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-rw-r--r--math/4ti2/Makefile6
-rw-r--r--math/4ti2/distinfo6
-rw-r--r--math/R-cran-DEoptimR/Makefile4
-rw-r--r--math/R-cran-DEoptimR/distinfo6
-rw-r--r--math/R-cran-pbkrtest/Makefile2
-rw-r--r--math/R-cran-pbkrtest/distinfo6
-rw-r--r--math/R-cran-terra/Makefile2
-rw-r--r--math/R-cran-terra/distinfo6
-rw-r--r--math/R-cran-terra/files/patch-i38645
-rw-r--r--math/armadillo/Makefile2
-rw-r--r--math/armadillo/distinfo6
-rw-r--r--math/libRmath/Makefile4
-rw-r--r--math/libRmath/distinfo6
-rw-r--r--math/maxima/Makefile2
-rw-r--r--math/mdal/Makefile3
-rw-r--r--math/mumps/Makefile2
-rw-r--r--math/mumps4/Makefile2
-rw-r--r--math/octave-forge-csg-toolkit/Makefile4
-rw-r--r--math/octave-forge-csg-toolkit/distinfo6
-rw-r--r--math/octave-forge-datatypes/Makefile2
-rw-r--r--math/octave-forge-datatypes/distinfo6
-rw-r--r--math/octave-forge-geometry/Makefile4
-rw-r--r--math/octave-forge-pkg-octave-doc/Makefile2
-rw-r--r--math/octave-forge-pkg-octave-doc/distinfo6
-rw-r--r--math/octave-forge-statistics/Makefile2
-rw-r--r--math/octave-forge-statistics/distinfo6
-rw-r--r--math/p5-Math-Pari/Makefile8
-rw-r--r--math/p5-Statistics-CaseResampling/Makefile2
-rw-r--r--math/p5-Statistics-CaseResampling/distinfo6
-rw-r--r--math/polymake/Makefile8
-rw-r--r--math/py-cmaes/Makefile2
-rw-r--r--math/py-cmaes/distinfo6
-rw-r--r--math/py-grandalf/Makefile1
-rw-r--r--math/py-narwhals/Makefile4
-rw-r--r--math/py-narwhals/distinfo6
-rw-r--r--math/py-pandas-datareader/Makefile4
-rw-r--r--math/py-vector/Makefile18
-rw-r--r--math/py-vector/distinfo6
-rw-r--r--math/saga/Makefile4
-rw-r--r--math/saga/distinfo6
-rw-r--r--math/vtk8/Makefile1
41 files changed, 106 insertions, 124 deletions
diff --git a/math/4ti2/Makefile b/math/4ti2/Makefile
index 1de8b4ef38c4..a80b86a0c114 100644
--- a/math/4ti2/Makefile
+++ b/math/4ti2/Makefile
@@ -1,6 +1,6 @@
PORTNAME= 4ti2
DISTVERSIONPREFIX= Release_
-DISTVERSION= 1_6_10
+DISTVERSION= 1_6_13
CATEGORIES= math
MAINTAINER= yuri@FreeBSD.org
@@ -13,10 +13,12 @@ LICENSE_FILE= ${WRKSRC}/COPYING
LIB_DEPENDS= libglpk.so:math/glpk \
libgmp.so:math/gmp
-USES= autoreconf compiler:c++11-lang gmake libtool
+USES= autoreconf compiler:c++11-lang gmake libtool shebangfix
USE_GITHUB= yes
USE_LDCONFIG= yes
+SHEBANG_FILES= test/check.template.in
+
GNU_CONFIGURE= yes
CONFIGURE_ARGS= --disable-static --enable-shared --with-glpk=${LOCALBASE} --with-gmp=${LOCALBASE}
diff --git a/math/4ti2/distinfo b/math/4ti2/distinfo
index c5266ed4badb..1d0872a1335c 100644
--- a/math/4ti2/distinfo
+++ b/math/4ti2/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1682583538
-SHA256 (4ti2-4ti2-Release_1_6_10_GH0.tar.gz) = 2f1bce3203da65b651d68cbd0ace0f89a16d1f436cf5f24e22bc15ec22df936a
-SIZE (4ti2-4ti2-Release_1_6_10_GH0.tar.gz) = 5005427
+TIMESTAMP = 1753038439
+SHA256 (4ti2-4ti2-Release_1_6_13_GH0.tar.gz) = 37b36536f0b9185afa8e0c9badf6a6b5277b7a4a8409726d599cf254946e94fa
+SIZE (4ti2-4ti2-Release_1_6_13_GH0.tar.gz) = 4991075
diff --git a/math/R-cran-DEoptimR/Makefile b/math/R-cran-DEoptimR/Makefile
index 031e4730b63a..b364f03db52c 100644
--- a/math/R-cran-DEoptimR/Makefile
+++ b/math/R-cran-DEoptimR/Makefile
@@ -1,11 +1,11 @@
