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authorJoseph Mingrone <jrm@FreeBSD.org>2020-05-05 16:07:53 +0000
committerJoseph Mingrone <jrm@FreeBSD.org>2020-05-05 16:07:53 +0000
commita0a98863caa692b26f90ee45a3cda113bc4e1abf (patch)
tree05fb244a0bd455905f747077657ebe20dff0ec44 /math
parentnet-mgmt/chillispot: revert r534081, net/openradius was rescued in r534057 (diff)
math/R: Update to version 4.0.0
Upstream changes: https://stat.ethz.ch/pipermail/r-announce/2020/000653.html Also bump PORTREVISION of ports that depend on math/R. Submitted by: wen (in part) Reviewed by: jwb, Rainer Hurling <rhurlin@gwdg.de>, thierry Differential Revision: https://reviews.freebsd.org/D24572
Notes
Notes: svn path=/head/; revision=534095
Diffstat (limited to 'math')
-rw-r--r--math/R-cran-ADGofTest/Makefile1
-rw-r--r--math/R-cran-Amelia/Makefile1
-rw-r--r--math/R-cran-BsMD/Makefile2
-rw-r--r--math/R-cran-CVST/Makefile2
-rw-r--r--math/R-cran-ChangeAnomalyDetection/Makefile2
-rw-r--r--math/R-cran-DEoptimR/Makefile2
-rw-r--r--math/R-cran-DRR/Makefile1
-rw-r--r--math/R-cran-DoE.base/Makefile2
-rw-r--r--math/R-cran-Formula/Makefile2
-rw-r--r--math/R-cran-FrF2/Makefile2
-rw-r--r--math/R-cran-KFAS/Makefile2
-rw-r--r--math/R-cran-LearnBayes/Makefile2
-rw-r--r--math/R-cran-MCMCpack/Makefile1
-rw-r--r--math/R-cran-MSwM/Makefile2
-rw-r--r--math/R-cran-MatchIt/Makefile2
-rw-r--r--math/R-cran-Matching/Makefile1
-rw-r--r--math/R-cran-MatrixModels/Makefile2
-rw-r--r--math/R-cran-NMF/Makefile2
-rw-r--r--math/R-cran-RHmm/Makefile2
-rw-r--r--math/R-cran-RSvgDevice/Makefile2
-rw-r--r--math/R-cran-RcppArmadillo/Makefile1
-rw-r--r--math/R-cran-RcppEigen/Makefile1
-rw-r--r--math/R-cran-RcppRoll/Makefile2
-rw-r--r--math/R-cran-Rmpfr/Makefile1
-rw-r--r--math/R-cran-Rsolnp/Makefile2
-rw-r--r--math/R-cran-SQUAREM/Makefile1
-rw-r--r--math/R-cran-SparseM/Makefile1
-rw-r--r--math/R-cran-VGAM/Makefile1
-rw-r--r--math/R-cran-Zelig/Makefile2
-rw-r--r--math/R-cran-acepack/Makefile1
-rw-r--r--math/R-cran-alabama/Makefile1
-rw-r--r--math/R-cran-assertthat/Makefile2
-rw-r--r--math/R-cran-backports/Makefile1
-rw-r--r--math/R-cran-bdsmatrix/Makefile1
-rw-r--r--math/R-cran-car/Makefile1
-rw-r--r--math/R-cran-carData/Makefile1
-rw-r--r--math/R-cran-coda/Makefile1
-rw-r--r--math/R-cran-combinat/Makefile2
-rw-r--r--math/R-cran-conf.design/Makefile2
-rw-r--r--math/R-cran-ddalpha/Makefile1
-rw-r--r--math/R-cran-deldir/Makefile1
-rw-r--r--math/R-cran-dimRed/Makefile2
-rw-r--r--math/R-cran-dlmodeler/Makefile2
-rw-r--r--math/R-cran-dplyr/Makefile1
-rw-r--r--math/R-cran-expm/Makefile2
-rw-r--r--math/R-cran-forcats/Makefile1
-rw-r--r--math/R-cran-forecast/Makefile1
-rw-r--r--math/R-cran-fracdiff/Makefile1
-rw-r--r--math/R-cran-geepack/Makefile1
-rw-r--r--math/R-cran-geometry/Makefile1
-rw-r--r--math/R-cran-gmp/Makefile1
-rw-r--r--math/R-cran-gower/Makefile2
-rw-r--r--math/R-cran-gpclib/Makefile1
-rw-r--r--math/R-cran-gss/Makefile1
-rw-r--r--math/R-cran-gtable/Makefile2
-rw-r--r--math/R-cran-haven/Makefile1
-rw-r--r--math/R-cran-igraph/Makefile1
