diff options
Diffstat (limited to 'devel/py-anndata')
| -rw-r--r-- | devel/py-anndata/Makefile | 17 | ||||
| -rw-r--r-- | devel/py-anndata/distinfo | 6 | ||||
| -rw-r--r-- | devel/py-anndata/files/patch-pyproject.toml | 18 |
3 files changed, 30 insertions, 11 deletions
diff --git a/devel/py-anndata/Makefile b/devel/py-anndata/Makefile index 0d9baee1c68c..e4d1a317cec5 100644 --- a/devel/py-anndata/Makefile +++ b/devel/py-anndata/Makefile @@ -1,5 +1,5 @@ PORTNAME= anndata -PORTVERSION= 0.11.4 +PORTVERSION= 0.12.1 CATEGORIES= devel python MASTER_SITES= PYPI PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} @@ -14,16 +14,17 @@ LICENSE_FILE= ${WRKSRC}/LICENSE BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}hatch-vcs>=0:devel/py-hatch-vcs@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}hatchling>=0:devel/py-hatchling@${PY_FLAVOR} -RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}array-api-compat>=1.4:devel/py-array-api-compat@${PY_FLAVOR} \ - ${PY_EXCEPTIONGROUP} \ - ${PYTHON_PKGNAMEPREFIX}h5py>=3.7:science/py-h5py@${PY_FLAVOR} \ +RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}array-api-compat>=1.7.1:devel/py-array-api-compat@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}h5py>=3.8:science/py-h5py@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}legacy-api-wrap>=0:devel/py-legacy-api-wrap@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}natsort>=0:devel/py-natsort@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}numpy>=1.23,1:math/py-numpy@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}numpy>=1.26,1:math/py-numpy@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}packaging>=24.2:devel/py-packaging@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}pandas>=1.4,1:math/py-pandas@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}scipy>=1.8:science/py-scipy@${PY_FLAVOR} + ${PYTHON_PKGNAMEPREFIX}pandas>=2.1.0,1:math/py-pandas@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}scipy>=1.11:science/py-scipy@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}zarr>=2.18.4:devel/py-zarr@${PY_FLAVOR} -USES= python:3.10+ +USES= python:3.11+ USE_PYTHON= autoplist concurrent pep517 NO_ARCH= yes diff --git a/devel/py-anndata/distinfo b/devel/py-anndata/distinfo index 67c8d599e12e..124d882c03a9 100644 --- a/devel/py-anndata/distinfo +++ b/devel/py-anndata/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1744288854 -SHA256 (anndata-0.11.4.tar.gz) = 4ce08d09d2ccb5f37d32790363bbcc7fc1b79863842296ae4badfaf48c736e24 -SIZE (anndata-0.11.4.tar.gz) = 541143 +TIMESTAMP = 1753369374 +SHA256 (anndata-0.12.1.tar.gz) = 9a0767a7c47464ad78457e297d871f7ec483bdafc7cf76cb322168919c375ff1 +SIZE (anndata-0.12.1.tar.gz) = 582722 diff --git a/devel/py-anndata/files/patch-pyproject.toml b/devel/py-anndata/files/patch-pyproject.toml new file mode 100644 index 000000000000..61ec806f6d72 --- /dev/null +++ b/devel/py-anndata/files/patch-pyproject.toml @@ -0,0 +1,18 @@ +--- pyproject.toml.orig 2020-02-02 00:00:00 UTC ++++ pyproject.toml +@@ -39,13 +39,13 @@ dependencies = [ + "pandas >=2.1.0, !=2.1.2", + "numpy>=1.26", + # https://github.com/scverse/anndata/issues/1434 +- "scipy >=1.12", ++ "scipy >=1.11", + "h5py>=3.8", + "natsort", + "packaging>=24.2", + "array_api_compat>=1.7.1", + "legacy-api-wrap", +- "zarr >=2.18.7, !=3.0.*", ++ "zarr >=2.18.4, !=3.0.*", + ] + dynamic = [ "version" ] + |