PORTNAME= DEoptimR
-DISTVERSION= 1.1-3-1
+DISTVERSION= 1.1-4
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
MAINTAINER= eduardo@FreeBSD.org
COMMENT= Differential Evolution Optimization in Pure R
-WWW= https://cran.r-project.org/web/packages/DEoptimR/
+WWW= https://cran.r-project.org/package=DEoptimR
LICENSE= GPLv2+
diff --git a/math/R-cran-DEoptimR/distinfo b/math/R-cran-DEoptimR/distinfo
index e12c6b710ac0..2df1c48dd2ad 100644
--- a/math/R-cran-DEoptimR/distinfo
+++ b/math/R-cran-DEoptimR/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1735919317
-SHA256 (DEoptimR_1.1-3-1.tar.gz) = 586b7342bd8692314b0870369caf03c26f4e94fef39677dbaa2c5acc9ec072a2
-SIZE (DEoptimR_1.1-3-1.tar.gz) = 19536
+TIMESTAMP = 1753716629
+SHA256 (DEoptimR_1.1-4.tar.gz) = 5a1bdd10d6f75e77e91bed0568e7be9f08dd2996a0b2ca2b3c80a71626e602a2
+SIZE (DEoptimR_1.1-4.tar.gz) = 19586
diff --git a/math/R-cran-pbkrtest/Makefile b/math/R-cran-pbkrtest/Makefile
index 4c5ee41dd81b..3d1536c57692 100644
--- a/math/R-cran-pbkrtest/Makefile
+++ b/math/R-cran-pbkrtest/Makefile
@@ -1,5 +1,5 @@
PORTNAME= pbkrtest
-DISTVERSION= 0.5.4
+DISTVERSION= 0.5.5
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-pbkrtest/distinfo b/math/R-cran-pbkrtest/distinfo
index 72889b767954..30927bfa2864 100644
--- a/math/R-cran-pbkrtest/distinfo
+++ b/math/R-cran-pbkrtest/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1746004088
-SHA256 (pbkrtest_0.5.4.tar.gz) = cd463ff5766c340f576366e45e7a44498e3017083df9c02f332510f8a423d822
-SIZE (pbkrtest_0.5.4.tar.gz) = 75868
+TIMESTAMP = 1753012743
+SHA256 (pbkrtest_0.5.5.tar.gz) = d26c8ef0a6fd73bba184bde8e3434439d62539d93aef0a0b5b480a0f309bc51b
+SIZE (pbkrtest_0.5.5.tar.gz) = 77353
diff --git a/math/R-cran-terra/Makefile b/math/R-cran-terra/Makefile
index ba6e77decc65..6cf421ca8011 100644
--- a/math/R-cran-terra/Makefile
+++ b/math/R-cran-terra/Makefile
@@ -1,5 +1,5 @@
PORTNAME= terra
-DISTVERSION= 1.8-54
+DISTVERSION= 1.8-60
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-terra/distinfo b/math/R-cran-terra/distinfo
index 111d619ec6fc..a2ff24f11e8e 100644
--- a/math/R-cran-terra/distinfo
+++ b/math/R-cran-terra/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1748855908
-SHA256 (terra_1.8-54.tar.gz) = 3d43dafa6dd7bf8cb52cb63e740eb418fc35c7cb01731f0a637d6ee85999138c
-SIZE (terra_1.8-54.tar.gz) = 1045074
+TIMESTAMP = 1753717458
+SHA256 (terra_1.8-60.tar.gz) = de8ea8bb116b668146dba8668209864f992117a8e2b7e3b109502f545bce8c23
+SIZE (terra_1.8-60.tar.gz) = 1046067
diff --git a/math/R-cran-terra/files/patch-i386 b/math/R-cran-terra/files/patch-i386
deleted file mode 100644
index ba6c983cb12d..000000000000
--- a/math/R-cran-terra/files/patch-i386
+++ /dev/null
@@ -1,45 +0,0 @@
-From 891bb07da1152988225d1f1cfac75aabfa40df62 Mon Sep 17 00:00:00 2001
-From: rhijmans <r.hijmans@gmail.com>
-Date: Tue, 3 Jun 2025 07:51:14 -0700
-Subject: [PATCH] for #1846
-
----
- src/gdal_multidimensional.cpp | 10 ++++++++--
- 1 file changed, 8 insertions(+), 2 deletions(-)
-
-diff --git src/gdal_multidimensional.cpp src/gdal_multidimensional.cpp
-index 7116212a9..42049f59a 100644
---- src/gdal_multidimensional.cpp
-+++ src/gdal_multidimensional.cpp
