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-rw-r--r--math/Makefile3
-rw-r--r--math/R-cran-mpoly/Makefile2
-rw-r--r--math/R-cran-polyclip/Makefile14
-rw-r--r--math/R-cran-polyclip/distinfo3
-rw-r--r--math/R-cran-polyclip/pkg-descr6
-rw-r--r--math/armadillo/Makefile2
-rw-r--r--math/armadillo/distinfo6
-rw-r--r--math/cimod/Makefile9
-rw-r--r--math/cimod/distinfo6
-rw-r--r--math/cimod/files/patch-external_googletest.cmake47
-rw-r--r--math/cimod/pkg-descr9
-rw-r--r--math/fast_float/Makefile2
-rw-r--r--math/fast_float/distinfo6
-rw-r--r--math/hexowl/Makefile2
-rw-r--r--math/mlpack/Makefile9
-rw-r--r--math/mlpack/distinfo6
-rw-r--r--math/mlpack/pkg-plist18
-rw-r--r--math/octave-forge-joystick/Makefile26
-rw-r--r--math/octave-forge-joystick/distinfo3
-rw-r--r--math/octave-forge-joystick/pkg-descr8
-rw-r--r--math/octave-forge-odbc/Makefile3
-rw-r--r--math/octave-forge-odbc/distinfo6
-rw-r--r--math/octave-forge-sqlite/Makefile3
-rw-r--r--math/octave-forge-sqlite/distinfo6
-rw-r--r--math/octave-forge/Makefile4
-rw-r--r--math/openfst/Makefile4
-rw-r--r--math/py-fastcluster/Makefile5
-rw-r--r--math/py-fastcluster/distinfo6
-rw-r--r--math/py-fastcluster/files/patch-pyproject.toml8
-rw-r--r--math/py-fastcluster/files/patch-setup.py11
-rw-r--r--math/py-jij-cimod/Makefile34
-rw-r--r--math/py-jij-cimod/distinfo3
-rw-r--r--math/py-jij-cimod/files/patch-CMakeLists.txt20
-rw-r--r--math/py-jij-cimod/files/patch-pyproject.toml11
-rw-r--r--math/py-jij-cimod/pkg-descr7
-rw-r--r--math/py-narwhals/Makefile2
-rw-r--r--math/py-narwhals/distinfo6
-rw-r--r--math/py-numexpr/Makefile2
-rw-r--r--math/py-numexpr/distinfo6
-rw-r--r--math/py-numpy/Makefile2
-rw-r--r--math/py-scs/Makefile7
-rw-r--r--math/py-scs/distinfo6
-rw-r--r--math/py-scs/files/patch-pyproject.toml8
-rw-r--r--math/rkward/Makefile9
-rw-r--r--math/rkward/distinfo6
-rw-r--r--math/rkward/files/patch-rkward_windows_rktoolwindowbar.cpp4
-rw-r--r--math/rkward/pkg-plist104
-rw-r--r--math/scs/Makefile3
-rw-r--r--math/scs/distinfo6
-rw-r--r--math/scs/pkg-plist1
50 files changed, 302 insertions, 188 deletions
diff --git a/math/Makefile b/math/Makefile
index 767ab0544753..c53eb5072daf 100644
--- a/math/Makefile
+++ b/math/Makefile
@@ -118,6 +118,7 @@
SUBDIR += R-cran-pbkrtest
SUBDIR += R-cran-plot3D
SUBDIR += R-cran-pls
+ SUBDIR += R-cran-polyclip
SUBDIR += R-cran-polycor
SUBDIR += R-cran-polynom
SUBDIR += R-cran-pracma
@@ -603,6 +604,7 @@
SUBDIR += octave-forge-interval
SUBDIR += octave-forge-io
SUBDIR += octave-forge-irsa
+ SUBDIR += octave-forge-joystick
SUBDIR += octave-forge-level-set
SUBDIR += octave-forge-linear-algebra
SUBDIR += octave-forge-lssa
@@ -1015,6 +1017,7 @@
SUBDIR += py-isosurfaces
SUBDIR += py-jacobi
SUBDIR += py-jax
+ SUBDIR += py-jij-cimod
SUBDIR += py-kahip
SUBDIR += py-keras
SUBDIR += py-keras-applications
diff --git a/math/R-cran-mpoly/Makefile b/math/R-cran-mpoly/Makefile
index 93cfd3daa088..8b6a078bd56c 100644
--- a/math/R-cran-mpoly/Makefile
+++ b/math/R-cran-mpoly/Makefile
@@ -1,7 +1,7 @@
PORTNAME= mpoly
DISTVERSION= 1.1.2
CATEGORIES= math
-DISTNAME= ${PORTNAME}_${PORTVERSION}
+DISTNAME= ${PORTNAME}_${DISTVERSION}
MAINTAINER= uzsolt@FreeBSD.org
COMMENT= Symbolic computing with multivariate polynomials in R
diff --git a/math/R-cran-polyclip/Makefile b/math/R-cran-polyclip/Makefile
new file mode 100644
index 000000000000..bc0153feff28
--- /dev/null
+++ b/math/R-cran-polyclip/Makefile
@@ -0,0 +1,14 @@
+PORTNAME= polyclip
+DISTVERSION= 1.10-7
+CATEGORIES= math
+DISTNAME= ${PORTNAME}_${DISTVERSION}
+
+MAINTAINER= uzsolt@FreeBSD.org
+COMMENT= Polygon Clipping
+WWW= https://cran.r-project.org/package=${PORTNAME}
+
+LICENSE= BSL
+
+USES= cran:auto-plist,compiles
+
+.include <bsd.port.mk>
diff --git a/math/R-cran-polyclip/distinfo b/math/R-cran-polyclip/distinfo
new file mode 100644
index 000000000000..5c5b78686ced
--- /dev/null
+++ b/math/R-cran-polyclip/distinfo
@@ -0,0 +1,3 @@
+TIMESTAMP = 1760329898
+SHA256 (polyclip_1.10-7.tar.gz) = f58eaac3a5b2f6711c0c5f12fff91cf80a245ae45878f7217880ab062b5550d3
+SIZE (polyclip_1.10-7.tar.gz) = 80102
diff --git a/math/R-cran-polyclip/pkg-descr b/math/R-cran-polyclip/pkg-descr
new file mode 100644
index 000000000000..eccd5e35ce53
--- /dev/null
+++ b/math/R-cran-polyclip/pkg-descr
@@ -0,0 +1,6 @@
+R port of Angus Johnson's open source library 'Clipper'. Performs polygon
+clipping operations (intersection, union, set minus, set difference) for
+polygonal regions of arbitrary complexity, including holes. Computes offset
+polygons (spatial buffer zones, morphological dilations, Minkowski dilations)
+for polygonal regions and polygonal lines. Computes Minkowski Sum of general
+polygons. There is a function for removing self-intersections from polygon data.