-rw-r--r--math/R-cran-influenceR/Makefile2
-rw-r--r--math/R-cran-inline/Makefile2
-rw-r--r--math/R-cran-ipred/Makefile2
-rw-r--r--math/R-cran-irlba/Makefile2
-rw-r--r--math/R-cran-isoband/Makefile1
-rw-r--r--math/R-cran-labeling/Makefile2
-rw-r--r--math/R-cran-lava/Makefile1
-rw-r--r--math/R-cran-lazyeval/Makefile2
-rw-r--r--math/R-cran-linprog/Makefile1
-rw-r--r--math/R-cran-lme4/Makefile1
-rw-r--r--math/R-cran-lpSolve/Makefile1
-rw-r--r--math/R-cran-magic/Makefile2
-rw-r--r--math/R-cran-maxLik/Makefile1
-rw-r--r--math/R-cran-mcmc/Makefile1
-rw-r--r--math/R-cran-memisc/Makefile1
-rw-r--r--math/R-cran-minqa/Makefile2
-rw-r--r--math/R-cran-miscTools/Makefile1
-rw-r--r--math/R-cran-mitools/Makefile2
-rw-r--r--math/R-cran-mvtnorm/Makefile2
-rw-r--r--math/R-cran-nloptr/Makefile1
-rw-r--r--math/R-cran-nnls/Makefile2
-rw-r--r--math/R-cran-nortest/Makefile2
-rw-r--r--math/R-cran-numDeriv/Makefile2
-rw-r--r--math/R-cran-numbers/Makefile1
-rw-r--r--math/R-cran-outliers/Makefile2
-rw-r--r--math/R-cran-partitions/Makefile1
-rw-r--r--math/R-cran-pbkrtest/Makefile1
-rw-r--r--math/R-cran-pls/Makefile1
-rw-r--r--math/R-cran-polynom/Makefile2
-rw-r--r--math/R-cran-prodlim/Makefile2
-rw-r--r--math/R-cran-psych/Makefile2
-rw-r--r--math/R-cran-quadprog/Makefile1
-rw-r--r--math/R-cran-qualityTools/Makefile2
-rw-r--r--math/R-cran-quantreg/Makefile1
-rw-r--r--math/R-cran-raster/Makefile1
-rw-r--r--math/R-cran-recipes/Makefile1
-rw-r--r--math/R-cran-rgenoud/Makefile2
-rw-r--r--math/R-cran-robustbase/Makefile1
-rw-r--r--math/R-cran-sandwich/Makefile2
-rw-r--r--math/R-cran-scatterplot3d/Makefile2
-rw-r--r--math/R-cran-sets/Makefile1
-rw-r--r--math/R-cran-sf/Makefile1
-rw-r--r--math/R-cran-sm/Makefile2
-rw-r--r--math/R-cran-sp/Makefile1
-rw-r--r--math/R-cran-spData/Makefile1
-rw-r--r--math/R-cran-spdep/Makefile1
-rw-r--r--math/R-cran-sspir/Makefile2
-rw-r--r--math/R-cran-stabledist/Makefile2
-rw-r--r--math/R-cran-statmod/Makefile1
-rw-r--r--math/R-cran-survey/Makefile1
-rw-r--r--math/R-cran-truncnorm/Makefile2
-rw-r--r--math/R-cran-units/Makefile1
-rw-r--r--math/R-cran-uroot/Makefile1
-rw-r--r--math/R-cran-xts/Makefile1
-rw-r--r--math/R-cran-zoo/Makefile1
-rw-r--r--math/R/Makefile17
-rw-r--r--math/R/distinfo6
-rw-r--r--math/R/files/extra-patch-src_extra_blas_Makefile.in27
-rw-r--r--math/R/files/extra-patch-src_modules_lapack_Makefile.in36
-rw-r--r--math/R/files/patch-src_main_Makefile.in18
-rw-r--r--math/R/pkg-plist10
-rw-r--r--math/ess/Makefile2
-rw-r--r--math/p5-Statistics-R/Makefile2
-rw-r--r--math/rkward-kde/Makefile1
121 files changed, 188 insertions, 94 deletions
diff --git a/math/R-cran-ADGofTest/Makefile b/math/R-cran-ADGofTest/Makefile
index 48a6a99ad1f4..99c4de867a8d 100644
--- a/math/R-cran-ADGofTest/Makefile
+++ b/math/R-cran-ADGofTest/Makefile
@@ -3,6 +3,7 @@
PORTNAME= ADGofTest
PORTVERSION= 0.3
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-Amelia/Makefile b/math/R-cran-Amelia/Makefile
index c24df19a7a0d..4917f3017a14 100644
--- a/math/R-cran-Amelia/Makefile
+++ b/math/R-cran-Amelia/Makefile
@@ -3,6 +3,7 @@