-@@ -9,6 +9,11 @@
- #include "file_utils.h"
- #include "vecmath.h"
-
-+#if defined(_WIN64) || defined(__x86_64__) || defined(__ppc64__) || defined(__aarch64__) || defined(__MINGW64__) || defined(__amd64__)
-+ #define IS_64_BIT
-+#endif
-+
-+
- bool parse_ncdf_time(SpatRasterSource &s, const std::string unit, const std::string calendar, std::vector<double> raw, std::string &msg) {
-
- std::vector<int_64> out;
-@@ -179,7 +184,7 @@ bool parse_ncdf_time(SpatRasterSource &s, const std::string unit, const std::str
-
-
-
--#if GDAL_VERSION_MAJOR >= 3 && GDAL_VERSION_MINOR >= 4
-+#if GDAL_VERSION_MAJOR >= 3 && GDAL_VERSION_MINOR >= 4 && defined(IS_64_BIT)
-
-
- std::vector<std::string> GetArrayNames(std::shared_ptr<GDALGroup> x, bool filter) {
-@@ -804,8 +809,9 @@ bool SpatRaster::writeStopMulti() {
- #else
-
-
-+
- bool SpatRaster::constructFromFileMulti(std::string fname, std::vector<int> subds, std::vector<std::string> subname, std::vector<std::string> drivers, std::vector<std::string> options, std::vector<int> dims, bool noflip, bool guessCRS, std::vector<std::string> domains) {
-- setError("multidim is not supported with GDAL < 3.4");
-+ setError("multidim is not supported with GDAL < 3.4 or on 32 bit systems");
- return false;
- }
-
diff --git a/math/armadillo/Makefile b/math/armadillo/Makefile
index 38d611477039..17eb1f689968 100644
--- a/math/armadillo/Makefile
+++ b/math/armadillo/Makefile
@@ -1,5 +1,5 @@
PORTNAME= armadillo
-PORTVERSION= 14.6.0
+PORTVERSION= 14.6.1
CATEGORIES= math
MASTER_SITES= SF/arma
diff --git a/math/armadillo/distinfo b/math/armadillo/distinfo
index f2d240074241..7235cfc3f1f3 100644
--- a/math/armadillo/distinfo
+++ b/math/armadillo/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1752266016
-SHA256 (armadillo-14.6.0.tar.xz) = d18ccdb78a5da88f18fc529d8a8d40fad455842be6b01c59796f47a6f5bc7fe5
-SIZE (armadillo-14.6.0.tar.xz) = 7159176
+TIMESTAMP = 1753265704
+SHA256 (armadillo-14.6.1.tar.xz) = bec67f368fc61673c4c9e9429d20135a42ba80a2c7f8592b912e5f97e289bfc0
+SIZE (armadillo-14.6.1.tar.xz) = 7159088
diff --git a/math/libRmath/Makefile b/math/libRmath/Makefile
index 738505b84176..f5503790e57f 100644
--- a/math/libRmath/Makefile
+++ b/math/libRmath/Makefile
@@ -1,10 +1,10 @@
PORTNAME= libRmath
-DISTVERSION= 4.4.3
+DISTVERSION= 4.5.1
CATEGORIES= math lang
MASTER_SITES= CRAN/src/base/R-${DISTVERSION:C|\..*||}
DISTNAME= R-${DISTVERSIONPREFIX}${DISTVERSION}${DISTVERSIONSUFFIX}
-MAINTAINER= alster@vinterdalen.se
+MAINTAINER= alven@FreeBSD.org
COMMENT= Standalone math library from R
WWW= https://www.R-project.org/
diff --git a/math/libRmath/distinfo b/math/libRmath/distinfo
index 90cc1ab5a849..b830a3e2ed3f 100644
--- a/math/libRmath/distinfo
+++ b/math/libRmath/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1741214828
-SHA256 (R-4.4.3.tar.gz) = 0d93d224442dea253c2b086f088db6d0d3cfd9b592cd5496e8cb2143e90fc9e8
-SIZE (R-4.4.3.tar.gz) = 40234425
+TIMESTAMP = 1753570849
+SHA256 (R-4.5.1.tar.gz) = b42a7921400386645b10105b91c68728787db5c4c83c9f6c30acdce632e1bb70
+SIZE (R-4.5.1.tar.gz) = 40518816
diff --git a/math/maxima/Makefile b/math/maxima/Makefile
index 420415b60368..929f311b5873 100644
--- a/math/maxima/Makefile
