14 files changed, 46 insertions, 41 deletions
diff --git a/math/R-cran-Rmpfr/Makefile b/math/R-cran-Rmpfr/Makefile
index 62c6eca7fcbb..c309b1ac5faa 100644
--- a/math/R-cran-Rmpfr/Makefile
+++ b/math/R-cran-Rmpfr/Makefile
@@ -1,5 +1,5 @@
 PORTNAME=	Rmpfr
-DISTVERSION=	1.0-0
+DISTVERSION=	1.1-0
 CATEGORIES=	math
 DISTNAME=	${PORTNAME}_${DISTVERSION}
 
diff --git a/math/R-cran-Rmpfr/distinfo b/math/R-cran-Rmpfr/distinfo
index 38faae8516f6..9dcf4ed25f35 100644
--- a/math/R-cran-Rmpfr/distinfo
+++ b/math/R-cran-Rmpfr/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1732351079
-SHA256 (Rmpfr_1.0-0.tar.gz) = 9f82423a802855903939244a40f5616519a685a505900efdf36837505e077a50
-SIZE (Rmpfr_1.0-0.tar.gz) = 615875
+TIMESTAMP = 1747455080
+SHA256 (Rmpfr_1.1-0.tar.gz) = ae3e148dc7f003960a81fd4f2b8285c8f8b951be3f34fc2779dfca20b1af141f
+SIZE (Rmpfr_1.1-0.tar.gz) = 618436
diff --git a/math/R-cran-doBy/Makefile b/math/R-cran-doBy/Makefile
index cb2311b8b087..0803642e83ef 100644
--- a/math/R-cran-doBy/Makefile
+++ b/math/R-cran-doBy/Makefile
@@ -1,5 +1,5 @@
 PORTNAME=	doBy
-DISTVERSION=	4.6.26
+DISTVERSION=	4.6.27
 CATEGORIES=	math
 DISTNAME=	${PORTNAME}_${DISTVERSION}
 
diff --git a/math/R-cran-doBy/distinfo b/math/R-cran-doBy/distinfo
index 244a9cc479ec..fd5af79a5ffb 100644
--- a/math/R-cran-doBy/distinfo
+++ b/math/R-cran-doBy/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1745103709
-SHA256 (doBy_4.6.26.tar.gz) = e574dc958c6bf6924b9efa8d61f24dad68486833805ff588e284c1eddb78fa36
-SIZE (doBy_4.6.26.tar.gz) = 4580190
+TIMESTAMP = 1747473203
+SHA256 (doBy_4.6.27.tar.gz) = e175e80da373ddc31b7f38102e3f6690cccea39394b5816688c99ed60e4860bd
+SIZE (doBy_4.6.27.tar.gz) = 4583797
diff --git a/math/armadillo/Makefile b/math/armadillo/Makefile
index b8aaedb93965..be5d5362ea91 100644
--- a/math/armadillo/Makefile
+++ b/math/armadillo/Makefile
@@ -1,5 +1,5 @@
 PORTNAME=	armadillo
-PORTVERSION=	14.4.1
+PORTVERSION=	14.4.2
 CATEGORIES=	math
 MASTER_SITES=	SF/arma
 
diff --git a/math/armadillo/distinfo b/math/armadillo/distinfo
index 99a5bdfa5b52..ca513bef276d 100644
--- a/math/armadillo/distinfo
+++ b/math/armadillo/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1744288726
-SHA256 (armadillo-14.4.1.tar.xz) = 26ce272bfdc8246c278e6f8cfa53777a1efb14ef196e88082fee05da1a463491
-SIZE (armadillo-14.4.1.tar.xz) = 7483740
+TIMESTAMP = 1745936036
+SHA256 (armadillo-14.4.2.tar.xz) = 6dfddcfbd91e70679d7c11e94a5963a7efda002fec351e6f4875ac8e245c5117
+SIZE (armadillo-14.4.2.tar.xz) = 6870412
diff --git a/math/intx/Makefile b/math/intx/Makefile
index 188dc53c8408..85201668f5f9 100644
--- a/math/intx/Makefile
+++ b/math/intx/Makefile
@@ -1,6 +1,6 @@
 PORTNAME=	intx
 DISTVERSIONPREFIX=	v
-DISTVERSION=	0.12.1
+DISTVERSION=	0.13.0
 CATEGORIES=	math
 