diff --git a/math/armadillo/Makefile b/math/armadillo/Makefile
index 0937b2c95690..4c7ab64d53eb 100644
--- a/math/armadillo/Makefile
+++ b/math/armadillo/Makefile
@@ -1,5 +1,5 @@
PORTNAME= armadillo
-PORTVERSION= 15.0.2
+PORTVERSION= 15.0.3
CATEGORIES= math
MASTER_SITES= SF/arma
diff --git a/math/armadillo/distinfo b/math/armadillo/distinfo
index 819092bcf157..7360f335b71d 100644
--- a/math/armadillo/distinfo
+++ b/math/armadillo/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1759324016
-SHA256 (armadillo-15.0.2.tar.xz) = 990ab4ccb7eff1b6d70409e9aa7fa4119877ac5f5d10ba219e98460ab3e4d6eb
-SIZE (armadillo-15.0.2.tar.xz) = 7175652
+TIMESTAMP = 1759816558
+SHA256 (armadillo-15.0.3.tar.xz) = 9f55ec10f0a91fb6479ab4ed2b37a52445aee917706a238d170b5220c022fe43
+SIZE (armadillo-15.0.3.tar.xz) = 7175076
diff --git a/math/cimod/Makefile b/math/cimod/Makefile
index da6b482a1457..811099f57455 100644
--- a/math/cimod/Makefile
+++ b/math/cimod/Makefile
@@ -1,11 +1,12 @@
PORTNAME= cimod
DISTVERSIONPREFIX= v
-DISTVERSION= 1.6.2
+DISTVERSION= 1.7.3
CATEGORIES= math
MAINTAINER= yuri@FreeBSD.org
COMMENT= C++ header-only library for a binary quadratic models
-WWW= https://github.com/OpenJij/cimod
+WWW= https://www.openjij.org/ \
+ https://github.com/Jij-Inc/cimod
LICENSE= MIT
LICENSE_FILE= ${WRKSRC}/LICENSE
@@ -17,7 +18,7 @@ TEST_DEPENDS= googletest>0:devel/googletest
USES= cmake:testing compiler:c++17-lang eigen:3,build,run
USE_GITHUB= yes
-GH_ACCOUNT= OpenJij
+GH_ACCOUNT= Jij-Inc
CMAKE_ON= CIMOD_INSTALL # doesn't do anything, see https://github.com/OpenJij/cimod/issues/103
CMAKE_OFF= CIMOD_TEST CIMOD_DOCS
@@ -28,4 +29,6 @@ NO_ARCH= yes
do-install: # see https://github.com/OpenJij/cimod/issues/103
cd ${WRKSRC}/include && ${COPYTREE_SHARE} ${PORTNAME} ${STAGEDIR}${PREFIX}/include
+# tests as of 1.7.3: 100% tests passed, 0 tests failed out of 79
+
.include <bsd.port.mk>
diff --git a/math/cimod/distinfo b/math/cimod/distinfo
index e344c4bc92de..785fc5b72f5c 100644
--- a/math/cimod/distinfo
+++ b/math/cimod/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1709938110
-SHA256 (OpenJij-cimod-v1.6.2_GH0.tar.gz) = 732c10f68d90c9292b411c1148cf0be54b0fb812ec4aa4ba1102514486113ae1
-SIZE (OpenJij-cimod-v1.6.2_GH0.tar.gz) = 139864
+TIMESTAMP = 1760174868
+SHA256 (Jij-Inc-cimod-v1.7.3_GH0.tar.gz) = 066fe6187124da8a7ee250c060bce883828ae33f6e38a3525f72c71a6de44510
+SIZE (Jij-Inc-cimod-v1.7.3_GH0.tar.gz) = 341035
diff --git a/math/cimod/files/patch-external_googletest.cmake b/math/cimod/files/patch-external_googletest.cmake
new file mode 100644
index 000000000000..4a37cdd349ff
--- /dev/null
+++ b/math/cimod/files/patch-external_googletest.cmake
@@ -0,0 +1,47 @@
+--- external/googletest.cmake.orig 2025-01-27 12:00:00 UTC
++++ external/googletest.cmake
+@@ -14,38 +14,11 @@
+
+ include(FetchContent)
+
+-message(CHECK_START "Fetching GoogleTest")
+-list(APPEND CMAKE_MESSAGE_INDENT " ")
+-
+-set(CMAKE_CXX_STANDARD 17)
+-set(FETCHCONTENT_QUIET OFF)
+-
+-#### Google test ####
+-FetchContent_Declare(
+- googletest
+- GIT_REPOSITORY https://github.com/google/googletest
+- GIT_TAG v1.17.0
+- GIT_SHALLOW TRUE
+-)
+-
+-if(WIN32)
+- set(gtest_force_shared_crt ON CACHE BOOL "" FORCE)
+-endif()
+-
+-# Prevent googletest from being installed by using FetchContent_Populate + add_subdirectory with EXCLUDE_FROM_ALL
+-FetchContent_GetProperties(googletest)
+-if(NOT googletest_POPULATED)
+- FetchContent_Populate(googletest)
+- add_subdirectory(${googletest_SOURCE_DIR} ${googletest_BINARY_DIR} EXCLUDE_FROM_ALL)
+-endif()
+-
++# Try to find pre-installed GoogleTest first
+ find_package(GTest)
+
+-#FetchContent_GetProperties(googletest)
+-
+-#message(STATUS "gtest_SOURCE_DIR = ${gtest_SOURCE_DIR}")
+-#message(STATUS "gmock_SOURCE_DIR = ${gmock_SOURCE_DIR}")
+-
+-
+-list(POP_BACK CMAKE_MESSAGE_INDENT)
+-message(CHECK_PASS "fetched")
++if(NOT GTest_FOUND)
++ message(FATAL_ERROR "GoogleTest not found. Please install googletest package.")
++else()
++ message(STATUS "Found pre-installed GoogleTest")
++endif()
diff --git a/math/cimod/pkg-descr b/math/cimod/pkg-descr
index f588a9340f2f..eb48d39c4b1e 100644
--- a/math/cimod/pkg-descr
+++ b/math/cimod/pkg-descr
@@ -1 +1,8 @@
-cmod is a C++ library for a binary quadratic model.
+Cimod is a C++ header-only library for a binary quadratic model (BQM),
+which is a model of variables that can be in one of two states (0 or 1,
+or -1 or 1). BQMs are used to represent a wide range of optimization
+problems, and are particularly important in the context of quantum
+annealing and other heuristic optimization algorithms.
+
+This library provides tools to create and manipulate BQM instances,
+making it easier to work with these models in C++ applications.
diff --git a/math/fast_float/Makefile b/math/fast_float/Makefile
index 00deb860d3dd..f40cf615b2df 100644
--- a/math/fast_float/Makefile
+++ b/math/fast_float/Makefile
@@ -1,5 +1,5 @@
PORTNAME= fast_float
-PORTVERSION= 8.0.2
+PORTVERSION= 8.1.0
DISTVERSIONPREFIX= v
CATEGORIES= math
diff --git a/math/fast_float/distinfo b/math/fast_float/distinfo
index 86b57c59ac44..4818bf6cc9e4 100644
--- a/math/fast_float/distinfo
+++ b/math/fast_float/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1742070266
-SHA256 (fastfloat-fast_float-v8.0.2_GH0.tar.gz) = e14a33089712b681d74d94e2a11362643bd7d769ae8f7e7caefe955f57f7eacd
-SIZE (fastfloat-fast_float-v8.0.2_GH0.tar.gz) = 121232
+TIMESTAMP = 1759816560
+SHA256 (fastfloat-fast_float-v8.1.0_GH0.tar.gz) = 4bfabb5979716995090ce68dce83f88f99629bc17ae280eae79311c5340143e1
+SIZE (fastfloat-fast_float-v8.1.0_GH0.tar.gz) = 125830
diff --git a/math/hexowl/Makefile b/math/hexowl/Makefile
index 9afbf93fd1ca..51319e123bc3 100644
--- a/math/hexowl/Makefile
+++ b/math/hexowl/Makefile
@@ -1,7 +1,7 @@
PORTNAME= hexowl
DISTVERSIONPREFIX= v
DISTVERSION= 1.5.1
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math
MAINTAINER= olgeni@FreeBSD.org
diff --git a/math/mlpack/Makefile b/math/mlpack/Makefile
index c614af9212fe..87818d118d10 100644
--- a/math/mlpack/Makefile
+++ b/math/mlpack/Makefile
@@ -1,5 +1,5 @@
PORTNAME= mlpack
-DISTVERSION= 4.5.1
+DISTVERSION= 4.6.2
CATEGORIES= math # machine-learning
MASTER_SITES= https://mlpack.org/files/
@@ -11,8 +11,6 @@ WWW= https://www.mlpack.org/ \
LICENSE= BSD3CLAUSE
LICENSE_FILE= ${WRKSRC}/LICENSE.txt
-BROKEN_FreeBSD_13= compilation fails with clang-19, see https://github.com/mlpack/mlpack/issues/3825
-BROKEN_FreeBSD_15= compilation fails with clang-19, see https://github.com/mlpack/mlpack/issues/3825
BROKEN_i386= undefined symbol: __atomic_load
