- update png to 1.5.10

60 files changed, 103 insertions, 33 deletions

diff --git a/science/abinit/Makefile b/science/abinit/Makefile
index 644c947da830..08b77e10cb0f 100644
--- a/science/abinit/Makefile
+++ b/science/abinit/Makefile
@@ -7,7 +7,7 @@
 
 PORTNAME=	abinit
 PORTVERSION=	5.7.3
-PORTREVISION=	9
+PORTREVISION=	10
 CATEGORIES=	science
 MASTER_SITES=	ftp://ftp.abinit.org/pub/abinitio/ABINIT_v${PORTVERSION}/
 
diff --git a/science/afni/Makefile b/science/afni/Makefile
index 1d49312999b0..18a6dc8e3f57 100644
--- a/science/afni/Makefile
+++ b/science/afni/Makefile
@@ -16,6 +16,7 @@
 
 PORTNAME=	afni
 PORTVERSION=	2012.04.17.2129
+PORTREVISION=	1
 CATEGORIES=	science biology graphics
 MASTER_SITES=	http://personalpages.tds.net/~jwbacon/Ports/distfiles/AFNI/${PORTVERSION}/ \
 		http://www.acadix.biz/Ports/distfiles/AFNI/${PORTVERSION}/
diff --git a/science/avogadro/Makefile b/science/avogadro/Makefile
index da22617261a3..1272c7d00f5b 100644
--- a/science/avogadro/Makefile
+++ b/science/avogadro/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	avogadro
 PORTVERSION=	1.0.3
+PORTREVISION=	1
 CATEGORIES=	science
 MASTER_SITES=	SF
 
diff --git a/science/brian/Makefile b/science/brian/Makefile
index 9ac83ee3d835..b80b3350a55b 100644
--- a/science/brian/Makefile
+++ b/science/brian/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	brian
 PORTVERSION=	1.3.1
+PORTREVISION=	1
 CATEGORIES=	science python
 MASTER_SITES=	CHEESESHOP \
 		SF/${PORTNAME}/Brian/${PORTVERSION}
diff --git a/science/cdcl/Makefile b/science/cdcl/Makefile
index 4075ff4160a3..41c4e84b5f7e 100644
--- a/science/cdcl/Makefile
+++ b/science/cdcl/Makefile
@@ -7,7 +7,7 @@
 
 PORTNAME=	cdcl
 PORTVERSION=	5.3.3
-PORTREVISION=	6
+PORTREVISION=	7
 CATEGORIES=	science graphics
 MASTER_SITES=	http://www.gfd-dennou.org/arch/dcl/ \
 		http://dennou-h.gfd-dennou.org/arch/dcl/ \
diff --git a/science/chemical-mime-data/Makefile b/science/chemical-mime-data/Makefile
index e17ba9fe9538..dd148d964742 100644
--- a/science/chemical-mime-data/Makefile
+++ b/science/chemical-mime-data/Makefile
@@ -6,7 +6,7 @@
 
 PORTNAME=	chemical-mime-data
 PORTVERSION=	0.1.94
-PORTREVISION=	4
+PORTREVISION=	5
 CATEGORIES=	science
 MASTER_SITES=	SF/chemical-mime/${PORTNAME}/${PORTVERSION}
 
diff --git a/science/chemtool-devel/Makefile b/science/chemtool-devel/Makefile
index 2b28a163aa5d..9c035fc7ab42 100644
--- a/science/chemtool-devel/Makefile
+++ b/science/chemtool-devel/Makefile
@@ -6,7 +6,7 @@
 
 PORTNAME=	chemtool
 PORTVERSION=	1.7.20050716
-PORTREVISION=	6
+PORTREVISION=	7
 CATEGORIES=	science
 MASTER_SITES=	http://ruby.chemie.uni-freiburg.de/~martin/chemtool/
 
diff --git a/science/chemtool/Makefile b/science/chemtool/Makefile
index 958fac5f9962..564616a08bf1 100644
--- a/science/chemtool/Makefile
+++ b/science/chemtool/Makefile
@@ -6,7 +6,7 @@
 