+++ b/math/maxima/Makefile
@@ -1,6 +1,6 @@
PORTNAME= maxima
DISTVERSION= 5.47.0
-PORTREVISION= 26
+PORTREVISION= 27
CATEGORIES= math lisp tk
MASTER_SITES= SF/maxima/Maxima-source/${PORTVERSION}-source
diff --git a/math/mdal/Makefile b/math/mdal/Makefile
index f7816901df5a..1ef54c326153 100644
--- a/math/mdal/Makefile
+++ b/math/mdal/Makefile
@@ -14,12 +14,11 @@ LICENSE_FILE= ${WRKSRC}/LICENSE
BUILD_DEPENDS= ${LOCALBASE}/include/gtest/gtest.h:devel/googletest
LIB_DEPENDS= libpdalcpp.so:math/pdal \
libnetcdf.so:science/netcdf \
- libsqlite3.so:databases/sqlite3 \
libgdal.so:graphics/gdal \
libhdf5.so:science/hdf5 \
libsz.so:science/libaec
-USES= cmake gnome localbase
+USES= cmake gnome localbase sqlite
USE_GNOME= libxml2
USE_LDCONFIG= yes
diff --git a/math/mumps/Makefile b/math/mumps/Makefile
index b29eafb76216..cbc3ca9987b3 100644
--- a/math/mumps/Makefile
+++ b/math/mumps/Makefile
@@ -6,7 +6,7 @@ PKGNAMESUFFIX= -edf
MAINTAINER= thierry@FreeBSD.org
COMMENT= MUltifrontal Massively Parallel sparse direct Solver for Code_Aster
-WWW= https://graal.ens-lyon.fr/MUMPS/
+WWW= https://mumps-solver.org/
LICENSE= CeCILL_C
LICENSE_NAME= CeCILL-C
diff --git a/math/mumps4/Makefile b/math/mumps4/Makefile
index 987e16064327..72ab350a3fbf 100644
--- a/math/mumps4/Makefile
+++ b/math/mumps4/Makefile
@@ -10,7 +10,7 @@ DISTNAME= MUMPS_${PORTVERSION}
MAINTAINER= ports@FreeBSD.org
COMMENT= MUltifrontal Massively Parallel sparse direct Solver
-WWW= https://graal.ens-lyon.fr/MUMPS/
+WWW= https://mumps-solver.org/
LICENSE= PD
LICENSE_FILE= ${WRKSRC}/LICENSE
diff --git a/math/octave-forge-csg-toolkit/Makefile b/math/octave-forge-csg-toolkit/Makefile
index c7283d0ebe64..153a5a1adca7 100644
--- a/math/octave-forge-csg-toolkit/Makefile
+++ b/math/octave-forge-csg-toolkit/Makefile
@@ -1,6 +1,6 @@
PORTNAME= octave-forge-csg-toolkit
DISTVERSIONPREFIX= v
-DISTVERSION= 1.4.2
+DISTVERSION= 1.4.3
CATEGORIES= math
MAINTAINER= stephen@FreeBSD.org
@@ -18,8 +18,6 @@ USE_GITHUB= yes
GH_ACCOUNT= pr0m1th3as
GH_PROJECT= ${OCTAVE_PKGNAME}
-CXXFLAGS+= -stdlib=libstdc++
-
OCTAVE_SRC= ${GH_PROJECT}-${DISTVERSION}
.include <bsd.port.mk>
diff --git a/math/octave-forge-csg-toolkit/distinfo b/math/octave-forge-csg-toolkit/distinfo
index 57757322355b..5e2b2beb5f84 100644
--- a/math/octave-forge-csg-toolkit/distinfo
+++ b/math/octave-forge-csg-toolkit/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1747750196
-SHA256 (octave-forge/pr0m1th3as-csg-toolkit-v1.4.2_GH0.tar.gz) = 56fabd89edb550166aaeb7322b678721ad33864fe60b9e8602f596c91207e3b9
-SIZE (octave-forge/pr0m1th3as-csg-toolkit-v1.4.2_GH0.tar.gz) = 2159689
+TIMESTAMP = 1752819931
+SHA256 (octave-forge/pr0m1th3as-csg-toolkit-v1.4.3_GH0.tar.gz) = cc65e5d6b14f6678739f59119a726dbe0545da8ee662052f6adb3a02ad72ca44
+SIZE (octave-forge/pr0m1th3as-csg-toolkit-v1.4.3_GH0.tar.gz) = 2182368
diff --git a/math/octave-forge-datatypes/Makefile b/math/octave-forge-datatypes/Makefile
index ef3bd1633c2d..88680220a89d 100644
--- a/math/octave-forge-datatypes/Makefile
+++ b/math/octave-forge-datatypes/Makefile
@@ -1,6 +1,6 @@
PORTNAME= octave-forge-datatypes
DISTVERSIONPREFIX= release-
-DISTVERSION= 1.0.5
+DISTVERSION= 1.0.7
PORTEPOCH= 1