PORTNAME= Amelia
DISTVERSION= 1.7.6
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-BsMD/Makefile b/math/R-cran-BsMD/Makefile
index d98ea9a8d679..551c5da0f6b1 100644
--- a/math/R-cran-BsMD/Makefile
+++ b/math/R-cran-BsMD/Makefile
@@ -3,7 +3,7 @@
PORTNAME= BsMD
DISTVERSION= 2013.0718-1
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-CVST/Makefile b/math/R-cran-CVST/Makefile
index 3684e5faa03d..22abe37b60e3 100644
--- a/math/R-cran-CVST/Makefile
+++ b/math/R-cran-CVST/Makefile
@@ -3,7 +3,7 @@
PORTNAME= CVST
DISTVERSION= 0.2-2
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-ChangeAnomalyDetection/Makefile b/math/R-cran-ChangeAnomalyDetection/Makefile
index a32de26c0831..cd5bc58a0f00 100644
--- a/math/R-cran-ChangeAnomalyDetection/Makefile
+++ b/math/R-cran-ChangeAnomalyDetection/Makefile
@@ -3,7 +3,7 @@
PORTNAME= ChangeAnomalyDetection
PORTVERSION= 0.1.0
-PORTREVISION= 8
+PORTREVISION= 9
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-DEoptimR/Makefile b/math/R-cran-DEoptimR/Makefile
index 3c36a209985f..aca6929f0b4d 100644
--- a/math/R-cran-DEoptimR/Makefile
+++ b/math/R-cran-DEoptimR/Makefile
@@ -3,7 +3,7 @@
PORTNAME= DEoptimR
DISTVERSION= 1.0-8
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-DRR/Makefile b/math/R-cran-DRR/Makefile
index 264f7ca446a4..d7a3b2cfa582 100644
--- a/math/R-cran-DRR/Makefile
+++ b/math/R-cran-DRR/Makefile
@@ -3,6 +3,7 @@
PORTNAME= DRR
PORTVERSION= 0.0.4
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-DoE.base/Makefile b/math/R-cran-DoE.base/Makefile
index 616b2e4c1655..7f1528bb3f4d 100644
--- a/math/R-cran-DoE.base/Makefile
+++ b/math/R-cran-DoE.base/Makefile
@@ -3,7 +3,7 @@
PORTNAME= DoE.base
DISTVERSION= 1.1-3
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math devel
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-Formula/Makefile b/math/R-cran-Formula/Makefile
index cefcf05ac5fd..89597e2107e2 100644
--- a/math/R-cran-Formula/Makefile
+++ b/math/R-cran-Formula/Makefile
@@ -3,7 +3,7 @@
PORTNAME= Formula
DISTVERSION= 1.2-3
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-FrF2/Makefile b/math/R-cran-FrF2/Makefile
index c657b2314009..2266a793b8ef 100644
--- a/math/R-cran-FrF2/Makefile
+++ b/math/R-cran-FrF2/Makefile
@@ -3,7 +3,7 @@
PORTNAME= FrF2
DISTVERSION= 1.7-3
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-KFAS/Makefile b/math/R-cran-KFAS/Makefile
index d0a01a4732ba..e49dfd39f441 100644
--- a/math/R-cran-KFAS/Makefile
+++ b/math/R-cran-KFAS/Makefile
@@ -3,7 +3,7 @@
PORTNAME= KFAS
PORTVERSION= 1.3.7
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-LearnBayes/Makefile b/math/R-cran-LearnBayes/Makefile
index 7111bab5d181..4d76bd2f041e 100644
--- a/math/R-cran-LearnBayes/Makefile
+++ b/math/R-cran-LearnBayes/Makefile
@@ -3,7 +3,7 @@
PORTNAME= LearnBayes
PORTVERSION= 2.15.1
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-MCMCpack/Makefile b/math/R-cran-MCMCpack/Makefile
index d70c7484a95e..36aa9ce887bd 100644
--- a/math/R-cran-MCMCpack/Makefile
+++ b/math/R-cran-MCMCpack/Makefile
@@ -3,6 +3,7 @@