HPP_DEPENDS= armadillo>0:math/armadillo \
@@ -22,7 +20,10 @@ HPP_DEPENDS= armadillo>0:math/armadillo \
BUILD_DEPENDS= ${HPP_DEPENDS}
RUN_DEPENDS= ${HPP_DEPENDS}
-USES= cmake:testing compiler:c++14-lang pkgconfig
+USES= cmake:testing compiler:c++17-lang pkgconfig
+USE_CXXSTD= c++17
+
+CXXFLAGS+= -Wno-missing-template-arg-list-after-template-kw # workaround for https://github.com/mlpack/mlpack/issues/4016
CMAKE_ARGS= -DSTB_IMAGE_INCLUDE_DIR=${LOCALBASE}/include/stb
CMAKE_OFF= BUILD_PYTHON_BINDINGS BUILD_TESTS
diff --git a/math/mlpack/distinfo b/math/mlpack/distinfo
index c2c0f4a01743..817de403e267 100644
--- a/math/mlpack/distinfo
+++ b/math/mlpack/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1733374998
-SHA256 (mlpack-4.5.1.tar.gz) = 58059b911a78b8bda91eef4cfc6278383b24e71865263c2e0569cf5faa59dda3
-SIZE (mlpack-4.5.1.tar.gz) = 6590839
+TIMESTAMP = 1760161570
+SHA256 (mlpack-4.6.2.tar.gz) = 2fe772da383a935645ced07a07b51942ca178d38129df3bf685890bc3c1752cf
+SIZE (mlpack-4.6.2.tar.gz) = 8144737
diff --git a/math/mlpack/pkg-plist b/math/mlpack/pkg-plist
index 0d7f21ef27ae..406603eb421b 100644
--- a/math/mlpack/pkg-plist
+++ b/math/mlpack/pkg-plist
@@ -91,6 +91,7 @@ include/mlpack/core/data/check_categorical_param.hpp
include/mlpack/core/data/confusion_matrix.hpp
include/mlpack/core/data/confusion_matrix_impl.hpp
include/mlpack/core/data/data.hpp
+include/mlpack/core/data/data_options.hpp
include/mlpack/core/data/dataset_mapper.hpp
include/mlpack/core/data/dataset_mapper_impl.hpp
include/mlpack/core/data/detect_file_type.hpp
@@ -100,6 +101,7 @@ include/mlpack/core/data/format.hpp
include/mlpack/core/data/has_serialize.hpp
include/mlpack/core/data/image_info.hpp
include/mlpack/core/data/image_info_impl.hpp
+include/mlpack/core/data/image_resize_crop.hpp
include/mlpack/core/data/imputation_methods/custom_imputation.hpp
include/mlpack/core/data/imputation_methods/imputation_methods.hpp
include/mlpack/core/data/imputation_methods/listwise_deletion.hpp
@@ -110,14 +112,15 @@ include/mlpack/core/data/is_naninf.hpp
include/mlpack/core/data/load.hpp
include/mlpack/core/data/load_arff.hpp
include/mlpack/core/data/load_arff_impl.hpp
-include/mlpack/core/data/load_categorical_csv.hpp
-include/mlpack/core/data/load_csv.hpp
+include/mlpack/core/data/load_categorical.hpp
+include/mlpack/core/data/load_categorical_impl.hpp
include/mlpack/core/data/load_image.hpp
include/mlpack/core/data/load_image_impl.hpp
include/mlpack/core/data/load_impl.hpp
include/mlpack/core/data/load_model_impl.hpp
-include/mlpack/core/data/load_numeric_csv.hpp
+include/mlpack/core/data/load_numeric.hpp
include/mlpack/core/data/load_vec_impl.hpp
+include/mlpack/core/data/matrix_options.hpp
include/mlpack/core/data/map_policies/datatype.hpp
include/mlpack/core/data/map_policies/increment_policy.hpp
include/mlpack/core/data/map_policies/map_policies.hpp
@@ -150,8 +153,10 @@ include/mlpack/core/data/string_encoding_policies/tf_idf_encoding_policy.hpp
include/mlpack/core/data/tokenizers/char_extract.hpp
include/mlpack/core/data/tokenizers/split_by_any_of.hpp
include/mlpack/core/data/tokenizers/tokenizers.hpp
+include/mlpack/core/data/text_options.hpp
include/mlpack/core/data/types.hpp
include/mlpack/core/data/types_impl.hpp
+include/mlpack/core/data/utilities.hpp
include/mlpack/core/distances/distances.hpp
include/mlpack/core/distances/iou_distance.hpp
include/mlpack/core/distances/ip_metric.hpp
@@ -196,6 +201,10 @@ include/mlpack/core/kernels/pspectrum_string_kernel.hpp
include/mlpack/core/kernels/pspectrum_string_kernel_impl.hpp
include/mlpack/core/kernels/spherical_kernel.hpp
include/mlpack/core/kernels/triangular_kernel.hpp
+include/mlpack/core/stb/bundled/stb_image.h
+include/mlpack/core/stb/bundled/stb_image_resize2.h
+include/mlpack/core/stb/bundled/stb_image_write.h
+include/mlpack/core/stb/stb.hpp
include/mlpack/core/math/ccov.hpp
include/mlpack/core/math/ccov_impl.hpp
include/mlpack/core/math/columns_to_blocks.hpp
@@ -354,6 +363,7 @@ include/mlpack/core/util/backtrace.hpp
include/mlpack/core/util/backtrace_impl.hpp
include/mlpack/core/util/binding_details.hpp
include/mlpack/core/util/conv_to.hpp
+include/mlpack/core/util/distr_param.hpp
include/mlpack/core/util/ens_traits.hpp
include/mlpack/core/util/first_element_is_arma.hpp
include/mlpack/core/util/forward.hpp
@@ -533,6 +543,8 @@ include/mlpack/methods/ann/layer/linear3d_impl.hpp
include/mlpack/methods/ann/layer/linear_impl.hpp
include/mlpack/methods/ann/layer/linear_no_bias.hpp
include/mlpack/methods/ann/layer/linear_no_bias_impl.hpp
+include/mlpack/methods/ann/layer/linear_recurrent.hpp
+include/mlpack/methods/ann/layer/linear_recurrent_impl.hpp
include/mlpack/methods/ann/layer/log_softmax.hpp
include/mlpack/methods/ann/layer/log_softmax_impl.hpp
include/mlpack/methods/ann/layer/lstm.hpp
diff --git a/math/octave-forge-joystick/Makefile b/math/octave-forge-joystick/Makefile
new file mode 100644
index 000000000000..1469177b1b74
--- /dev/null
+++ b/math/octave-forge-joystick/Makefile
@@ -0,0 +1,26 @@
+PORTNAME= octave-forge-joystick
+DISTVERSIONPREFIX= v
+DISTVERSION= 0.0.4
+CATEGORIES= math
+
+MAINTAINER= stephen@FreeBSD.org
+COMMENT= Octave-forge package ${OCTAVE_PKGNAME}
+WWW= https://packages.octave.org/
+
+LICENSE= GPLv3
+LICENSE_FILE= ${WRKDIR}/${OCTAVE_SRC}/COPYING
+
+BUILD_DEPENDS+= cmake:devel/cmake # Required by configure.
+
+LIB_DEPENDS+= libSDL2.so:devel/sdl20
+
+USES= octave autoreconf
+USE_GITHUB= yes
+GH_ACCOUNT= gnu-octave
+GH_PROJECT= octave-joystick
+
+GNU_CONFIGURE= yes
+
+OCTAVE_SRC= ${GH_PROJECT}-${DISTVERSION}
+
+.include <bsd.port.mk>
diff --git a/math/octave-forge-joystick/distinfo b/math/octave-forge-joystick/distinfo
new file mode 100644
index 000000000000..6b7d79577d42
--- /dev/null
+++ b/math/octave-forge-joystick/distinfo
@@ -0,0 +1,3 @@
+TIMESTAMP = 1760386084
+SHA256 (octave-forge/gnu-octave-octave-joystick-v0.0.4_GH0.tar.gz) = 9b54728ca7c67bf098950d757c381a693d94b20b57533a3a44bc3f3c2d50b73c
+SIZE (octave-forge/gnu-octave-octave-joystick-v0.0.4_GH0.tar.gz) = 118692
diff --git a/math/octave-forge-joystick/pkg-descr b/math/octave-forge-joystick/pkg-descr
new file mode 100644
index 000000000000..0422277613d9
--- /dev/null
+++ b/math/octave-forge-joystick/pkg-descr
@@ -0,0 +1,8 @@
+The octave-forge package is the result of The GNU Octave Repository project,
+which is intended to be a central location for custom scripts, functions and
+extensions for GNU Octave. contains the source for all the functions plus
+build and install scripts.
+
+This is joystick.