 PORTNAME=	chemtool
 PORTVERSION=	1.6.11
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	science
 MASTER_SITES=	http://ruby.chemie.uni-freiburg.de/~martin/chemtool/
 
diff --git a/science/dcl/Makefile b/science/dcl/Makefile
index 93a2f7aa4af5..daa476886d10 100644
--- a/science/dcl/Makefile
+++ b/science/dcl/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	dcl
 PORTVERSION=	5.4.4
+PORTREVISION=	1
 CATEGORIES=	science graphics
 MASTER_SITES=	http://www.gfd-dennou.org/library/dcl/ \
 		http://dennou-h.gfd-dennou.org/library/dcl/ \
diff --git a/science/ecs/Makefile b/science/ecs/Makefile
index b92d6396c852..d1177ffcdfa7 100644
--- a/science/ecs/Makefile
+++ b/science/ecs/Makefile
@@ -7,7 +7,7 @@
 
 PORTNAME=	ecs
 PORTVERSION=	1.3.3
-PORTREVISION=	6
+PORTREVISION=	7
 CATEGORIES=	science
 MASTER_SITES=	http://rd.edf.com/fichiers/fckeditor/File/EDF%20RD/Code_Saturne/Fichiers/
 DISTNAME=	${PORTNAME}-${PORTVERSION:S/.//g}
diff --git a/science/euler/Makefile b/science/euler/Makefile
index 41eca08d63ef..de7645f4ed67 100644
--- a/science/euler/Makefile
+++ b/science/euler/Makefile
@@ -8,7 +8,7 @@
 
 PORTNAME=	euler
 PORTVERSION=	1.61.0
-PORTREVISION=	5
+PORTREVISION=	6
 CATEGORIES=	science
 MASTER_SITES=	SF/${PORTNAME}/${PORTNAME}/${PORTNAME}-1.61
 EXTRACT_SUFX=	.tgz
diff --git a/science/flounder/Makefile b/science/flounder/Makefile
index 6b71f83ef247..f58af0051bbf 100644
--- a/science/flounder/Makefile
+++ b/science/flounder/Makefile
@@ -8,7 +8,7 @@
 
 PORTNAME=	flounder
 PORTVERSION=	0.40
-PORTREVISION=	11
+PORTREVISION=	12
 CATEGORIES=	science
 MASTER_SITES=	http://www.enel.ucalgary.ca/People/vigmond/flounder/
 EXTRACT_SUFX=	.tgz
@@ -18,7 +18,7 @@ COMMENT=	A quick way to visualize regularly spaced 4D data
 
 LIB_DEPENDS=	fltk.1:${PORTSDIR}/x11-toolkits/fltk \
 		ungif:${PORTSDIR}/graphics/libungif \
-		png:${PORTSDIR}/graphics/png
+		png15:${PORTSDIR}/graphics/png
 
 USE_GL=		glut
 GNU_CONFIGURE=	yes
diff --git a/science/flounder/files/patch-PNGwrite.cc b/science/flounder/files/patch-PNGwrite.cc
new file mode 100644
index 000000000000..9906e80c4225
--- /dev/null
+++ b/science/flounder/files/patch-PNGwrite.cc
@@ -0,0 +1,11 @@
+--- src/PNGwrite.cc.orig	2002-12-19 19:56:35.000000000 +0100
++++ src/PNGwrite.cc	2012-05-05 09:40:41.000000000 +0200
+@@ -38,7 +38,7 @@
+ 	  png_destroy_write_struct(&png_ptr,  (png_infopp)NULL);
+ 	  return;
+   }
+-  setjmp(png_ptr->jmpbuf);
++  setjmp( png_jmpbuf(png_ptr));
+   png_init_io(png_ptr, fp);
+ }
+ 
diff --git a/science/g3data/Makefile b/science/g3data/Makefile
index f3d414b2a854..a813be978c93 100644
--- a/science/g3data/Makefile
+++ b/science/g3data/Makefile
@@ -7,7 +7,7 @@
 
