa28c4b1965ffbd1_GL0.tar.gz) = 30a8febdc30e210ba91a6e8e112aba25cd630d7821686872ce48bd08400e0f7a -SIZE (mtr-libsharp-54856313a5fcfb6a33817b7dfa28c4b1965ffbd1_GL0.tar.gz) = 69059 diff --git a/math/libsharp2/pkg-descr b/math/libsharp2/pkg-descr deleted file mode 100644 index 298db1856068..000000000000 --- a/math/libsharp2/pkg-descr +++ /dev/null @@ -1,2 +0,0 @@ -Library for efficient spherical harmonic transforms at arbitrary spins, -supporting CPU vectorization, OpenMP and MPI. diff --git a/math/libsharp2/pkg-plist b/math/libsharp2/pkg-plist deleted file mode 100644 index f6df56f16ee0..000000000000 --- a/math/libsharp2/pkg-plist +++ /dev/null @@ -1,10 +0,0 @@ -include/libsharp2/sharp.h -include/libsharp2/sharp_almhelpers.h -include/libsharp2/sharp_cxx.h -include/libsharp2/sharp_geomhelpers.h -include/libsharp2/sharp_mpi.h -lib/libsharp2.a -lib/libsharp2.so -lib/libsharp2.so.0 -lib/libsharp2.so.0.0.0 -libdata/pkgconfig/libsharp2.pc diff --git a/math/mate-calc/Makefile b/math/mate-calc/Makefile index 21b07bb6e62b..628718c184e4 100644 --- a/math/mate-calc/Makefile +++ b/math/mate-calc/Makefile @@ -1,5 +1,6 @@ PORTNAME= mate-calc PORTVERSION= 1.28.0 +PORTREVISION= 1 CATEGORIES= math mate MASTER_SITES= MATE DIST_SUBDIR= mate diff --git a/math/mdal/Makefile b/math/mdal/Makefile index e7cd9b760930..f7816901df5a 100644 --- a/math/mdal/Makefile +++ b/math/mdal/Makefile @@ -1,7 +1,7 @@ PORTNAME= mdal DISTVERSIONPREFIX= release- DISTVERSION= 1.2.0 -PORTREVISION= 4 +PORTREVISION= 5 CATEGORIES= math geography MAINTAINER= wen@FreeBSD.org diff --git a/math/openturns/Makefile b/math/openturns/Makefile index 91da67f9b26f..8375e1e39c0d 100644 --- a/math/openturns/Makefile +++ b/math/openturns/Makefile @@ -1,7 +1,7 @@ PORTNAME= openturns DISTVERSIONPREFIX= v DISTVERSION= 1.24 -PORTREVISION= 5 +PORTREVISION= 6 CATEGORIES= math MAINTAINER= yuri@FreeBSD.org diff --git a/math/pdal/Makefile b/math/pdal/Makefile index 840dcb59881e..0c7ebdff593d 100644 --- a/math/pdal/Makefile +++ b/math/pdal/Makefile @@ -1,6 +1,6 @@ PORTNAME= pdal DISTVERSION= 2.8.4 -PORTREVISION= 2 +PORTREVISION= 3 CATEGORIES= math databases graphics MASTER_SITES= https://github.com/PDAL/PDAL/releases/download/${DISTVERSION}/ DISTNAME= ${PORTNAME}-${DISTVERSION}-src diff --git a/math/py-pyreadstat/Makefile b/math/py-pyreadstat/Makefile index 28702f0c4c52..d948c77b4952 100644 --- a/math/py-pyreadstat/Makefile +++ b/math/py-pyreadstat/Makefile @@ -1,6 +1,5 @@ PORTNAME= pyreadstat -PORTVERSION= 1.2.9 -PORTREVISION= 1 +PORTVERSION= 1.3.0 CATEGORIES= math python MASTER_SITES= PYPI PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} diff --git a/math/py-pyreadstat/distinfo b/math/py-pyreadstat/distinfo index 0228375655b3..333820b5c423 100644 --- a/math/py-pyreadstat/distinfo +++ b/math/py-pyreadstat/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1747715454 -SHA256 (pyreadstat-1.2.9.tar.gz) = bc4ff137b70013869727926867cf3c175ac56fd4e4a1d0e4317b559d8487ee4f -SIZE (pyreadstat-1.2.9.tar.gz) = 565303 +TIMESTAMP = 1751208170 +SHA256 (pyreadstat-1.3.0.tar.gz) = faddb9086797b24ff8f0540b8493ef5875620384e065a2d212f94295f69517a4 +SIZE (pyreadstat-1.3.0.tar.gz) = 566015 diff --git a/math/py-pyrfr/Makefile b/math/py-pyrfr/Makefile new file mode 100644 index 000000000000..f6b888d07f6a --- /dev/null +++ b/math/py-pyrfr/Makefile @@ -0,0 +1,26 @@ +PORTNAME= pyrfr +DISTVERSION= 0.9.0 +CATEGORIES= math +MASTER_SITES= PYPI +PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} + +MAINTAINER= yuri@FreeBSD.org +COMMENT= Python bindings for the extensible C++ library for random forests +WWW= https://github.com/automl/random_forest_run + +LICENSE= BSD3CLAUSE +LICENSE_FILE= ${WRKSRC}/LICENSE.txt + +BUILD_DEPENDS= ${PY_SETUPTOOLS} \ + swig:devel/swig \ + ${PYTHON_PKGNAMEPREFIX}wheel>0:devel/py-wheel@${PY_FLAVOR} + +USES= compiler:c++11-lang python +USE_PYTHON= pep517 autoplist pytest + +post-install: + @${STRIP_CMD} \ + ${STAGEDIR}${PYTHON_SITELIBDIR}/pyrfr/_regression${PYTHON_TAG}.so \ + ${STAGEDIR}${PYTHON_SITELIBDIR}/pyrfr/_util${PYTHON_TAG}.so + +.include <bsd.port.mk> diff --git a/math/py-pyrfr/distinfo b/math/py-pyrfr/distinfo new file mode 100644 index 000000000000..2442b3d9b0f1 --- /dev/null +++ b/math/py-pyrfr/distinfo @@ -0,0 +1,3 @@ +TIMESTAMP = 1751228849 +SHA256 (pyrfr-0.9.0.tar.gz) = bc6e758317cf79579fe6b7ce5f01dd42f77c991bf707e33646e8c6a9112c186b +SIZE (pyrfr-0.9.0.tar.gz) = 295099 diff --git a/math/py-pyrfr/files/patch-include_cereal_external_rapidjson_document.h b/math/py-pyrfr/files/patch-include_cereal_external_rapidjson_document.h new file mode 100644 index 000000000000..86d71f96a4b3 --- /dev/null +++ b/math/py-pyrfr/files/patch-include_cereal_external_rapidjson_document.h @@ -0,0 +1,13 @@ +- https://github.com/automl/random_forest_run/issues/8 + +--- include/cereal/external/rapidjson/document.h.orig 2025-06-29 20:57:03 UTC ++++ include/cereal/external/rapidjson/document.h +@@ -322,7 +322,7 @@ struct GenericStringRef { + operator const Ch *() const { return s; } + + const Ch* const s; //!< plain CharType pointer +- const SizeType length; //!< length of the string (excluding the trailing NULL terminator) ++ SizeType length; //!< length of the string (excluding the trailing NULL terminator) + + private: + //! Disallow construction from non-const array diff --git a/math/py-pyrfr/pkg-descr b/math/py-pyrfr/pkg-descr new file mode 100644 index 000000000000..082449e5a710 --- /dev/null +++ b/math/py-pyrfr/pkg-descr @@ -0,0 +1,2 @@ +pyrfr is a Python binding for the extensible C++ library +for random forests. diff --git a/math/qalculate-gtk/Makefile b/math/qalculate-gtk/Makefile index ffc2b6a54f5a..2f079e617944 100644 --- a/math/qalculate-gtk/Makefile +++ b/math/qalculate-gtk/Makefile @@ -1,5 +1,6 @@ PORTNAME= qalculate-gtk PORTVERSION= 5.5.1 +PORTREVISION= 1 CATEGORIES= math MASTER_SITES= https://github.com/Qalculate/${PORTNAME}/releases/download/v${PORTVERSION}/ diff --git a/math/rkward/Makefile b/math/rkward/Makefile index c6c85fc150cc..eb75eed4c1e9 100644 --- a/math/rkward/Makefile +++ b/math/rkward/Makefile @@ -10,6 +10,9 @@ WWW= https://rkward.kde.org/ LICENSE= GPLv2 +DEPRECATED= Depends on expiring math/R-cran-car +EXPIRATION_DATE=2025-09-30 + BUILD_DEPENDS= vulkan-headers>0:graphics/vulkan-headers LIB_DEPENDS= libR.so:math/R \ libcups.so:print/cups \ diff --git a/math/sc-im/Makefile b/math/sc-im/Makefile index 4da38d4c711e..af24a86e3a8e 100644 --- a/math/sc-im/Makefile +++ b/math/sc-im/Makefile @@ -1,6 +1,7 @@ PORTNAME= sc-im DISTVERSIONPREFIX= v DISTVERSION= 0.8.5 +PORTREVISION= 1 CATEGORIES= math MAINTAINER= bapt@FreeBSD.org diff --git a/math/timbl/Makefile b/math/timbl/Makefile index 1951c62e8c3f..7d8799af6c59 100644 --- a/math/timbl/Makefile +++ b/math/timbl/Makefile @@ -1,6 +1,6 @@ PORTNAME= timbl DISTVERSION= 6.10 -PORTREVISION= 1 +PORTREVISION= 2 CATEGORIES= math education MASTER_SITES= https://github.com/LanguageMachines/${PORTNAME}/releases/download/v${DISTVERSION}/ diff --git a/math/topologic/Makefile b/math/topologic/Makefile index 54d328a7e2b7..8b8431a7cc5d 100644 --- a/math/topologic/Makefile +++ b/math/topologic/Makefile @@ -1,7 +1,7 @@ PORTNAME= topologic DISTVERSIONPREFIX= v DISTVERSION= 6.0.3 -PORTREVISION= 3 +PORTREVISION= 4 CATEGORIES= math PKGNAMESUFFIX= -space-modeling-library @@ -14,7 +14,7 @@ LICENSE_FILE= ${WRKSRC}/LICENSE LIB_DEPENDS= libtbb.so:devel/onetbb \ libTKernel.so:cad/opencascade \ - libuuid.so:misc/e2fsprogs-libuuid + libuuid.so:misc/libuuid USES= cmake compiler:c++14-lang localbase:ldflags USE_LDCONFIG= ${PREFIX}/lib/TopologicCore |