PORTNAME= MCMCpack
DISTVERSION= 1.4-6
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-MSwM/Makefile b/math/R-cran-MSwM/Makefile
index de1d616225ad..f34df6f17ace 100644
--- a/math/R-cran-MSwM/Makefile
+++ b/math/R-cran-MSwM/Makefile
@@ -3,7 +3,7 @@
PORTNAME= MSwM
PORTVERSION= 1.4
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-MatchIt/Makefile b/math/R-cran-MatchIt/Makefile
index 11f1afe582ef..1cccb89f0390 100644
--- a/math/R-cran-MatchIt/Makefile
+++ b/math/R-cran-MatchIt/Makefile
@@ -3,7 +3,7 @@
PORTNAME= MatchIt
DISTVERSION= 3.0.2
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-Matching/Makefile b/math/R-cran-Matching/Makefile
index 5a33494d6fa2..93a3ab528b4f 100644
--- a/math/R-cran-Matching/Makefile
+++ b/math/R-cran-Matching/Makefile
@@ -3,6 +3,7 @@
PORTNAME= Matching
DISTVERSION= 4.9-7
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-MatrixModels/Makefile b/math/R-cran-MatrixModels/Makefile
index adbf5720865e..cec62ea14492 100644
--- a/math/R-cran-MatrixModels/Makefile
+++ b/math/R-cran-MatrixModels/Makefile
@@ -3,7 +3,7 @@
PORTNAME= MatrixModels
DISTVERSION= 0.4-1
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-NMF/Makefile b/math/R-cran-NMF/Makefile
index a706e9eeda47..a30de7ad0e04 100644
--- a/math/R-cran-NMF/Makefile
+++ b/math/R-cran-NMF/Makefile
@@ -3,7 +3,7 @@
PORTNAME= NMF
PORTVERSION= 0.21.0
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-RHmm/Makefile b/math/R-cran-RHmm/Makefile
index 4faadd6147ea..8a0aa446da14 100644
--- a/math/R-cran-RHmm/Makefile
+++ b/math/R-cran-RHmm/Makefile
@@ -3,7 +3,7 @@
PORTNAME= RHmm
PORTVERSION= 2.0.3
-PORTREVISION= 9
+PORTREVISION= 10
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-RSvgDevice/Makefile b/math/R-cran-RSvgDevice/Makefile
index 116e325df7be..f9d0587e7640 100644
--- a/math/R-cran-RSvgDevice/Makefile
+++ b/math/R-cran-RSvgDevice/Makefile
@@ -3,7 +3,7 @@
PORTNAME= RSvgDevice
PORTVERSION= 0.6.4.4
-PORTREVISION= 5
+PORTREVISION= 6
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-RcppArmadillo/Makefile b/math/R-cran-RcppArmadillo/Makefile
index d2bb29c968ad..dd77c902818d 100644
--- a/math/R-cran-RcppArmadillo/Makefile
+++ b/math/R-cran-RcppArmadillo/Makefile
@@ -3,6 +3,7 @@
PORTNAME= RcppArmadillo
PORTVERSION= 0.9.870.2.0
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-RcppEigen/Makefile b/math/R-cran-RcppEigen/Makefile
index 774ebc9c6439..3d1fde6cd999 100644
--- a/math/R-cran-RcppEigen/Makefile
+++ b/math/R-cran-RcppEigen/Makefile
@@ -3,6 +3,7 @@
PORTNAME= RcppEigen
PORTVERSION= 0.3.3.7.0
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-RcppRoll/Makefile b/math/R-cran-RcppRoll/Makefile
index 13180df08d95..35bf0d99f715 100644
--- a/math/R-cran-RcppRoll/Makefile
+++ b/math/R-cran-RcppRoll/Makefile
@@ -3,7 +3,7 @@
PORTNAME= RcppRoll
DISTVERSION= 0.3.0
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-Rmpfr/Makefile b/math/R-cran-Rmpfr/Makefile
index 958600a64845..04451db0d3ca 100644
--- a/math/R-cran-Rmpfr/Makefile
+++ b/math/R-cran-Rmpfr/Makefile
@@ -3,6 +3,7 @@
PORTNAME= Rmpfr
