diff options
Diffstat (limited to 'biology/seqtk/files/patch-Makefile')
| -rw-r--r-- | biology/seqtk/files/patch-Makefile | 37 |
1 files changed, 22 insertions, 15 deletions
diff --git a/biology/seqtk/files/patch-Makefile b/biology/seqtk/files/patch-Makefile index ab373642a46e..d8acf547402e 100644 --- a/biology/seqtk/files/patch-Makefile +++ b/biology/seqtk/files/patch-Makefile @@ -1,34 +1,41 @@ ---- Makefile.orig 2018-06-18 00:15:09 UTC +--- Makefile.orig 2025-06-01 19:24:24 UTC +++ Makefile -@@ -1,14 +1,23 @@ +@@ -1,14 +1,30 @@ -CC=gcc --CFLAGS=-g -Wall -O2 -Wno-unused-function +-CFLAGS=-g -Wall -O2 -Wno-unused-function -Wno-format -BINDIR=/usr/local/bin - --all:seqtk +# Respect user's build environment by using ?= to set defaults for variables +# not set in the env or make arguments. Use += to add essential args. - --seqtk:seqtk.c khash.h kseq.h -- $(CC) $(CFLAGS) seqtk.c -o $@ -lz -lm ++ +CC ?= gcc -+CFLAGS ?= -g -Wall -O2 -Wno-unused-function ++CFLAGS ?= -g -Wall -O2 ++CFLAGS += -Wno-unused-function -Wno-format +LDFLAGS += -lz -lm +PREFIX ?= /usr/local ++STRIP ?= strip ++BINDIR= $(PREFIX)/bin + +-all:seqtk +MKDIR ?= mkdir +INSTALL ?= install -+# DESTDIR is empty by default to install straight to PREFIX --install:all -- install seqtk $(BINDIR) +-seqtk:seqtk.c khash.h kseq.h +- $(CC) $(CFLAGS) seqtk.c -o $@ -lz -lm +all: seqtk +-install:all +- install seqtk $(BINDIR) +seqtk: seqtk.c khash.h kseq.h + $(CC) $(CFLAGS) seqtk.c -o $@ $(LDFLAGS) -+ + ++# Add DESTDIR staged install support ++# DESTDIR is empty by default to install straight to PREFIX +install: all -+ $(MKDIR) -p $(DESTDIR)$(PREFIX)/bin -+ $(INSTALL) -c -m 0755 seqtk $(DESTDIR)$(PREFIX)/bin ++ $(MKDIR) -p $(DESTDIR)$(BINDIR) ++ $(INSTALL) -c -m 0755 seqtk $(DESTDIR)$(BINDIR) ++ ++install-strip: install ++ $(STRIP) $(DESTDIR)$(BINDIR)/seqtk + clean: - rm -fr gmon.out *.o ext/*.o a.out seqtk trimadap *~ *.a *.dSYM session* |