 MAINTAINER=	eduardo@FreeBSD.org
diff --git a/math/intx/distinfo b/math/intx/distinfo
index b5dbca355fcb..ccf72d3ada61 100644
--- a/math/intx/distinfo
+++ b/math/intx/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1728545011
-SHA256 (chfast-intx-v0.12.1_GH0.tar.gz) = 279a9aa1e46e60f72eb0eb4ea92fec786e02b35069942ed161be7dcfb6700dd8
-SIZE (chfast-intx-v0.12.1_GH0.tar.gz) = 57809
+TIMESTAMP = 1747423212
+SHA256 (chfast-intx-v0.13.0_GH0.tar.gz) = 849577814e6feb9d4fc3f66f99698eee51dc4b7e3e035c1a2cb76e0d9c52c2e5
+SIZE (chfast-intx-v0.13.0_GH0.tar.gz) = 57498
diff --git a/math/lcalc/Makefile b/math/lcalc/Makefile
index c4dc68f3cd21..c2ade72e45b3 100644
--- a/math/lcalc/Makefile
+++ b/math/lcalc/Makefile
@@ -1,37 +1,39 @@
 PORTNAME=	lcalc
-PORTVERSION=	2.1.0
+DISTVERSION=	2.1.0
+PORTREVISION=	1
 CATEGORIES=	math
-MASTER_SITES=	ftp://ftp.fu-berlin.de/unix/misc/sage/spkg/upstream/lcalc/
+MASTER_SITES=	https://mirror.csclub.uwaterloo.ca/sage/spkg/upstream/${PORTNAME}/ \
+		https://mirror.lyrahosting.com/sagemath/spkg/upstream/${PORTNAME}/ \
+		https://mirror.dogado.de/sage/spkg/upstream/${PORTNAME}/ \
+		http://files.sagemath.org/spkg/upstream/${PORTNAME}/
 
 MAINTAINER=	thierry@FreeBSD.org
 COMMENT=	L-function c++ class library and the CLI program lcalc
 WWW=		https://gitlab.com/sagemath/lcalc
 
 LICENSE=	GPLv2+
+LICENSE_FILE=	${WRKSRC}/doc/COPYING
 
 BUILD_DEPENDS=	gengetopt:devel/gengetopt
-LIB_DEPENDS=	libgmp.so:math/gmp	\
-		libmpfr.so:math/mpfr	\
-		libpari.so:math/pari
+LIB_DEPENDS=	libpari.so:math/pari
 
-#USE_GITLAB=	yes
-#GL_ACCOUNT=	sagemath
-
-USES=		autoreconf compiler:c++11-lang gmake libtool localbase	\
-		pkgconfig tar:xz
+USES=		compiler:c++11-lang gmake libtool localbase pkgconfig tar:xz
+USE_LDCONFIG=	yes
 
 GNU_CONFIGURE=	yes
-CONFIGURE_ARGS=	--with-pari
+
 INSTALL_TARGET=	install-strip
 TEST_TARGET=	check
-USE_LDCONFIG=	yes
+
+CONFIGURE_ARGS=	--with-pari \
+		--with-pkgconfigdir=${PREFIX}/libdata/pkgconfig
 