DISTVERSION= 0.8-1
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-Rsolnp/Makefile b/math/R-cran-Rsolnp/Makefile
index 915be1538b98..6c8400671745 100644
--- a/math/R-cran-Rsolnp/Makefile
+++ b/math/R-cran-Rsolnp/Makefile
@@ -3,7 +3,7 @@
PORTNAME= Rsolnp
DISTVERSION= 1.16
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-SQUAREM/Makefile b/math/R-cran-SQUAREM/Makefile
index eb5b7f2bc30a..3289beec342d 100644
--- a/math/R-cran-SQUAREM/Makefile
+++ b/math/R-cran-SQUAREM/Makefile
@@ -3,6 +3,7 @@
PORTNAME= SQUAREM
DISTVERSION= 2020.2
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-SparseM/Makefile b/math/R-cran-SparseM/Makefile
index e5b7bd46709c..9c791ca09702 100644
--- a/math/R-cran-SparseM/Makefile
+++ b/math/R-cran-SparseM/Makefile
@@ -3,6 +3,7 @@
PORTNAME= SparseM
PORTVERSION= 1.78
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-VGAM/Makefile b/math/R-cran-VGAM/Makefile
index 120d0e316abf..680790410c4c 100644
--- a/math/R-cran-VGAM/Makefile
+++ b/math/R-cran-VGAM/Makefile
@@ -3,6 +3,7 @@
PORTNAME= VGAM
DISTVERSION= 1.1-2
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-Zelig/Makefile b/math/R-cran-Zelig/Makefile
index b089d578f961..e3f3a3287603 100644
--- a/math/R-cran-Zelig/Makefile
+++ b/math/R-cran-Zelig/Makefile
@@ -3,7 +3,7 @@
PORTNAME= Zelig
DISTVERSION= 5.1.6.1
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-acepack/Makefile b/math/R-cran-acepack/Makefile
index d8d09b9eb22f..0005894d1304 100644
--- a/math/R-cran-acepack/Makefile
+++ b/math/R-cran-acepack/Makefile
@@ -3,6 +3,7 @@
PORTNAME= acepack
PORTVERSION= 1.4.1
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-alabama/Makefile b/math/R-cran-alabama/Makefile
index 8ca6ebe19f5f..ee1087661067 100644
--- a/math/R-cran-alabama/Makefile
+++ b/math/R-cran-alabama/Makefile
@@ -3,6 +3,7 @@
PORTNAME= alabama
DISTVERSION= 2015.3-1
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-assertthat/Makefile b/math/R-cran-assertthat/Makefile
index 6387592295cd..3567bf736ee1 100644
--- a/math/R-cran-assertthat/Makefile
+++ b/math/R-cran-assertthat/Makefile
@@ -3,7 +3,7 @@
PORTNAME= assertthat
DISTVERSION= 0.2.1
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-backports/Makefile b/math/R-cran-backports/Makefile
index c98f67dbcea5..b74b158e717c 100644
--- a/math/R-cran-backports/Makefile
+++ b/math/R-cran-backports/Makefile
@@ -3,6 +3,7 @@
PORTNAME= backports
PORTVERSION= 1.1.6
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-bdsmatrix/Makefile b/math/R-cran-bdsmatrix/Makefile
index f2c609ddc942..90d8f1a3679c 100644
--- a/math/R-cran-bdsmatrix/Makefile
+++ b/math/R-cran-bdsmatrix/Makefile
@@ -3,6 +3,7 @@
PORTNAME= bdsmatrix
DISTVERSION= 1.3-4
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-car/Makefile b/math/R-cran-car/Makefile
index 0a4455fa8942..cfbae71d7196 100644
--- a/math/R-cran-car/Makefile
+++ b/math/R-cran-car/Makefile
@@ -3,6 +3,7 @@
PORTNAME= car
DISTVERSION= 3.0-7
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-carData/Makefile b/math/R-cran-carData/Makefile
index c1cadfaf4269..fd62182ae839 100644