 PORTNAME=	g3data
 PORTVERSION=	1.5.3
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	science
 MASTER_SITES=	http://www.frantz.fi/software/
 
diff --git a/science/gchemutils/Makefile b/science/gchemutils/Makefile
index 05f6990fd9e6..f9a42b002bde 100644
--- a/science/gchemutils/Makefile
+++ b/science/gchemutils/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	gchemutils
 PORTVERSION=	0.12.10
+PORTREVISION=	1
 CATEGORIES=	science
 MASTER_SITES=	${MASTER_SITE_SAVANNAH}
 MASTER_SITE_SUBDIR=	${PORTNAME}/0.12
diff --git a/science/gdis/Makefile b/science/gdis/Makefile
index 1ef289841fc5..4d969a0cdd2d 100644
--- a/science/gdis/Makefile
+++ b/science/gdis/Makefile
@@ -8,7 +8,7 @@
 
 PORTNAME=	gdis
 PORTVERSION=	0.89
-PORTREVISION=	5
+PORTREVISION=	6
 CATEGORIES=	science
 MASTER_SITES=	SF/${PORTNAME}/${PORTNAME}/${PORTNAME}-${PORTVERSION}
 EXTRACT_SUFX=	-source.tgz
diff --git a/science/getdp/Makefile b/science/getdp/Makefile
index c5d0b18b0e94..a619284427a1 100644
--- a/science/getdp/Makefile
+++ b/science/getdp/Makefile
@@ -7,7 +7,7 @@
 
 PORTNAME=	getdp
 PORTVERSION=	1.2.1
-PORTREVISION=	15
+PORTREVISION=	16
 CATEGORIES=	science
 MASTER_SITES=	http://www.geuz.org/getdp/src/
 DISTNAME=	${PORTNAME}-${PORTVERSION}-source
diff --git a/science/ghemical/Makefile b/science/ghemical/Makefile
index 4f59ae42eb46..f3b39fe83098 100644
--- a/science/ghemical/Makefile
+++ b/science/ghemical/Makefile
@@ -6,7 +6,7 @@
 
 PORTNAME=	ghemical
 PORTVERSION=	2.99.2
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	science
 MASTER_SITES=	http://www.uku.fi/~thassine/projects/download/release20090911/ \
 		http://bioinformatics.org/ghemical/download/
diff --git a/science/gnudatalanguage/Makefile b/science/gnudatalanguage/Makefile
index 6458ae405a57..11199dd9212c 100644
--- a/science/gnudatalanguage/Makefile
+++ b/science/gnudatalanguage/Makefile
@@ -7,7 +7,7 @@
 
 PORTNAME=	gnudatalanguage
 DISTVERSION=	0.9.2
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science lang
 MASTER_SITES=	SF/${PORTNAME}/gdl/${DISTVERSION}
 .if defined(BUILD_PYTHON_MODULE)
diff --git a/science/gramps/Makefile b/science/gramps/Makefile
index 6a3243a714b5..549114db22d4 100644
--- a/science/gramps/Makefile
+++ b/science/gramps/Makefile
@@ -6,6 +6,7 @@
 
 PORTNAME=	gramps
 PORTVERSION=	3.3.0
+PORTREVISION=	1
 CATEGORIES=	science gnome python
 MASTER_SITES=	SF/${PORTNAME}/Stable/${PORTVERSION}
 DISTNAME=	${PORTNAME}-${PORTVERSION}-1
diff --git a/science/gsmc/Makefile b/science/gsmc/Makefile
index b8060480c8db..ee7ef302da0d 100644
--- a/science/gsmc/Makefile
+++ b/science/gsmc/Makefile
@@ -7,7 +7,7 @@
 
 PORTNAME=	gsmc
 PORTVERSION=	1.1
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	science hamradio
 MASTER_SITES=	http://www.qsl.net/ik5nax/
 
diff --git a/science/gsystem/Makefile b/science/gsystem/Makefile
index ea2f21a31cd8..3c22633db3ea 100644
--- a/science/gsystem/Makefile
+++ b/science/gsystem/Makefile
@@ -7,7 +7,7 @@
 