CATEGORIES= math
diff --git a/math/octave-forge-datatypes/distinfo b/math/octave-forge-datatypes/distinfo
index b1a7004723b1..9bf754b94c55 100644
--- a/math/octave-forge-datatypes/distinfo
+++ b/math/octave-forge-datatypes/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1752697858
-SHA256 (octave-forge/pr0m1th3as-datatypes-release-1.0.5_GH0.tar.gz) = 8224849361e2d758dd97a028c5dd2de3f84e70915b47741a9f27993d90ada3a3
-SIZE (octave-forge/pr0m1th3as-datatypes-release-1.0.5_GH0.tar.gz) = 290834
+TIMESTAMP = 1753473679
+SHA256 (octave-forge/pr0m1th3as-datatypes-release-1.0.7_GH0.tar.gz) = b9c60ef0c51b4aff2f032d385d7d6797ee948e5ff29e934b178952f97b83d113
+SIZE (octave-forge/pr0m1th3as-datatypes-release-1.0.7_GH0.tar.gz) = 300497
diff --git a/math/octave-forge-geometry/Makefile b/math/octave-forge-geometry/Makefile
index 9933cf303500..abdc8e77b362 100644
--- a/math/octave-forge-geometry/Makefile
+++ b/math/octave-forge-geometry/Makefile
@@ -1,6 +1,6 @@
PORTNAME= octave-forge-geometry
PORTVERSION= 4.1.0
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= math
MASTER_SITES= SF/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases
DISTNAME= ${OCTAVE_PKGNAME}-${DISTVERSIONFULL}
@@ -12,7 +12,7 @@ WWW= https://packages.octave.org/
LICENSE= GPLv3
LICENSE_FILE= ${WRKDIR}/${OCTAVE_SRC}/COPYING
-RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}lxml>=0:devel/py-lxml@${PY_FLAVOR} \
+RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}lxml5>=0:devel/py-lxml5@${PY_FLAVOR} \
${OCTAVE_TARBALLS_DIR}/matgeom.tar.gz:math/octave-forge-matgeom
USES= octave python:env
diff --git a/math/octave-forge-pkg-octave-doc/Makefile b/math/octave-forge-pkg-octave-doc/Makefile
index 664d312467f7..e35fc9f8e892 100644
--- a/math/octave-forge-pkg-octave-doc/Makefile
+++ b/math/octave-forge-pkg-octave-doc/Makefile
@@ -1,6 +1,6 @@
PORTNAME= octave-forge-pkg-octave-doc
DISTVERSIONPREFIX= release-
-DISTVERSION= 0.6.1
+DISTVERSION= 0.6.3
CATEGORIES= math
MAINTAINER= stephen@FreeBSD.org
diff --git a/math/octave-forge-pkg-octave-doc/distinfo b/math/octave-forge-pkg-octave-doc/distinfo
index e906fb163a4f..daa141250b7b 100644
--- a/math/octave-forge-pkg-octave-doc/distinfo
+++ b/math/octave-forge-pkg-octave-doc/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1751474732
-SHA256 (octave-forge/gnu-octave-pkg-octave-doc-release-0.6.1_GH0.tar.gz) = 832118658041d0fcd0662a57aaea201c4e857bba20993a67add9b638054e2445
-SIZE (octave-forge/gnu-octave-pkg-octave-doc-release-0.6.1_GH0.tar.gz) = 160024
+TIMESTAMP = 1753397681
+SHA256 (octave-forge/gnu-octave-pkg-octave-doc-release-0.6.3_GH0.tar.gz) = 5d3a949604b98fbf62b2c561e3522caf35105a8816d140295e6ae8b2a53b244c
+SIZE (octave-forge/gnu-octave-pkg-octave-doc-release-0.6.3_GH0.tar.gz) = 160907
diff --git a/math/octave-forge-statistics/Makefile b/math/octave-forge-statistics/Makefile
index 83e5727925d2..3f809a9e270c 100644
--- a/math/octave-forge-statistics/Makefile
+++ b/math/octave-forge-statistics/Makefile
@@ -1,6 +1,6 @@
PORTNAME= octave-forge-statistics
DISTVERSIONPREFIX= release-
-DISTVERSION= 1.7.4
+DISTVERSION= 1.7.5
CATEGORIES= math
MAINTAINER= stephen@FreeBSD.org