+
+ Provides basic joystick functions for GNU Octave.
diff --git a/math/octave-forge-odbc/Makefile b/math/octave-forge-odbc/Makefile
index 69ae6709e3e2..a5722946a424 100644
--- a/math/octave-forge-odbc/Makefile
+++ b/math/octave-forge-odbc/Makefile
@@ -1,7 +1,6 @@
PORTNAME= octave-forge-odbc
DISTVERSIONPREFIX= v
-DISTVERSION= 0.0.3
-PORTREVISION= 1
+DISTVERSION= 0.0.4
CATEGORIES= math
MAINTAINER= stephen@FreeBSD.org
diff --git a/math/octave-forge-odbc/distinfo b/math/octave-forge-odbc/distinfo
index 83739a99959f..31451248e0ed 100644
--- a/math/octave-forge-odbc/distinfo
+++ b/math/octave-forge-odbc/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1712697908
-SHA256 (octave-forge/gnu-octave-octave-odbc-v0.0.3_GH0.tar.gz) = 5fe381b39de71a94cbe1720a8426c7fba8a768ebc879c46da71586bb7829a0f8
-SIZE (octave-forge/gnu-octave-octave-odbc-v0.0.3_GH0.tar.gz) = 73900
+TIMESTAMP = 1760301587
+SHA256 (octave-forge/gnu-octave-octave-odbc-v0.0.4_GH0.tar.gz) = 8035794e44bf39b6f4f8ac3fc23918affefb3ef982e7fa97d85721f8bc4850d2
+SIZE (octave-forge/gnu-octave-octave-odbc-v0.0.4_GH0.tar.gz) = 74214
diff --git a/math/octave-forge-sqlite/Makefile b/math/octave-forge-sqlite/Makefile
index bed130e42c10..a6fbd94ffc46 100644
--- a/math/octave-forge-sqlite/Makefile
+++ b/math/octave-forge-sqlite/Makefile
@@ -1,7 +1,6 @@
PORTNAME= octave-forge-sqlite
DISTVERSIONPREFIX= v
-DISTVERSION= 0.1.0
-PORTREVISION= 2
+DISTVERSION= 0.1.1
CATEGORIES= math
MAINTAINER= stephen@FreeBSD.org
diff --git a/math/octave-forge-sqlite/distinfo b/math/octave-forge-sqlite/distinfo
index fee8d519d3d1..34b3b2b703f2 100644
--- a/math/octave-forge-sqlite/distinfo
+++ b/math/octave-forge-sqlite/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1704989987
-SHA256 (octave-forge/gnu-octave-octave-sqlite-v0.1.0_GH0.tar.gz) = 329a49a2a7bf2d74fd31f2a914a14ef064bcb291e2c12828ebf570dc474a4196
-SIZE (octave-forge/gnu-octave-octave-sqlite-v0.1.0_GH0.tar.gz) = 105402
+TIMESTAMP = 1760302134
+SHA256 (octave-forge/gnu-octave-octave-sqlite-v0.1.1_GH0.tar.gz) = 3144ad58c842b1bd4c2bb758141a8732f89b9f57a8aaafee0d8f62a9fbc6010a
+SIZE (octave-forge/gnu-octave-octave-sqlite-v0.1.1_GH0.tar.gz) = 106259
diff --git a/math/octave-forge/Makefile b/math/octave-forge/Makefile
index 618071668765..e019fcf5caa6 100644
--- a/math/octave-forge/Makefile
+++ b/math/octave-forge/Makefile
@@ -1,5 +1,5 @@
PORTNAME= octave-forge
-PORTVERSION= 20251010
+PORTVERSION= 20251013
CATEGORIES= math
MAINTAINER= stephen@FreeBSD.org
@@ -20,7 +20,7 @@ OPTIONS_DEFINE= AUDIO ACTUARIAL AUTOMATIC_DIFFERENTIATION \
GEOMETRY GENERAL \
GENERATE_HTML GNUPLOT GSL HDF5OCT IDENT IMAGE \
INFORMATIONTHEORY INTEGRATION INTERNAL_FLUID_FLOW \
- INTERVAL IO IRSA LEVEL_SET \
+ INTERVAL IO IRSA JOYSTICK LEVEL_SET \
LINEAR_ALGEBRA LSSA LTFAT \
MAPPING MATGEOM \
MBOCT_FEM_PKG MBOCT_MBDYN_PKG MBOCT_NUMERICAL_PKG \
diff --git a/math/openfst/Makefile b/math/openfst/Makefile
index cf0e25329dc6..6e8f6e4c81dd 100644
--- a/math/openfst/Makefile
+++ b/math/openfst/Makefile
@@ -1,5 +1,6 @@
PORTNAME= openfst
DISTVERSION= 1.8.2-20221207
+PORTREVISION= 1
CATEGORIES= math
#MASTER_SITES= http://www.openfst.org/twiki/pub/FST/FstDownload/
@@ -10,10 +11,9 @@ WWW= https://www.openfst.org/ \
LICENSE= APACHE20
-BROKEN_FreeBSD_15= compilation fails with clang-19, see https://github.com/kkm000/openfst/issues/58
-
USES= cmake compiler:c++17-lang
USE_LDCONFIG= yes
+USE_GCC= yes # clang-19 fails to compile it since migration to 14.3
CXXFLAGS_i386= -msse -msse2 -mfpmath=sse
diff --git a/math/py-fastcluster/Makefile b/math/py-fastcluster/Makefile
index f22686d913b8..8f95e54f63e5 100644
--- a/math/py-fastcluster/Makefile
+++ b/math/py-fastcluster/Makefile
@@ -1,6 +1,5 @@
PORTNAME= fastcluster
-PORTVERSION= 1.2.6
-PORTREVISION= 2
+PORTVERSION= 1.3.0
CATEGORIES= math python
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -16,7 +15,7 @@ LICENSE_FILE= ${WRKSRC}/COPYING.txt
BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}numpy>=0,1:math/py-numpy@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}setuptools>=0:devel/py-setuptools@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}wheel>=0:devel/py-wheel@${PY_FLAVOR}
-RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}numpy>=1.9,1:math/py-numpy@${PY_FLAVOR}
+RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}numpy>=0,1:math/py-numpy@${PY_FLAVOR}
USES= compiler python
USE_PYTHON= autoplist concurrent pep517
diff --git a/math/py-fastcluster/distinfo b/math/py-fastcluster/distinfo
index 04df5124a3c2..45f5d1423e2d 100644
--- a/math/py-fastcluster/distinfo
+++ b/math/py-fastcluster/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1647264604
-SHA256 (fastcluster-1.2.6.tar.gz) = aab886efa7b6bba7ac124f4498153d053e5a08b822d2254926b7206cdf5a8aa6
-SIZE (fastcluster-1.2.6.tar.gz) = 173773
+TIMESTAMP = 1759816698
+SHA256 (fastcluster-1.3.0.tar.gz) = d5233aeba5c3faa949c7fa6a39345a09f716ccebbd748541e5735c866696df02
+SIZE (fastcluster-1.3.0.tar.gz) = 173065
diff --git a/math/py-fastcluster/files/patch-pyproject.toml b/math/py-fastcluster/files/patch-pyproject.toml
index a733d01745f2..1b5181373b1a 100644
--- a/math/py-fastcluster/files/patch-pyproject.toml
+++ b/math/py-fastcluster/files/patch-pyproject.toml
@@ -1,8 +1,8 @@
---- pyproject.toml.orig 2022-02-27 10:25:41 UTC
+--- pyproject.toml.orig 2025-05-06 15:48:45 UTC
+++ pyproject.toml
-@@ -10,4 +10,4 @@ requires = ["setuptools",
- # Scipy's "oldest_supported_numpy" package does this work for us.