 PORTNAME=	gsystem
 PORTVERSION=	0.5.1
-PORTREVISION=	6
+PORTREVISION=	7
 CATEGORIES=	science devel games
 MASTER_SITES=	ftp://ftp.g-system.at/pub/gsystem/releases/development/${PORTVERSION}/
 DISTNAME=	G-System-${PORTVERSION}
diff --git a/science/gwyddion/Makefile b/science/gwyddion/Makefile
index e4135783c4b6..5769ec5fcd3b 100644
--- a/science/gwyddion/Makefile
+++ b/science/gwyddion/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	gwyddion
 PORTVERSION=	2.27
+PORTREVISION=	1
 CATEGORIES=	science graphics
 MASTER_SITES=	SF
 
@@ -17,6 +18,7 @@ MAINTAINER=	yeti@gwyddion.net
 COMMENT=	A gtk2 based SPM data visualization and analysis tool
 
 LIB_DEPENDS=	gtkglext-x11-1.0.0:${PORTSDIR}/x11-toolkits/gtkglext \
+		png15:${PORTSDIR}/graphics/png \
 		fftw3:${PORTSDIR}/math/fftw3
 
 GNU_CONFIGURE=	yes
diff --git a/science/gwyddion/files/patch-pixmap.c b/science/gwyddion/files/patch-pixmap.c
new file mode 100644
index 000000000000..85a897fcded2
--- /dev/null
+++ b/science/gwyddion/files/patch-pixmap.c
@@ -0,0 +1,10 @@
+--- modules/file/pixmap.c.orig	2012-01-09 08:43:04.000000000 +0100
++++ modules/file/pixmap.c	2012-05-09 13:09:36.000000000 +0200
+@@ -40,6 +40,7 @@
+ 
+ #ifdef HAVE_PNG
+ #include <png.h>
++#include <zlib.h>
+ #endif
+ 
+ #include <libgwyddion/gwymacros.h>
diff --git a/science/h5utils/Makefile b/science/h5utils/Makefile
index 93d885c16c57..a267d8f9023e 100644
--- a/science/h5utils/Makefile
+++ b/science/h5utils/Makefile
@@ -5,6 +5,7 @@
 
 PORTNAME=	h5utils
 PORTVERSION=	1.12.1
+PORTREVISION=	1
 CATEGORIES=	science
 MASTER_SITES=	http://ab-initio.mit.edu/${PORTNAME}/
 
@@ -18,11 +19,12 @@ LICENSE_FILE=	${WRKSRC}/LICENSE
 MAN1=		h5totxt.1 h5fromtxt.1 h5tovtk.1 h5topng.1 h5math.1
 
 GNU_CONFIGURE=	YES
-CFLAGS +=	-L${LOCALBASE}/lib -I${LOCALBASE}/include ${PTHREAD_LIBS}
+CFLAGS +=	-L${LOCALBASE}/lib -I${LOCALBASE}/include \
+		-I${LOCALBASE}/include/libpng15 ${PTHREAD_LIBS}
 
 BUILD_DEPENDS+=	gawk:${PORTSDIR}/lang/gawk
 LIB_DEPENDS +=	hdf5:${PORTSDIR}/science/hdf5 \
-		png:${PORTSDIR}/graphics/png \
+		png15:${PORTSDIR}/graphics/png \
 		matheval.1:${PORTSDIR}/devel/libmatheval
 
 .include <bsd.port.mk>
diff --git a/science/h5utils/files/patch-writepng.c b/science/h5utils/files/patch-writepng.c
new file mode 100644
index 000000000000..fa98cfe9ea8b
--- /dev/null
+++ b/science/h5utils/files/patch-writepng.c
@@ -0,0 +1,19 @@
+--- writepng.c.orig	2009-06-12 22:58:50.000000000 +0200
++++ writepng.c	2012-05-06 06:49:53.000000000 +0200
+@@ -26,6 +26,7 @@
+ #include <string.h>
+ 
+ #include <png.h>
++#include <pngpriv.h>
+ 
+ #include "writepng.h"
+ 
+@@ -309,7 +310,7 @@
+      }
+      /* Set error handling.  REQUIRED if you aren't supplying your own *
+       * error hadnling functions in the png_create_write_struct() call. */
+-     if (setjmp(png_ptr->jmpbuf)) {
++     if (setjmp(png_jmpbuf(png_ptr))) {
+ 	  /* If we get here, we had a problem reading the file */
+ 	  fclose(fp);
+ 	  png_destroy_write_struct(&png_ptr, (png_infopp) NULL);
diff --git a/science/kalzium/Makefile b/science/kalzium/Makefile
index 58e082acb8a4..782869829523 100644
--- a/science/kalzium/Makefile
+++ b/science/kalzium/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	kalzium
 PORTVERSION=	${KDE4_VERSION}
+PORTREVISION=	1
 CATEGORIES=	science kde
 MASTER_SITES=	${MASTER_SITE_KDE}
 MASTER_SITE_SUBDIR=	${KDE4_BRANCH}/${PORTVERSION}/src
diff --git a/science/kmovisto/Makefile b/science/kmovisto/Makefile
index 306214e43b14..31dfddaf9164 100644
--- a/science/kmovisto/Makefile
+++ b/science/kmovisto/Makefile
@@ -8,7 +8,7 @@
 