diff --git a/math/octave-forge-statistics/distinfo b/math/octave-forge-statistics/distinfo
index 4e4a04d382a2..47feb5b9bbe0 100644
--- a/math/octave-forge-statistics/distinfo
+++ b/math/octave-forge-statistics/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1744659265
-SHA256 (octave-forge/gnu-octave-statistics-release-1.7.4_GH0.tar.gz) = 7fdea950102b1cbf008f0e90b3780bab53a9c70dc447113ddd8d7f9431cf1035
-SIZE (octave-forge/gnu-octave-statistics-release-1.7.4_GH0.tar.gz) = 1307223
+TIMESTAMP = 1753229115
+SHA256 (octave-forge/gnu-octave-statistics-release-1.7.5_GH0.tar.gz) = 5202b7ddf35014577f4d9ddfd11109789dae29f1febaeab1e19d16cdb7d9753c
+SIZE (octave-forge/gnu-octave-statistics-release-1.7.5_GH0.tar.gz) = 1349843
diff --git a/math/p5-Math-Pari/Makefile b/math/p5-Math-Pari/Makefile
index ea6d64f7e86a..333a0f4f2612 100644
--- a/math/p5-Math-Pari/Makefile
+++ b/math/p5-Math-Pari/Makefile
@@ -70,4 +70,10 @@ post-install:
${INSTALL_LIB} ${PARI_WRKSRC}/build/libpari-gmp.so.2.3.5 ${STAGEDIR}${PREFIX}/${SITE_ARCH_REL}/auto/Math/Pari
${LN} -s libpari-gmp.so.2.3.5 ${STAGEDIR}${PREFIX}/${SITE_ARCH_REL}/auto/Math/Pari/libpari-gmp.so.2
-.include <bsd.port.mk>
+.include <bsd.port.pre.mk>
+
+.if ${PERL_LEVEL} >= 504200
+BROKEN= fails to build
+.endif
+
+.include <bsd.port.post.mk>
diff --git a/math/p5-Statistics-CaseResampling/Makefile b/math/p5-Statistics-CaseResampling/Makefile
index 7c23e615a627..045e9ffa6319 100644
--- a/math/p5-Statistics-CaseResampling/Makefile
+++ b/math/p5-Statistics-CaseResampling/Makefile
@@ -1,5 +1,5 @@
PORTNAME= Statistics-CaseResampling
-PORTVERSION= 0.16
+PORTVERSION= 0.17
CATEGORIES= math perl5
MASTER_SITES= CPAN
PKGNAMEPREFIX= p5-
diff --git a/math/p5-Statistics-CaseResampling/distinfo b/math/p5-Statistics-CaseResampling/distinfo
index c6818cb1c083..cd5167e201c4 100644
--- a/math/p5-Statistics-CaseResampling/distinfo
+++ b/math/p5-Statistics-CaseResampling/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1748495735
-SHA256 (Statistics-CaseResampling-0.16.tar.gz) = 91357d42b6bf266e5f378365020953753a9bbf9b99f96c4b9ab25376a54a5b94
-SIZE (Statistics-CaseResampling-0.16.tar.gz) = 58759
+TIMESTAMP = 1753265732
+SHA256 (Statistics-CaseResampling-0.17.tar.gz) = 6ee66d0eed81882ec4fa48fffe163a04fd98c4d56ac1e8cdc14a9f83bd1839bc
+SIZE (Statistics-CaseResampling-0.17.tar.gz) = 58325
diff --git a/math/polymake/Makefile b/math/polymake/Makefile
index 55312ff415cd..193dc3bf8ab4 100644
--- a/math/polymake/Makefile
+++ b/math/polymake/Makefile
@@ -196,4 +196,10 @@ post-install-TESTS-on: test
test:
@cd ${WRKSRC} && HOME=${WRKDIR} perl/polymake --script run_testcases
-.include <bsd.port.mk>
+.include <bsd.port.pre.mk>
+
+.if ${PERL_LEVEL} >= 504200
+BROKEN= polymake has not been checked for compatibility with perl 5.42 or newer
+.endif
+
+.include <bsd.port.post.mk>
diff --git a/math/py-cmaes/Makefile b/math/py-cmaes/Makefile
index 698c9769c833..1e54f4115386 100644
--- a/math/py-cmaes/Makefile
+++ b/math/py-cmaes/Makefile
@@ -1,5 +1,5 @@
PORTNAME= cmaes
-PORTVERSION= 0.11.1
+PORTVERSION= 0.12.0
CATEGORIES= math
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
diff --git a/math/py-cmaes/distinfo b/math/py-cmaes/distinfo
index 293e049eb2aa..12bcb009a4b6 100644