+@@ -1,4 +1,4 @@ requires = ["setuptools",
+ [build-system]
requires = ["setuptools",
"wheel",
-- "oldest_supported_numpy"]
+- "numpy >= 2"]
+ "numpy"]
diff --git a/math/py-fastcluster/files/patch-setup.py b/math/py-fastcluster/files/patch-setup.py
new file mode 100644
index 000000000000..3c5c064a6fcc
--- /dev/null
+++ b/math/py-fastcluster/files/patch-setup.py
@@ -0,0 +1,11 @@
+--- setup.py.orig 2025-05-06 15:48:45 UTC
++++ setup.py
+@@ -92,7 +92,7 @@ Clustering Routines for R and Python*, Journal of Stat
+ long_description_content_type='text/markdown',
+ python_requires='>=3',
+ requires=['numpy'],
+- install_requires=["numpy>=2"],
++ install_requires=["numpy"],
+ provides=['fastcluster'],
+ ext_modules=[Extension('_fastcluster',
+ ['src/fastcluster_python.cpp'],
diff --git a/math/py-jij-cimod/Makefile b/math/py-jij-cimod/Makefile
new file mode 100644
index 000000000000..52774739c679
--- /dev/null
+++ b/math/py-jij-cimod/Makefile
@@ -0,0 +1,34 @@
+PORTNAME= jij-cimod
+DISTVERSION= 1.7.3
+CATEGORIES= math
+MASTER_SITES= PYPI
+PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
+DISTNAME= ${PORTNAME:S/-/_/}-${DISTVERSION}
+
+MAINTAINER= yuri@FreeBSD.org
+COMMENT= Python binding for the C++ library for a binary quadratic model
+WWW= https://www.openjij.org/ \
+ https://github.com/Jij-Inc/cimod
+
+LICENSE= MIT
+LICENSE_FILE= ${WRKSRC}/LICENSE
+
+BUILD_DEPENDS= ${PYNUMPY} \
+ ${PYTHON_PKGNAMEPREFIX}pybind11>0:devel/py-pybind11@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}scikit-build-core>=0.10:devel/py-scikit-build-core@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}setuptools-scm>0:devel/py-setuptools-scm@${PY_FLAVOR} \
+ nlohmann-json>0:devel/nlohmann-json \
+ pybind11-json>0:devel/pybind11-json
+LIB_DEPENDS= libcblas.so:math/cblas \
+ liblapack.so:math/lapack \
+ libopenblas.so:math/openblas
+
+USES= cmake:indirect compiler:c++17-lang eigen:3 localbase:ldflags python
+USE_PYTHON= pep517 cython autoplist pytest
+
+TEST_WRKSRC= ${WRKSRC}/tests
+TEST_ENV= ${MAKE_ENV} PYTHONPATH=${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}
+
+# tests as of 1.7.3: 49 passed, 10 warnings in 19.01s
+
+.include <bsd.port.mk>
diff --git a/math/py-jij-cimod/distinfo b/math/py-jij-cimod/distinfo
new file mode 100644
index 000000000000..3e3ec24af776
--- /dev/null
+++ b/math/py-jij-cimod/distinfo
@@ -0,0 +1,3 @@
+TIMESTAMP = 1760203654
+SHA256 (jij_cimod-1.7.3.tar.gz) = f8703ef9d8a876e560fce1b78a4fedaf6e30d47889ff2055a2c596e19f04e589
+SIZE (jij_cimod-1.7.3.tar.gz) = 339350
diff --git a/math/py-jij-cimod/files/patch-CMakeLists.txt b/math/py-jij-cimod/files/patch-CMakeLists.txt
new file mode 100644
index 000000000000..68251a0b6c06
--- /dev/null
+++ b/math/py-jij-cimod/files/patch-CMakeLists.txt
@@ -0,0 +1,20 @@
+--- CMakeLists.txt.orig 2022-11-09 12:37:21 UTC
++++ CMakeLists.txt
+@@ -65,13 +65,10 @@ ENDIF ()
+ ENDIF ()
+ ENDIF ()
+
+-IF (CMAKE_REQUIRE_FAILE)
+- SET (CMAKE_REQUIRE_FIND_PACKAGE_Eigen3 ON)
+- SET (CMAKE_REQUIRE_FIND_PACKAGE_nlohmann_json ON)
+- SET (CMAKE_REQUIRE_FIND_PACKAGE_pybind11 ON)
+- SET (CMAKE_REQUIRE_FIND_PACKAGE_pybind11_json ON)
+- SET (CMAKE_REQUIRE_FIND_PACKAGE_GTest ON)
+-ENDIF ()
++SET (CMAKE_REQUIRE_FIND_PACKAGE_Eigen3 ON)
++SET (CMAKE_REQUIRE_FIND_PACKAGE_nlohmann_json ON)
++SET (CMAKE_REQUIRE_FIND_PACKAGE_pybind11 ON)
++SET (CMAKE_REQUIRE_FIND_PACKAGE_pybind11_json ON)
+
+ # detect operating system and host processor
+ MESSAGE (STATUS "We are on a ${CMAKE_SYSTEM_NAME} system")
diff --git a/math/py-jij-cimod/files/patch-pyproject.toml b/math/py-jij-cimod/files/patch-pyproject.toml
new file mode 100644
index 000000000000..3bc3e040dfe8
--- /dev/null
+++ b/math/py-jij-cimod/files/patch-pyproject.toml
@@ -0,0 +1,11 @@
+--- pyproject.toml.orig 2025-10-11 17:30:54 UTC
++++ pyproject.toml
+@@ -17,7 +17,7 @@ requires = [
+ "scikit-build-core>=0.10",
+ "setuptools_scm[toml]",
+ "pybind11",
+- "oldest-supported-numpy",
++ "numpy",
+ ]
+ build-backend = "scikit_build_core.build"
+
diff --git a/math/py-jij-cimod/pkg-descr b/math/py-jij-cimod/pkg-descr
new file mode 100644
index 000000000000..b9c6e268c2b4
--- /dev/null
+++ b/math/py-jij-cimod/pkg-descr
@@ -0,0 +1,7 @@
+jij-cimod provides Python bindings for cimod, a C++ library
+that provides functionalities for handling binary quadratic
+models (BQM) and polynomial quadratic models (PQM).
+
+It allows Python developers to leverage its high-performance
+C++ core for mathematical optimization problems, particularly
+in fields like quantum annealing and combinatorial optimization.
diff --git a/math/py-narwhals/Makefile b/math/py-narwhals/Makefile
index ee46905cd795..e246fe3ac09a 100644
--- a/math/py-narwhals/Makefile
+++ b/math/py-narwhals/Makefile
@@ -1,5 +1,5 @@
PORTNAME= narwhals
-PORTVERSION= 2.5.0
+PORTVERSION= 2.6.0
CATEGORIES= math python
MASTER_SITES= PYPI \
https://github.com/narwhals-dev/narwhals/releases/download/v${PORTVERSION}/
diff --git a/math/py-narwhals/distinfo b/math/py-narwhals/distinfo
index 3317885273cb..7e2bbf0d990b 100644
--- a/math/py-narwhals/distinfo
+++ b/math/py-narwhals/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1759324170
-SHA256 (narwhals-2.5.0.tar.gz) = 8ae0b6f39597f14c0dc52afc98949d6f8be89b5af402d2d98101d2f7d3561418
-SIZE (narwhals-2.5.0.tar.gz) = 558573
+TIMESTAMP = 1759816700
+SHA256 (narwhals-2.6.0.tar.gz) = 5c9e2ba923e6a0051017e146184e49fb793548936f978ce130c9f55a9a81240e
+SIZE (narwhals-2.6.0.tar.gz) = 561649
diff --git a/math/py-numexpr/Makefile b/math/py-numexpr/Makefile
index 8f796c3465c6..2945bb94ef18 100644
--- a/math/py-numexpr/Makefile
+++ b/math/py-numexpr/Makefile