 PORTNAME=	kmovisto
 PORTVERSION=	0.7.0
-PORTREVISION=	7
+PORTREVISION=	8
 CATEGORIES=	science
 MASTER_SITES=	http://mitglied.multimania.de/pageofmh/download/
 
diff --git a/science/kst/Makefile b/science/kst/Makefile
index fd07764cdd34..4055086110d7 100644
--- a/science/kst/Makefile
+++ b/science/kst/Makefile
@@ -6,7 +6,7 @@
 
 PORTNAME=	kst
 PORTVERSION=	1.9.1
-PORTREVISION=	4
+PORTREVISION=	5
 CATEGORIES=	science kde
 MASTER_SITES=	${MASTER_SITE_KDE}
 MASTER_SITE_SUBDIR=	stable/apps/KDE3.x/scientific
diff --git a/science/kst2/Makefile b/science/kst2/Makefile
index 24b86b538fa0..45b929e03882 100644
--- a/science/kst2/Makefile
+++ b/science/kst2/Makefile
@@ -6,6 +6,7 @@
 
 PORTNAME=	kst
 DISTVERSION=	2.0.5
+PORTREVISION=	1
 CATEGORIES=	science kde
 MASTER_SITES=	SF/${PORTNAME}/Kst%20${DISTVERSION:C/-r.*//}/
 
diff --git a/science/linsmith/Makefile b/science/linsmith/Makefile
index b2d9b0f7200e..721baa6344e7 100644
--- a/science/linsmith/Makefile
+++ b/science/linsmith/Makefile
@@ -8,6 +8,7 @@
 
 PORTNAME=	linsmith
 PORTVERSION=	0.99.22
+PORTREVISION=	1
 CATEGORIES=	science hamradio
 MASTER_SITES=	SF/${PORTNAME}/${PORTNAME}/${PORTNAME}-${PORTVERSION}
 
diff --git a/science/massxpert/Makefile b/science/massxpert/Makefile
index f4b7629e31c5..1689dc767657 100644
--- a/science/massxpert/Makefile
+++ b/science/massxpert/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	massxpert
 PORTVERSION=	3.1.0
+PORTREVISION=	1
 CATEGORIES=	science
 MASTER_SITES=	http://download.tuxfamily.org/massxpert/source/
 
diff --git a/science/mayavi/Makefile b/science/mayavi/Makefile
index 71654b6ce44c..cef332f2dec3 100644
--- a/science/mayavi/Makefile
+++ b/science/mayavi/Makefile
@@ -8,7 +8,7 @@
 
 PORTNAME=	mayavi
 PORTVERSION=	1.5
-PORTREVISION=	4
+PORTREVISION=	5
 CATEGORIES=	science python
 MASTER_SITES=	SF
 DISTNAME=	MayaVi-${PORTVERSION}
diff --git a/science/mcstas/Makefile b/science/mcstas/Makefile
index 89d503b88ac3..ddad64a190a0 100644
--- a/science/mcstas/Makefile
+++ b/science/mcstas/Makefile
@@ -6,6 +6,7 @@
 
 PORTNAME=	mcstas
 PORTVERSION=	1.12c
+PORTREVISION=	1
 CATEGORIES=	science
 MASTER_SITES=	http://www.mcstas.org/download/ \
 		http://www.c-s.li/ports/
diff --git a/science/mpqc/Makefile b/science/mpqc/Makefile
index 03e2eec0eb81..1184777ade3f 100644
--- a/science/mpqc/Makefile
+++ b/science/mpqc/Makefile
@@ -7,7 +7,7 @@
 