--- a/math/py-cmaes/distinfo
+++ b/math/py-cmaes/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1724084626
-SHA256 (cmaes-0.11.1.tar.gz) = cf71fa3679814723be771f2c9edd85f465b1bc1e409e1ad6d8a9e481efcd5160
-SIZE (cmaes-0.11.1.tar.gz) = 31439
+TIMESTAMP = 1753369398
+SHA256 (cmaes-0.12.0.tar.gz) = 6aab41eee2f38bf917560a7e7d1ba0060632cd44cdf7ac2a10704da994624182
+SIZE (cmaes-0.12.0.tar.gz) = 52779
diff --git a/math/py-grandalf/Makefile b/math/py-grandalf/Makefile
index d0e8f8ad7eec..9539a066d981 100644
--- a/math/py-grandalf/Makefile
+++ b/math/py-grandalf/Makefile
@@ -1,5 +1,6 @@
PORTNAME= grandalf
DISTVERSION= 0.8
+PORTREVISION= 1
CATEGORIES= math python
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
diff --git a/math/py-narwhals/Makefile b/math/py-narwhals/Makefile
index 5777052a57e3..d1e9a8cd09c6 100644
--- a/math/py-narwhals/Makefile
+++ b/math/py-narwhals/Makefile
@@ -1,5 +1,5 @@
PORTNAME= narwhals
-PORTVERSION= 1.46.0
+PORTVERSION= 1.48.0
CATEGORIES= math python
MASTER_SITES= PYPI \
https://github.com/narwhals-dev/narwhals/releases/download/v${PORTVERSION}/
@@ -34,7 +34,7 @@ DUCKDB_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}duckdb>=1.0:databases/py-duckdb@${PY_
PANDAS_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pandas>=1.1.3,1:math/py-pandas@${PY_FLAVOR}
MODIN_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}modin>=0:math/py-modin@${PY_FLAVOR}
POLARS_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}polars>=0.20.4:misc/py-polars@${PY_FLAVOR}
-PYARROW_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pyarrow>=11.0.0:databases/py-pyarrow@${PY_FLAVOR}
+PYARROW_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pyarrow>=13.0.0:databases/py-pyarrow@${PY_FLAVOR}
SQLFRAME_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}sqlframe>=3.22.0:databases/py-sqlframe@${PY_FLAVOR}
.include <bsd.port.mk>
diff --git a/math/py-narwhals/distinfo b/math/py-narwhals/distinfo
index 9aafed610074..ac9d951029e4 100644
--- a/math/py-narwhals/distinfo
+++ b/math/py-narwhals/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1752266156
-SHA256 (narwhals-1.46.0.tar.gz) = fd7e53860b233c2b5566d8b4e1b3e8e9c01b5a87649a9f9a322742000f207a60
-SIZE (narwhals-1.46.0.tar.gz) = 512060
+TIMESTAMP = 1753265778
+SHA256 (narwhals-1.48.0.tar.gz) = 7243b456cbdb60edb148731a8f9b203f473a373a249ad66c699362508730e63f
+SIZE (narwhals-1.48.0.tar.gz) = 515112
diff --git a/math/py-pandas-datareader/Makefile b/math/py-pandas-datareader/Makefile
index 82f4f3440d19..4e941b803578 100644
--- a/math/py-pandas-datareader/Makefile
+++ b/math/py-pandas-datareader/Makefile
@@ -1,6 +1,6 @@
PORTNAME= pandas-datareader
DISTVERSION= 0.9.0
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= math finance python
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -12,7 +12,7 @@ WWW= https://github.com/pydata/pandas-datareader
LICENSE= BSD3CLAUSE
LICENSE_FILE= ${WRKSRC}/LICENSE.md
-RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}lxml>0:devel/py-lxml@${PY_FLAVOR} \
+RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}lxml5>0:devel/py-lxml5@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}pandas>0.19.2:math/py-pandas@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}requests>=2.3.0:www/py-requests@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}requests-file>0:www/py-requests-file@${PY_FLAVOR} \
diff --git a/math/py-vector/Makefile b/math/py-vector/Makefile
index 92317737cf8e..2bff38f7fe8f 100644
--- a/math/py-vector/Makefile
+++ b/math/py-vector/Makefile
@@ -1,5 +1,5 @@
PORTNAME= vector
-PORTVERSION= 1.6.2
+PORTVERSION= 1.6.3
CATEGORIES= math python
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -22,4 +22,18 @@ USE_PYTHON= autoplist concurrent pep517
NO_ARCH= yes
-.include <bsd.port.mk>
+OPTIONS_DEFINE= AWKWARD NUMBA SYMPY
+AWKWARD_DESC= Awkward arrays
+NUMBA_DESC= Numba-compiled functions
+SYMPY_DESC= SymPy expressions
+
+AWKWARD_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}awkward>=2:math/py-awkward@${PY_FLAVOR}
+SYMPY_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}sympy>=0:math/py-sympy@${PY_FLAVOR}
+
+.include <bsd.port.pre.mk>
+
+.if ${PORT_OPTIONS:MNUMBA} && ${PYTHON_REL} < 31400
+RUN_DEPENDS+= ${PYTHON_PKGNAMEPREFIX}numba>=0.57:devel/py-numba@${PY_FLAVOR}
+.endif
+
+.include <bsd.port.post.mk>
diff --git a/math/py-vector/distinfo b/math/py-vector/distinfo
index 5a820226b82a..be8472579db3 100644
--- a/math/py-vector/distinfo
+++ b/math/py-vector/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1747715288
-SHA256 (vector-1.6.2.tar.gz) = 6e59d9db8b615016fa542a2e8150d0c819046fe6940badd267811a454a7f0eca
-SIZE (vector-1.6.2.tar.gz) = 350018
+TIMESTAMP = 1753265780
+SHA256 (vector-1.6.3.tar.gz) = a85149a62fcaa8a4d95214ca217f3910ea6800d79d65ef1cfb1005720b4f713a
+SIZE (vector-1.6.3.tar.gz) = 352886
diff --git a/math/saga/Makefile b/math/saga/Makefile
index a42c4530474d..4816be5c055e 100644
--- a/math/saga/Makefile
+++ b/math/saga/Makefile
@@ -1,5 +1,5 @@
PORTNAME= saga
-PORTVERSION= 9.9.0
+PORTVERSION= 9.9.1
CATEGORIES= math
MASTER_SITES= SF/saga-gis/SAGA%20-%20${PORTVERSION:C/\.[[:digit:]]\.[[:digit:]]*$//}/SAGA%20-%20${PORTVERSION}
@@ -35,7 +35,7 @@ DOS2UNIX_GLOB= *.cpp *.h
USE_LDCONFIG= yes
USE_WX= 3.2+
-GIT_TAGNAME= c415d8804
+GIT_TAGNAME= f41608881
CMAKE_ARGS= -DSVM_INCLUDE:PATH=${LOCALBASE}/include/svm.h
CMAKE_ON= CMAKE_VERBOSE_MAKEFILE
diff --git a/math/saga/distinfo b/math/saga/distinfo
index 4dc84b16723e..f17c2ff8d063 100644
--- a/math/saga/distinfo
+++ b/math/saga/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1752735353
-SHA256 (saga-9.9.0.tar.gz) = c52f61f101a6e8f1fcaf1d2a5e6be8943a47f5fcbc99aec794155b428e695f84
-SIZE (saga-9.9.0.tar.gz) = 10699213
+TIMESTAMP = 1753265252
+SHA256 (saga-9.9.1.tar.gz) = 227ca9c950a4d3cb6c07229a2014455a5770473d4090d0a0143dc32f8386f38c
+SIZE (saga-9.9.1.tar.gz) = 10699714
diff --git a/math/vtk8/Makefile b/math/vtk8/Makefile
index d0a3a97bdb2d..06d0030f5f76 100644
--- a/math/vtk8/Makefile
+++ b/math/vtk8/Makefile
@@ -12,6 +12,7 @@ WWW= https://www.vtk.org
LICENSE= BSD3CLAUSE
+BROKEN_FreeBSD_13= complation fails: error: no member named 'derived' in 'Transpose<TranspositionsBase<type-parameter-0-0>>'
BROKEN_FreeBSD_15= complation fails: error: no member named 'derived' in 'Transpose<TranspositionsBase<type-parameter-0-0>>'
LIB_DEPENDS= libtiff.so:graphics/tiff \