@@ -1,5 +1,5 @@
PORTNAME= numexpr
-PORTVERSION= 2.12.1
+PORTVERSION= 2.13.0
CATEGORIES= math python
MASTER_SITES= PYPI \
https://github.com/pydata/numexpr/releases/download/v${PORTVERSION}/
diff --git a/math/py-numexpr/distinfo b/math/py-numexpr/distinfo
index 6a35de507d24..40f4d7c8f961 100644
--- a/math/py-numexpr/distinfo
+++ b/math/py-numexpr/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1759324172
-SHA256 (numexpr-2.12.1.tar.gz) = e239faed0af001d1f1ea02934f7b3bb2bb6711ddb98e7a7bef61be5f45ff54ab
-SIZE (numexpr-2.12.1.tar.gz) = 115053
+TIMESTAMP = 1759816702
+SHA256 (numexpr-2.13.0.tar.gz) = 3363d804f202437586447a49b5c83b01322e8be72279d49e0bf524720edc01b6
+SIZE (numexpr-2.13.0.tar.gz) = 118688
diff --git a/math/py-numpy/Makefile b/math/py-numpy/Makefile
index 0c9257ff3e9c..22f8b33f9ed3 100644
--- a/math/py-numpy/Makefile
+++ b/math/py-numpy/Makefile
@@ -1,6 +1,6 @@
PORTNAME= numpy
PORTVERSION= 1.26.4
-PORTREVISION= 7
+PORTREVISION= 9
PORTEPOCH= 1
CATEGORIES= math python
MASTER_SITES= PYPI \
diff --git a/math/py-scs/Makefile b/math/py-scs/Makefile
index 87d60dd90608..e1fc8c128ec0 100644
--- a/math/py-scs/Makefile
+++ b/math/py-scs/Makefile
@@ -1,6 +1,5 @@
PORTNAME= scs
-DISTVERSION= 3.2.7
-PORTREVISION= 1
+DISTVERSION= 3.2.9
CATEGORIES= math python
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -26,6 +25,8 @@ MAKE_ENV= ${CONFIGURE_ENV}
TEST_ENV= ${MAKE_ENV} PYTHONPATH=${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}
post-install:
- @${STRIP_CMD} ${STAGEDIR}${PYTHON_SITELIBDIR}/_scs_*.so
+ @${STRIP_CMD} \
+ ${STAGEDIR}${PYTHON_SITELIBDIR}/scs/_scs_direct${PYTHON_TAG}.so \
+ ${STAGEDIR}${PYTHON_SITELIBDIR}/scs/_scs_indirect${PYTHON_TAG}.so
.include <bsd.port.mk>
diff --git a/math/py-scs/distinfo b/math/py-scs/distinfo
index 48effb4dbcba..bcb0f972262b 100644
--- a/math/py-scs/distinfo
+++ b/math/py-scs/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1731044167
-SHA256 (scs-3.2.7.tar.gz) = e89d81752ef241d7e408f21d0b69cde9bb6ce196241482e17f763cba5a7d9497
-SIZE (scs-3.2.7.tar.gz) = 1600253
+TIMESTAMP = 1760338342
+SHA256 (scs-3.2.9.tar.gz) = df9542d435d21938ed09494a6c525a9772779902b61300961e16890a2df7f572
+SIZE (scs-3.2.9.tar.gz) = 1690742
diff --git a/math/py-scs/files/patch-pyproject.toml b/math/py-scs/files/patch-pyproject.toml
index 7b7980d3fad4..d62e3f0d491b 100644
--- a/math/py-scs/files/patch-pyproject.toml
+++ b/math/py-scs/files/patch-pyproject.toml
@@ -1,11 +1,11 @@
---- pyproject.toml.orig 2024-06-20 23:14:01 UTC
+--- pyproject.toml.orig 2025-10-12 18:49:35 UTC
+++ pyproject.toml
@@ -1,7 +1,7 @@ requires = [
[build-system]
build-backend = 'mesonpy'
requires = [
-- "numpy >= 2.0.0; python_version > '3.8'",
-+ "numpy; python_version > '3.8'",
- "oldest-supported-numpy; python_version <= '3.8'",
+- "numpy >= 2.0.0",
++ "numpy",
"meson-python"
]
+
diff --git a/math/rkward/Makefile b/math/rkward/Makefile
index c6c85fc150cc..66c4ffc103a2 100644
--- a/math/rkward/Makefile
+++ b/math/rkward/Makefile
@@ -1,6 +1,5 @@
PORTNAME= rkward
-PORTVERSION= 0.8.1
-PORTREVISION= 1
+PORTVERSION= 0.8.2
CATEGORIES= math
MASTER_SITES= KDE/stable/${PORTNAME}/${PORTVERSION}/
@@ -24,8 +23,8 @@ TEST_DEPENDS= ${LR_MOD_DIR}/FAdist/INDEX:science/R-cran-FAdist \
USES= cmake compiler:c++11-lang desktop-file-utils gettext gl fortran \
kde:6 localbase php:cli qt:6 shared-mime-info xorg
USE_GL= opengl
-USE_QT= 5compat base declarative positioning webchannel webengine
-USE_XORG= ice x11 xext
+USE_QT= base declarative positioning webchannel webengine
+USE_XORG= ice x11 xcb xext
USE_KDE= archive bookmarks breeze-icons colorscheme completion config \
configwidgets coreaddons crash ecm doctools guiaddons i18n \
itemviews jobwidgets kio notifications parts service solid \
@@ -59,8 +58,8 @@ RUN_DEPENDS+= ${LR_MOD_DIR}/XML/INDEX:textproc/R-cran-XML \
${LR_MOD_DIR}/pwr/INDEX:math/R-cran-pwr \
${LR_MOD_DIR}/hdrcde/INDEX:math/R-cran-hdrcde \
${LR_MOD_DIR}/devtools/INDEX:devel/R-cran-devtools \
+ ${LR_MOD_DIR}/XLConnect/INDEX:math/R-cran-XLConnect \
${LR_MOD_DIR}/exactRankTests/INDEX:math/R-cran-exactRankTests
-#RUN_DEPENDS+= ${LR_MOD_DIR}/XLConnect/INDEX:math/R-cran-XLConnect
.endif
.if ${PORT_OPTIONS:MINSTTEST}
diff --git a/math/rkward/distinfo b/math/rkward/distinfo
index 5c083031ad76..cec7f79ffbc2 100644
--- a/math/rkward/distinfo
+++ b/math/rkward/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1746364756
-SHA256 (rkward-0.8.1.tar.gz) = 44630c63d84f4ca7c040ab3c2dfcc938dfe8ad380900698b4c3803669b93b977
-SIZE (rkward-0.8.1.tar.gz) = 9054303
+TIMESTAMP = 1760039410
+SHA256 (rkward-0.8.2.tar.gz) = be8abdfcd7a17aa5196f63e0136fdbc693e93d9f2f0ec66f2bdacacfc22b9ca8
+SIZE (rkward-0.8.2.tar.gz) = 7109936
diff --git a/math/rkward/files/patch-rkward_windows_rktoolwindowbar.cpp b/math/rkward/files/patch-rkward_windows_rktoolwindowbar.cpp
index db084ca87992..5501707b9078 100644
--- a/math/rkward/files/patch-rkward_windows_rktoolwindowbar.cpp
+++ b/math/rkward/files/patch-rkward_windows_rktoolwindowbar.cpp
@@ -1,10 +1,10 @@
---- rkward/windows/rktoolwindowbar.cpp.orig 2022-04-05 11:57:55 UTC
+--- rkward/windows/rktoolwindowbar.cpp.orig 2025-10-01 11:59:03 UTC
+++ rkward/windows/rktoolwindowbar.cpp
@@ -15,6 +15,7 @@ SPDX-License-Identifier: GPL-2.0-or-later
#include <kselectaction.h>
#include <kwidgetsaddons_version.h>
+#include <QLayout>
- #include <QSplitter>
#include <QContextMenuEvent>
#include <QHBoxLayout>
+ #include <QSplitter>
diff --git a/math/rkward/pkg-plist b/math/rkward/pkg-plist
index ce0c941c66f2..a524ffcc2e05 100644
--- a/math/rkward/pkg-plist
+++ b/math/rkward/pkg-plist
@@ -63,16 +63,6 @@ share/ktexteditor_snippets/data/RKWardRMd.xml