 PORTNAME=	mpqc
 PORTVERSION=	2.3.1
-PORTREVISION=	14
+PORTREVISION=	15
 CATEGORIES=	science parallel
 MASTER_SITES=	SF
 
diff --git a/science/ncs/Makefile b/science/ncs/Makefile
index 738c2f0d74ab..70eae35c66e7 100644
--- a/science/ncs/Makefile
+++ b/science/ncs/Makefile
@@ -7,7 +7,7 @@
 
 PORTNAME=	ncs
 PORTVERSION=	1.3.3
-PORTREVISION=	8
+PORTREVISION=	9
 CATEGORIES=	science parallel
 MASTER_SITES=	http://rd.edf.com/fichiers/fckeditor/File/EDF%20RD/Code_Saturne/Fichiers/
 DISTNAME=	${PORTNAME}-${PORTVERSION:S/.//g}
diff --git a/science/omnetpp/Makefile b/science/omnetpp/Makefile
index 4719c9e7b8ff..5a6705c773e1 100644
--- a/science/omnetpp/Makefile
+++ b/science/omnetpp/Makefile
@@ -7,7 +7,7 @@
 
 PORTNAME=	omnetpp
 PORTVERSION=	3.3
-PORTREVISION=	5
+PORTREVISION=	6
 CATEGORIES=	science
 MASTER_SITES=	http://www.omnetpp.org/download/release/
 DISTNAME=	${PORTNAME}-${PORTVERSION}-src
diff --git a/science/ovt/Makefile b/science/ovt/Makefile
index 5d6c5c56a2cc..adc0e2a4dcb3 100644
--- a/science/ovt/Makefile
+++ b/science/ovt/Makefile
@@ -7,7 +7,7 @@
 
 PORTNAME=	ovt
 PORTVERSION=	2.3
-PORTREVISION=	8
+PORTREVISION=	9
 CATEGORIES=	science astro java
 MASTER_SITES=	http://ovt.irfu.se/download/
 DISTNAME=	${PORTNAME}-${PORTVERSION}_${OVTBUILD}-src
diff --git a/science/paraview/Makefile b/science/paraview/Makefile
index f8ea66a8fc80..5359a834ed71 100644
--- a/science/paraview/Makefile
+++ b/science/paraview/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	paraview
 PORTVERSION=	3.10.1
+PORTREVISION=	1
 CATEGORIES=	science graphics
 MASTER_SITES=	http://www.paraview.org/files/v${VERMAJORMINOR}/
 DISTNAME=	ParaView-${PORTVERSION}
@@ -15,7 +16,7 @@ MAINTAINER=	devel@stasyan.com
 COMMENT=	Powerful scientific data visualization application
 
 LIB_DEPENDS=	hdf5.7:${PORTSDIR}/science/hdf5-18 \
-		png.6:${PORTSDIR}/graphics/png \
+		png15:${PORTSDIR}/graphics/png \
 		jpeg.11:${PORTSDIR}/graphics/jpeg \
 		tiff.4:${PORTSDIR}/graphics/tiff \
 		freetype.9:${PORTSDIR}/print/freetype2 \
diff --git a/science/peekabot/Makefile b/science/peekabot/Makefile
index b30a882dd023..3b0cd11b9e77 100644
--- a/science/peekabot/Makefile
+++ b/science/peekabot/Makefile
@@ -7,7 +7,7 @@
 
 PORTNAME=	peekabot
 PORTVERSION=	0.8.6
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 MASTER_SITES=	SF/${PORTNAME}/${PORTNAME}/${PORTVERSION:R}.x
 
diff --git a/science/psychopy/Makefile b/science/psychopy/Makefile
index dd6645a23c61..312641bba50e 100644
--- a/science/psychopy/Makefile
+++ b/science/psychopy/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	psychopy
 PORTVERSION=	1.65.00
+PORTREVISION=	1
 CATEGORIES=	science python
 MASTER_SITES=	${MASTER_SITE_GOOGLE_CODE}
 DISTNAME=	PsychoPy-${PORTVERSION}
diff --git a/science/py-hcluster/Makefile b/science/py-hcluster/Makefile
index c06599c90339..9382ac4c0f03 100644
--- a/science/py-hcluster/Makefile
+++ b/science/py-hcluster/Makefile
@@ -7,7 +7,7 @@
 
