science/dwave-preprocessing: Update 0.4.0 → 0.5.4

Reported by:	portscout

3 files changed, 32 insertions, 21 deletions

diff --git a/science/dwave-preprocessing/files/patch-dwave_preprocessing_include_dwave_presolve.h b/science/dwave-preprocessing/files/patch-dwave_preprocessing_include_dwave_presolve.h
new file mode 100644
index 000000000000..729aad02ae68
--- /dev/null
+++ b/science/dwave-preprocessing/files/patch-dwave_preprocessing_include_dwave_presolve.h
@@ -0,0 +1,11 @@
+--- dwave/preprocessing/include/dwave/presolve.h.orig	2023-06-18 18:36:53 UTC
++++ dwave/preprocessing/include/dwave/presolve.h
+@@ -19,7 +19,7 @@
+ #include <utility>
+ #include <vector>
+ 
+-#include "spdlog/spdlog.h"
++#include <spdlog/spdlog.h>
+ #include "dimod/constrained_quadratic_model.h"
+ 
+ namespace dwave {
diff --git a/science/dwave-preprocessing/files/patch-testscpp_Makefile b/science/dwave-preprocessing/files/patch-testscpp_Makefile
index 35530211b3d6..e8c4e6997413 100644
--- a/science/dwave-preprocessing/files/patch-testscpp_Makefile
+++ b/science/dwave-preprocessing/files/patch-testscpp_Makefile
@@ -1,32 +1,32 @@
---- testscpp/Makefile.orig	2022-05-07 23:28:35 UTC
+--- testscpp/Makefile.orig	2022-12-19 19:58:20 UTC
 +++ testscpp/Makefile
-@@ -1,22 +1,22 @@
- ROOT := ../
+@@ -1,10 +1,10 @@
+ ROOT := ..
  SRC := $(ROOT)/dwave/preprocessing/
+ CATCH2 := $(ROOT)/testscpp/Catch2/single_include/
 -DIMOD := $(shell python -c 'import dimod; print(dimod.get_include())')
 +#DIMOD := $(shell python -c 'import dimod; print(dimod.get_include())')
+ SPDLOG := $(ROOT)/extern/spdlog/include/
+ INCLUDES := -I $(SRC)/include/ -I $(DIMOD) -I $(CATCH2) -I $(SPDLOG)
+-FLAGS := -std=c++17 -Wall -Wno-unknown-pragmas -Wno-sign-compare -Wno-deprecated-declarations -fcompare-debug-second -O3 
++FLAGS := ${CXXFLAGS} -std=c++17 -Wall -Wno-unknown-pragmas -Wno-sign-compare -Wno-deprecated-declarations
  
- all: catch2 test_main test_main_parallel tests tests_parallel
+ all: update test_main test_main_parallel tests tests_parallel
  
--tests: test_main.out
-+tests: test_main
- 	./test_main 
- 
--tests_parallel: test_main_parallel.out
-+tests_parallel: test_main_parallel
+@@ -15,12 +15,12 @@ tests_parallel: test_main_parallel.out
  	./test_main_parallel
  
  test_main: test_main.cpp
--	g++ -std=c++11 -Wall -c test_main.cpp
--	g++ -std=c++11 -Wall test_main.o tests/*.cpp -o test_main -I $(SRC)/include/ -I $(DIMOD)
-+	${CXX} `pkg-config --cflags catch2` -std=c++11 -Wall -c test_main.cpp
-+	${CXX} `pkg-config --cflags catch2` -std=c++11 -Wall test_main.o tests/*.cpp -o test_main -I $(SRC)/include/ -I $(DIMOD)
+-	g++ $(FLAGS) -c test_main.cpp
+-	g++ $(FLAGS) test_main.o tests/*.cpp -o test_main $(INCLUDES)
++	${CXX} $(FLAGS) -c test_main.cpp
++	${CXX} $(FLAGS) ${LDFLAGS} test_main.o tests/*.cpp -o test_main $(INCLUDES)
  
  test_main_parallel: test_main.cpp
--	g++ -std=c++11 -fopenmp -Wall -c test_main.cpp -o test_main_parallel.o
--	g++ -std=c++11 -fopenmp -Wall test_main_parallel.o tests/*.cpp -o test_main_parallel -I $(SRC)/include/ -I $(DIMOD)
-+	${CXX} `pkg-config --cflags catch2` -std=c++11 -fopenmp -Wall -c test_main.cpp -o test_main_parallel.o
-+	${CXX} `pkg-config --cflags catch2` -std=c++11 -fopenmp -Wall test_main_parallel.o tests/*.cpp -o test_main_parallel -I $(SRC)/include/ -I $(DIMOD)
+-	g++ $(FLAGS) -fopenmp -c test_main.cpp -o test_main_parallel.o
+-	g++ $(FLAGS) -fopenmp test_main_parallel.o tests/*.cpp -o test_main_parallel $(INCLUDES)
++	${CXX} $(FLAGS) -fopenmp -c test_main.cpp -o test_main_parallel.o
++	${CXX} $(FLAGS) ${LDFLAGS} -fopenmp test_main_parallel.o tests/*.cpp -o test_main_parallel $(INCLUDES)
  
- catch2:
+ update:
  	git submodule init
diff --git a/science/dwave-preprocessing/files/patch-testscpp_tests_test__roof__duality.cpp b/science/dwave-preprocessing/files/patch-testscpp_tests_test__roof__duality.cpp
index 01a4bff4b58c..e679ab3df1c0 100644
--- a/science/dwave-preprocessing/files/patch-testscpp_tests_test__roof__duality.cpp
+++ b/science/dwave-preprocessing/files/patch-testscpp_tests_test__roof__duality.cpp
@@ -1,10 +1,10 @@
---- testscpp/tests/test_roof_duality.cpp.orig	2022-08-28 01:26:12 UTC
+--- testscpp/tests/test_roof_duality.cpp.orig	2022-12-19 19:58:20 UTC
 +++ testscpp/tests/test_roof_duality.cpp
 @@ -12,7 +12,7 @@
  // See the License for the specific language governing permissions and
  // limitations under the License.
  
--#include "../Catch2/single_include/catch2/catch.hpp"
+-#include "catch2/catch.hpp"
 +#include <catch2/catch.hpp>
  #include <dimod/quadratic_model.h>