share/ktexteditor_snippets/data/RKWardpapaja.xml
share/ktexteditor_snippets/data/RKWardroxygen2.xml
share/ktexteditor_snippets/data/RKWardutils.xml
-%%NLS%%share/locale/bs/LC_MESSAGES/rkward.mo
-%%NLS%%share/locale/bs/LC_MESSAGES/rkward__analysis.mo
-%%NLS%%share/locale/bs/LC_MESSAGES/rkward__data.mo
-%%NLS%%share/locale/bs/LC_MESSAGES/rkward__distributions.mo
-%%NLS%%share/locale/bs/LC_MESSAGES/rkward__embedded.mo
-%%NLS%%share/locale/bs/LC_MESSAGES/rkward__graphics_device.mo
-%%NLS%%share/locale/bs/LC_MESSAGES/rkward__import_export.mo
-%%NLS%%share/locale/bs/LC_MESSAGES/rkward__item_response_theory.mo
-%%NLS%%share/locale/bs/LC_MESSAGES/rkward__pages.mo
-%%NLS%%share/locale/bs/LC_MESSAGES/rkward__plots.mo
%%NLS%%share/locale/ca/LC_MESSAGES/rkward.mo
%%NLS%%share/locale/ca/LC_MESSAGES/rkward__analysis.mo
%%NLS%%share/locale/ca/LC_MESSAGES/rkward__data.mo
@@ -93,28 +83,8 @@ share/ktexteditor_snippets/data/RKWardutils.xml
%%NLS%%share/locale/ca@valencia/LC_MESSAGES/rkward__item_response_theory.mo
%%NLS%%share/locale/ca@valencia/LC_MESSAGES/rkward__pages.mo
%%NLS%%share/locale/ca@valencia/LC_MESSAGES/rkward__plots.mo
-%%NLS%%share/locale/cs/LC_MESSAGES/rkward.mo
-%%NLS%%share/locale/cs/LC_MESSAGES/rkward__analysis.mo
-%%NLS%%share/locale/cs/LC_MESSAGES/rkward__data.mo
-%%NLS%%share/locale/cs/LC_MESSAGES/rkward__distributions.mo
-%%NLS%%share/locale/cs/LC_MESSAGES/rkward__embedded.mo
-%%NLS%%share/locale/cs/LC_MESSAGES/rkward__graphics_device.mo
-%%NLS%%share/locale/cs/LC_MESSAGES/rkward__import_export.mo
-%%NLS%%share/locale/cs/LC_MESSAGES/rkward__item_response_theory.mo
-%%NLS%%share/locale/cs/LC_MESSAGES/rkward__pages.mo
-%%NLS%%share/locale/cs/LC_MESSAGES/rkward__plots.mo
-%%NLS%%share/locale/da/LC_MESSAGES/rkward.mo
%%NLS%%share/locale/de/LC_MESSAGES/rkward.mo
-%%NLS%%share/locale/de/LC_MESSAGES/rkward__analysis.mo
-%%NLS%%share/locale/de/LC_MESSAGES/rkward__data.mo
-%%NLS%%share/locale/de/LC_MESSAGES/rkward__distributions.mo
-%%NLS%%share/locale/de/LC_MESSAGES/rkward__embedded.mo
%%NLS%%share/locale/de/LC_MESSAGES/rkward__graphics_device.mo
-%%NLS%%share/locale/de/LC_MESSAGES/rkward__import_export.mo
-%%NLS%%share/locale/de/LC_MESSAGES/rkward__item_response_theory.mo
-%%NLS%%share/locale/de/LC_MESSAGES/rkward__pages.mo
-%%NLS%%share/locale/de/LC_MESSAGES/rkward__plots.mo
-%%NLS%%share/locale/el/LC_MESSAGES/rkward.mo
%%NLS%%share/locale/en_GB/LC_MESSAGES/rkward.mo
%%NLS%%share/locale/en_GB/LC_MESSAGES/rkward__analysis.mo
%%NLS%%share/locale/en_GB/LC_MESSAGES/rkward__data.mo
@@ -146,29 +116,17 @@ share/ktexteditor_snippets/data/RKWardutils.xml
%%NLS%%share/locale/es/LC_MESSAGES/rkward__pages.mo
%%NLS%%share/locale/es/LC_MESSAGES/rkward__plots.mo
%%NLS%%share/locale/et/LC_MESSAGES/rkward.mo
-%%NLS%%share/locale/et/LC_MESSAGES/rkward__analysis.mo
%%NLS%%share/locale/et/LC_MESSAGES/rkward__data.mo
%%NLS%%share/locale/et/LC_MESSAGES/rkward__distributions.mo
%%NLS%%share/locale/et/LC_MESSAGES/rkward__embedded.mo
%%NLS%%share/locale/et/LC_MESSAGES/rkward__graphics_device.mo
%%NLS%%share/locale/et/LC_MESSAGES/rkward__import_export.mo
%%NLS%%share/locale/et/LC_MESSAGES/rkward__item_response_theory.mo
-%%NLS%%share/locale/et/LC_MESSAGES/rkward__pages.mo
%%NLS%%share/locale/et/LC_MESSAGES/rkward__plots.mo
-%%NLS%%share/locale/eu/LC_MESSAGES/rkward.mo
%%NLS%%share/locale/eu/LC_MESSAGES/rkward__data.mo
%%NLS%%share/locale/eu/LC_MESSAGES/rkward__graphics_device.mo
-%%NLS%%share/locale/eu/LC_MESSAGES/rkward__import_export.mo
%%NLS%%share/locale/fi/LC_MESSAGES/rkward.mo
-%%NLS%%share/locale/fi/LC_MESSAGES/rkward__analysis.mo
-%%NLS%%share/locale/fi/LC_MESSAGES/rkward__data.mo
-%%NLS%%share/locale/fi/LC_MESSAGES/rkward__distributions.mo
-%%NLS%%share/locale/fi/LC_MESSAGES/rkward__embedded.mo
%%NLS%%share/locale/fi/LC_MESSAGES/rkward__graphics_device.mo
-%%NLS%%share/locale/fi/LC_MESSAGES/rkward__import_export.mo
-%%NLS%%share/locale/fi/LC_MESSAGES/rkward__item_response_theory.mo
-%%NLS%%share/locale/fi/LC_MESSAGES/rkward__pages.mo
-%%NLS%%share/locale/fi/LC_MESSAGES/rkward__plots.mo
%%NLS%%share/locale/fr/LC_MESSAGES/rkward.mo
%%NLS%%share/locale/fr/LC_MESSAGES/rkward__analysis.mo
%%NLS%%share/locale/fr/LC_MESSAGES/rkward__data.mo
@@ -190,17 +148,6 @@ share/ktexteditor_snippets/data/RKWardutils.xml
%%NLS%%share/locale/gl/LC_MESSAGES/rkward__pages.mo
%%NLS%%share/locale/gl/LC_MESSAGES/rkward__plots.mo
%%NLS%%share/locale/he/LC_MESSAGES/rkward__graphics_device.mo
-%%NLS%%share/locale/hu/LC_MESSAGES/rkward__analysis.mo
-%%NLS%%share/locale/ia/LC_MESSAGES/rkward.mo
-%%NLS%%share/locale/ia/LC_MESSAGES/rkward__analysis.mo
-%%NLS%%share/locale/ia/LC_MESSAGES/rkward__data.mo
-%%NLS%%share/locale/ia/LC_MESSAGES/rkward__distributions.mo
-%%NLS%%share/locale/ia/LC_MESSAGES/rkward__embedded.mo
-%%NLS%%share/locale/ia/LC_MESSAGES/rkward__graphics_device.mo
-%%NLS%%share/locale/ia/LC_MESSAGES/rkward__import_export.mo
-%%NLS%%share/locale/ia/LC_MESSAGES/rkward__item_response_theory.mo
-%%NLS%%share/locale/ia/LC_MESSAGES/rkward__pages.mo
-%%NLS%%share/locale/ia/LC_MESSAGES/rkward__plots.mo
%%NLS%%share/locale/it/LC_MESSAGES/rkward.mo
%%NLS%%share/locale/it/LC_MESSAGES/rkward__analysis.mo
%%NLS%%share/locale/it/LC_MESSAGES/rkward__data.mo
@@ -211,16 +158,6 @@ share/ktexteditor_snippets/data/RKWardutils.xml
%%NLS%%share/locale/it/LC_MESSAGES/rkward__item_response_theory.mo
%%NLS%%share/locale/it/LC_MESSAGES/rkward__pages.mo
%%NLS%%share/locale/it/LC_MESSAGES/rkward__plots.mo
-%%NLS%%share/locale/ja/LC_MESSAGES/rkward.mo
-%%NLS%%share/locale/ja/LC_MESSAGES/rkward__analysis.mo
-%%NLS%%share/locale/ja/LC_MESSAGES/rkward__data.mo