 PORTNAME=	hcluster
 PORTVERSION=	0.2.0
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	science python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
diff --git a/science/py-obspy-core/Makefile b/science/py-obspy-core/Makefile
index 6fa4de83826a..2a7ca5c331f0 100644
--- a/science/py-obspy-core/Makefile
+++ b/science/py-obspy-core/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	obspy-core
 PORTVERSION=	0.6.2
+PORTREVISION=	1
 CATEGORIES=	science python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
diff --git a/science/py-obspy.db/Makefile b/science/py-obspy.db/Makefile
index f7aa4fd0487c..1d072c0b3ac8 100644
--- a/science/py-obspy.db/Makefile
+++ b/science/py-obspy.db/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	obspy.db
 PORTVERSION=	0.5.1
+PORTREVISION=	1
 CATEGORIES=	science python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
diff --git a/science/py-obspy.gse2/Makefile b/science/py-obspy.gse2/Makefile
index e9b0d9667c1f..10ecf5b38353 100644
--- a/science/py-obspy.gse2/Makefile
+++ b/science/py-obspy.gse2/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	obspy.gse2
 PORTVERSION=	0.5.1
+PORTREVISION=	1
 CATEGORIES=	science python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
diff --git a/science/py-obspy.imaging/Makefile b/science/py-obspy.imaging/Makefile
index 0be6d667c41d..bfd554e712ea 100644
--- a/science/py-obspy.imaging/Makefile
+++ b/science/py-obspy.imaging/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	obspy.imaging
 PORTVERSION=	0.5.1
+PORTREVISION=	1
 CATEGORIES=	science python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
diff --git a/science/py-obspy.iris/Makefile b/science/py-obspy.iris/Makefile
index 1c0a59305d65..813a0fefa328 100644
--- a/science/py-obspy.iris/Makefile
+++ b/science/py-obspy.iris/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	obspy.iris
 PORTVERSION=	0.5.1
+PORTREVISION=	1
 CATEGORIES=	science python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
diff --git a/science/py-obspy.mseed/Makefile b/science/py-obspy.mseed/Makefile
index 7e0194291eda..2aaa6b7a2ad4 100644
--- a/science/py-obspy.mseed/Makefile
+++ b/science/py-obspy.mseed/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	obspy.mseed
 PORTVERSION=	0.6.1
+PORTREVISION=	1
 CATEGORIES=	science python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
diff --git a/science/py-obspy.signal/Makefile b/science/py-obspy.signal/Makefile
index 879cbe2186a6..7f72cd0f9812 100644
--- a/science/py-obspy.signal/Makefile
+++ b/science/py-obspy.signal/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	obspy.signal
 PORTVERSION=	0.6.1
+PORTREVISION=	1
 CATEGORIES=	science python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
diff --git a/science/py-obspy.taup/Makefile b/science/py-obspy.taup/Makefile
index 029d6464591e..e54f6f438018 100644
--- a/science/py-obspy.taup/Makefile
+++ b/science/py-obspy.taup/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	obspy.taup
 PORTVERSION=	0.5.1
+PORTREVISION=	1
 CATEGORIES=	science python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
diff --git a/science/py-obspy.wav/Makefile b/science/py-obspy.wav/Makefile
index 82129a3f7a26..f7900a1bfe56 100644
--- a/science/py-obspy.wav/Makefile
+++ b/science/py-obspy.wav/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	obspy.wav
 PORTVERSION=	0.5.1
+PORTREVISION=	1
 CATEGORIES=	science python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
diff --git a/science/py-obspy.xseed/Makefile b/science/py-obspy.xseed/Makefile
index 6d2f884f3b35..efe98999a484 100644
--- a/science/py-obspy.xseed/Makefile
+++ b/science/py-obspy.xseed/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	obspy.xseed
 PORTVERSION=	0.5.2
+PORTREVISION=	1
 CATEGORIES=	science python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
diff --git a/science/qtresistors/Makefile b/science/qtresistors/Makefile
index 5f4879a7636e..5be7ec70fcd6 100644
--- a/science/qtresistors/Makefile
+++ b/science/qtresistors/Makefile
@@ -7,7 +7,7 @@
 