 OPTIONS_DEFINE=	DOCS EXAMPLES
 
-pre-configure:
-.for dir in . data
-	${REINPLACE_CMD} -e 's|@docdir@/examples|${EXAMPLESDIR}|'	\
-		${WRKSRC}/doc/examples/${dir}/Makefile.am
-.endfor
+post-configure:
+	${REINPLACE_CMD} -e 's|$$(DESTDIR)$$(docdir)|${STAGEDIR}${EXAMPLESDIR}|g' \
+	    ${PATCH_WRKSRC}/doc/examples/Makefile
+	${REINPLACE_CMD} -e 's|$$(DESTDIR)$$(docdir)|${STAGEDIR}${EXAMPLESDIR}/data|g' \
+	    ${PATCH_WRKSRC}/doc/examples/*/Makefile
 
 .include <bsd.port.mk>
diff --git a/math/libsharp2/Makefile b/math/libsharp2/Makefile
index cd0d2a2a3644..0b72adecf3ce 100644
--- a/math/libsharp2/Makefile
+++ b/math/libsharp2/Makefile
@@ -9,6 +9,9 @@ WWW=		https://gitlab.mpcdf.mpg.de/mtr/libsharp
 LICENSE=	GPLv2
 LICENSE_FILE=	${WRKSRC}/COPYING
 
+DEPRECATED=	Deprecated upstream in 2021, upstream recommends migrating to ducc0
+EXPIRATION_DATE=2025-06-30
+
 USES=		autoreconf gmake libtool
 USE_GITLAB=	yes
 
diff --git a/math/py-narwhals/Makefile b/math/py-narwhals/Makefile
index eb8562445a74..1fc8b6ecdac0 100644
--- a/math/py-narwhals/Makefile
+++ b/math/py-narwhals/Makefile
@@ -1,5 +1,5 @@
 PORTNAME=	narwhals
-PORTVERSION=	1.35.0
+PORTVERSION=	1.37.0
 CATEGORIES=	math python
 MASTER_SITES=	PYPI \
 		https://github.com/narwhals-dev/narwhals/releases/download/v${PORTVERSION}/
diff --git a/math/py-narwhals/distinfo b/math/py-narwhals/distinfo
index 0ee2ac9f87f8..71c12ed13fb0 100644
--- a/math/py-narwhals/distinfo
+++ b/math/py-narwhals/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1745178080
-SHA256 (narwhals-1.35.0.tar.gz) = 07477d18487fbc940243b69818a177ed7119b737910a8a254fb67688b48a7c96
-SIZE (narwhals-1.35.0.tar.gz) = 265784
+TIMESTAMP = 1745936202
+SHA256 (narwhals-1.37.0.tar.gz) = 47cb7bb63afd85e72c5260a8c6281fce88b2e12fbe18eba777b980e3dccd5a45
+SIZE (narwhals-1.37.0.tar.gz) = 271458
diff --git a/math/py-scikit-fem/Makefile b/math/py-scikit-fem/Makefile
index 7629e496e2c1..b022425e9c4c 100644
--- a/math/py-scikit-fem/Makefile
+++ b/math/py-scikit-fem/Makefile
@@ -1,5 +1,5 @@
 PORTNAME=	scikit-fem
-PORTVERSION=	10.0.2
+PORTVERSION=	11.0.0
 CATEGORIES=	math python
 MASTER_SITES=	PYPI
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
diff --git a/math/py-scikit-fem/distinfo b/math/py-scikit-fem/distinfo
index 2e16e7e37409..6b7cb90dd5e0 100644
--- a/math/py-scikit-fem/distinfo
+++ b/math/py-scikit-fem/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1727314584
-SHA256 (scikit_fem-10.0.2.tar.gz) = 8448da3776bbd03a9660ef0de85c67e292de009f2226f405523c6e2388f6b0f3
-SIZE (scikit_fem-10.0.2.tar.gz) = 159954
+TIMESTAMP = 1745936204
+SHA256 (scikit_fem-11.0.0.tar.gz) = 8973a2efd5237083999c8f94ae1bd8fbcb63479283e4797521e93c4f284d91db
+SIZE (scikit_fem-11.0.0.tar.gz) = 162611