-%%NLS%%share/locale/ja/LC_MESSAGES/rkward__distributions.mo
-%%NLS%%share/locale/ja/LC_MESSAGES/rkward__embedded.mo
-%%NLS%%share/locale/ja/LC_MESSAGES/rkward__graphics_device.mo
-%%NLS%%share/locale/ja/LC_MESSAGES/rkward__import_export.mo
-%%NLS%%share/locale/ja/LC_MESSAGES/rkward__item_response_theory.mo
-%%NLS%%share/locale/ja/LC_MESSAGES/rkward__pages.mo
-%%NLS%%share/locale/ja/LC_MESSAGES/rkward__plots.mo
%%NLS%%share/locale/ka/LC_MESSAGES/rkward.mo
%%NLS%%share/locale/ka/LC_MESSAGES/rkward__analysis.mo
%%NLS%%share/locale/ka/LC_MESSAGES/rkward__data.mo
@@ -229,18 +166,7 @@ share/ktexteditor_snippets/data/RKWardutils.xml
%%NLS%%share/locale/ka/LC_MESSAGES/rkward__graphics_device.mo
%%NLS%%share/locale/ka/LC_MESSAGES/rkward__import_export.mo
%%NLS%%share/locale/ka/LC_MESSAGES/rkward__item_response_theory.mo
-%%NLS%%share/locale/ka/LC_MESSAGES/rkward__pages.mo
%%NLS%%share/locale/ka/LC_MESSAGES/rkward__plots.mo
-%%NLS%%share/locale/lt/LC_MESSAGES/rkward.mo
-%%NLS%%share/locale/lt/LC_MESSAGES/rkward__analysis.mo
-%%NLS%%share/locale/lt/LC_MESSAGES/rkward__data.mo
-%%NLS%%share/locale/lt/LC_MESSAGES/rkward__distributions.mo
-%%NLS%%share/locale/lt/LC_MESSAGES/rkward__embedded.mo
-%%NLS%%share/locale/lt/LC_MESSAGES/rkward__graphics_device.mo
-%%NLS%%share/locale/lt/LC_MESSAGES/rkward__import_export.mo
-%%NLS%%share/locale/lt/LC_MESSAGES/rkward__item_response_theory.mo
-%%NLS%%share/locale/lt/LC_MESSAGES/rkward__pages.mo
-%%NLS%%share/locale/lt/LC_MESSAGES/rkward__plots.mo
%%NLS%%share/locale/nl/LC_MESSAGES/rkward.mo
%%NLS%%share/locale/nl/LC_MESSAGES/rkward__analysis.mo
%%NLS%%share/locale/nl/LC_MESSAGES/rkward__data.mo
@@ -291,16 +217,6 @@ share/ktexteditor_snippets/data/RKWardutils.xml
%%NLS%%share/locale/ru/LC_MESSAGES/rkward__item_response_theory.mo
%%NLS%%share/locale/ru/LC_MESSAGES/rkward__pages.mo
%%NLS%%share/locale/ru/LC_MESSAGES/rkward__plots.mo
-%%NLS%%share/locale/sk/LC_MESSAGES/rkward.mo
-%%NLS%%share/locale/sk/LC_MESSAGES/rkward__analysis.mo
-%%NLS%%share/locale/sk/LC_MESSAGES/rkward__data.mo
-%%NLS%%share/locale/sk/LC_MESSAGES/rkward__distributions.mo
-%%NLS%%share/locale/sk/LC_MESSAGES/rkward__embedded.mo
-%%NLS%%share/locale/sk/LC_MESSAGES/rkward__graphics_device.mo
-%%NLS%%share/locale/sk/LC_MESSAGES/rkward__import_export.mo
-%%NLS%%share/locale/sk/LC_MESSAGES/rkward__item_response_theory.mo
-%%NLS%%share/locale/sk/LC_MESSAGES/rkward__pages.mo
-%%NLS%%share/locale/sk/LC_MESSAGES/rkward__plots.mo
%%NLS%%share/locale/sl/LC_MESSAGES/rkward.mo
%%NLS%%share/locale/sl/LC_MESSAGES/rkward__analysis.mo
%%NLS%%share/locale/sl/LC_MESSAGES/rkward__data.mo
@@ -341,26 +257,7 @@ share/ktexteditor_snippets/data/RKWardutils.xml
%%NLS%%share/locale/uk/LC_MESSAGES/rkward__item_response_theory.mo
%%NLS%%share/locale/uk/LC_MESSAGES/rkward__pages.mo
%%NLS%%share/locale/uk/LC_MESSAGES/rkward__plots.mo
-%%NLS%%share/locale/zh_CN/LC_MESSAGES/rkward.mo
-%%NLS%%share/locale/zh_CN/LC_MESSAGES/rkward__analysis.mo
-%%NLS%%share/locale/zh_CN/LC_MESSAGES/rkward__data.mo
-%%NLS%%share/locale/zh_CN/LC_MESSAGES/rkward__distributions.mo
-%%NLS%%share/locale/zh_CN/LC_MESSAGES/rkward__embedded.mo
-%%NLS%%share/locale/zh_CN/LC_MESSAGES/rkward__graphics_device.mo
-%%NLS%%share/locale/zh_CN/LC_MESSAGES/rkward__import_export.mo
-%%NLS%%share/locale/zh_CN/LC_MESSAGES/rkward__item_response_theory.mo
-%%NLS%%share/locale/zh_CN/LC_MESSAGES/rkward__pages.mo
-%%NLS%%share/locale/zh_CN/LC_MESSAGES/rkward__plots.mo
-%%NLS%%share/locale/zh_TW/LC_MESSAGES/rkward.mo
-%%NLS%%share/locale/zh_TW/LC_MESSAGES/rkward__analysis.mo
-%%NLS%%share/locale/zh_TW/LC_MESSAGES/rkward__data.mo
-%%NLS%%share/locale/zh_TW/LC_MESSAGES/rkward__distributions.mo
-%%NLS%%share/locale/zh_TW/LC_MESSAGES/rkward__embedded.mo
%%NLS%%share/locale/zh_TW/LC_MESSAGES/rkward__graphics_device.mo
-%%NLS%%share/locale/zh_TW/LC_MESSAGES/rkward__import_export.mo
-%%NLS%%share/locale/zh_TW/LC_MESSAGES/rkward__item_response_theory.mo
-%%NLS%%share/locale/zh_TW/LC_MESSAGES/rkward__pages.mo
-%%NLS%%share/locale/zh_TW/LC_MESSAGES/rkward__plots.mo
share/man/ca/man1/rkward.1.gz
share/man/de/man1/rkward.1.gz
share/man/it/man1/rkward.1.gz
@@ -771,6 +668,7 @@ share/mime/packages/vnd.rkward.r.xml
%%DATADIR%%/irt.pluginmap
%%DATADIR%%/menu.pluginmap
%%DATADIR%%/pages/rkward_addons.rkh
+%%DATADIR%%/pages/rkward_code_navigation.rkh
%%DATADIR%%/pages/rkward_console.rkh
%%DATADIR%%/pages/rkward_for_new_users.rkh
%%DATADIR%%/pages/rkward_for_r_users.rkh
diff --git a/math/scs/Makefile b/math/scs/Makefile
index c2f4c37ecdde..de83a5f6f588 100644
--- a/math/scs/Makefile
+++ b/math/scs/Makefile
@@ -1,6 +1,5 @@
PORTNAME= scs
-DISTVERSION= 3.2.7
-PORTREVISION= 1
+DISTVERSION= 3.2.9
CATEGORIES= math
MAINTAINER= yuri@FreeBSD.org
diff --git a/math/scs/distinfo b/math/scs/distinfo
index fcabe78f8b4e..c8b95aa28b52 100644
--- a/math/scs/distinfo
+++ b/math/scs/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1724601953
-SHA256 (cvxgrp-scs-3.2.7_GH0.tar.gz) = bc8211cfd213f3117676ceb7842f4ed8a3bc7ed9625c4238cc7d83f666e22cc9
-SIZE (cvxgrp-scs-3.2.7_GH0.tar.gz) = 1235001
+TIMESTAMP = 1760338156
+SHA256 (cvxgrp-scs-3.2.9_GH0.tar.gz) = f3d9095fb01fd634d12ccbe6f79ed2acbb7101ad57b723157d44a49cbe187669
+SIZE (cvxgrp-scs-3.2.9_GH0.tar.gz) = 1274849
diff --git a/math/scs/pkg-plist b/math/scs/pkg-plist
index 30015425e42e..ef26c0f0a2f2 100644
--- a/math/scs/pkg-plist
+++ b/math/scs/pkg-plist
@@ -11,6 +11,7 @@ include/scs/scs_blas.h
include/scs/scs_types.h
include/scs/scs_work.h
include/scs/util.h
+include/scs/util_spectral_cones.h
lib/libscsdir.a
lib/libscsdir.so
lib/libscsindir.a