 PORTNAME=	qtresistors
 PORTVERSION=	0.1
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 MASTER_SITES=	http://qt-apps.org/CONTENT/content-files/
 DISTNAME=	118297-qtResistors-201001102229
diff --git a/science/ruby-dcl/Makefile b/science/ruby-dcl/Makefile
index 1ada91b1dc48..58d6c4c6d02b 100644
--- a/science/ruby-dcl/Makefile
+++ b/science/ruby-dcl/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	dcl
 PORTVERSION=	1.6.3
+PORTREVISION=	1
 CATEGORIES=	science graphics ruby
 MASTER_SITES=	http://ruby.gfd-dennou.org/products/ruby-dcl/release/ \
 		http://dennou-h.gfd-dennou.org/library/ruby/products/ruby-dcl/release/ \
diff --git a/science/ruby-gphys/Makefile b/science/ruby-gphys/Makefile
index 9b67a61d8b05..4bd43f9ff094 100644
--- a/science/ruby-gphys/Makefile
+++ b/science/ruby-gphys/Makefile
@@ -7,7 +7,7 @@
 
 PORTNAME=	gphys
 PORTVERSION=	1.0.0
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science ruby
 MASTER_SITES=	http://ruby.gfd-dennou.org/products/gphys/ \
 		http://dennou-h.gfd-dennou.org/library/ruby/products/gphys/ \
diff --git a/science/silo/Makefile b/science/silo/Makefile
index 7b8a4ad2041a..c670496e4c23 100644
--- a/science/silo/Makefile
+++ b/science/silo/Makefile
@@ -7,7 +7,7 @@
 
 PORTNAME=	silo
 PORTVERSION=	4.6.2
-PORTREVISION=	7
+PORTREVISION=	8
 CATEGORIES=	science
 MASTER_SITES=	https://wci.llnl.gov/codes/${PORTNAME}/silo-${PORTVERSION}/
 
diff --git a/science/step/Makefile b/science/step/Makefile
index 01a47953faec..0e1eda188146 100644
--- a/science/step/Makefile
+++ b/science/step/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	step
 PORTVERSION=	${KDE4_VERSION}
+PORTREVISION=	1
 CATEGORIES=	science kde
 MASTER_SITES=	${MASTER_SITE_KDE}
 MASTER_SITE_SUBDIR=	${KDE4_BRANCH}/${PORTVERSION}/src
diff --git a/science/v_sim/Makefile b/science/v_sim/Makefile
index 9834a6cbce85..0e649c6891e4 100644
--- a/science/v_sim/Makefile
+++ b/science/v_sim/Makefile
@@ -6,6 +6,7 @@
 
 PORTNAME=	v_sim
 PORTVERSION=	3.5.2
+PORTREVISION=	1
 CATEGORIES=	science
 MASTER_SITES=	http://www-drfmc.cea.fr/sp2m/L_Sim/V_Sim/download/
 
diff --git a/science/veusz/Makefile b/science/veusz/Makefile
index 92d7935250ad..70a2189632fb 100644
--- a/science/veusz/Makefile
+++ b/science/veusz/Makefile
@@ -7,7 +7,7 @@
 
 PORTNAME=	veusz
 PORTVERSION=	1.12
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science kde
 MASTER_SITES=	http://download.gna.org/veusz/
 
diff --git a/science/vis5d+/Makefile b/science/vis5d+/Makefile
index 25ce8373f168..baf649badf65 100644
--- a/science/vis5d+/Makefile
+++ b/science/vis5d+/Makefile
@@ -8,7 +8,7 @@
 
 PORTNAME=	vis5d+
 PORTVERSION=	1.2.1
-PORTREVISION=	15
+PORTREVISION=	16
 CATEGORIES=	science
 MASTER_SITES=	SF/vis5d/vis5d/${PORTVERSION}