--- a/math/R-cran-carData/Makefile
+++ b/math/R-cran-carData/Makefile
@@ -2,6 +2,7 @@
PORTNAME= carData
DISTVERSION= 3.0-3
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-coda/Makefile b/math/R-cran-coda/Makefile
index 5ab67a836faa..4c14f7593cff 100644
--- a/math/R-cran-coda/Makefile
+++ b/math/R-cran-coda/Makefile
@@ -3,6 +3,7 @@
PORTNAME= coda
DISTVERSION= 0.19-3
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-combinat/Makefile b/math/R-cran-combinat/Makefile
index fdd9d88e1c5a..27f3b9583914 100644
--- a/math/R-cran-combinat/Makefile
+++ b/math/R-cran-combinat/Makefile
@@ -3,7 +3,7 @@
PORTNAME= combinat
DISTVERSION= 0.0-8
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-conf.design/Makefile b/math/R-cran-conf.design/Makefile
index d6cc55edb5d6..49748c6a1e41 100644
--- a/math/R-cran-conf.design/Makefile
+++ b/math/R-cran-conf.design/Makefile
@@ -3,7 +3,7 @@
PORTNAME= conf.design
DISTVERSION= 2.0.0
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-ddalpha/Makefile b/math/R-cran-ddalpha/Makefile
index cc389dd486d8..c46b857891e1 100644
--- a/math/R-cran-ddalpha/Makefile
+++ b/math/R-cran-ddalpha/Makefile
@@ -3,6 +3,7 @@
PORTNAME= ddalpha
PORTVERSION= 1.3.11
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-deldir/Makefile b/math/R-cran-deldir/Makefile
index 49487a060c57..23f0ee92042a 100644
--- a/math/R-cran-deldir/Makefile
+++ b/math/R-cran-deldir/Makefile
@@ -3,6 +3,7 @@
PORTNAME= deldir
DISTVERSION= 0.1-25
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-dimRed/Makefile b/math/R-cran-dimRed/Makefile
index 31fb99cf76bc..8b78b91140f4 100644
--- a/math/R-cran-dimRed/Makefile
+++ b/math/R-cran-dimRed/Makefile
@@ -3,7 +3,7 @@
PORTNAME= dimRed
PORTVERSION= 0.2.3
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-dlmodeler/Makefile b/math/R-cran-dlmodeler/Makefile
index 4f0f5343609b..66ec72b86864 100644
--- a/math/R-cran-dlmodeler/Makefile
+++ b/math/R-cran-dlmodeler/Makefile
@@ -3,7 +3,7 @@
PORTNAME= dlmodeler
DISTVERSION= 1.4-2
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-dplyr/Makefile b/math/R-cran-dplyr/Makefile
index 7fac503286dd..44eeb4bce4ff 100644
--- a/math/R-cran-dplyr/Makefile
+++ b/math/R-cran-dplyr/Makefile
@@ -3,6 +3,7 @@
PORTNAME= dplyr
DISTVERSION= 0.8.5
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-expm/Makefile b/math/R-cran-expm/Makefile
index 92fb2791298d..d5fec34badcc 100644
--- a/math/R-cran-expm/Makefile
+++ b/math/R-cran-expm/Makefile
@@ -3,7 +3,7 @@
PORTNAME= expm
DISTVERSION= 0.999-4
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-forcats/Makefile b/math/R-cran-forcats/Makefile
index c81e15c7b2a8..97b6fa857a08 100644
--- a/math/R-cran-forcats/Makefile
+++ b/math/R-cran-forcats/Makefile
@@ -2,6 +2,7 @@
PORTNAME= forcats
DISTVERSION= 0.5.0
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-forecast/Makefile b/math/R-cran-forecast/Makefile
index 66bfce165e34..1f803b7408dd 100644
--- a/math/R-cran-forecast/Makefile
+++ b/math/R-cran-forecast/Makefile
@@ -3,6 +3,7 @@
PORTNAME= forecast
PORTVERSION= 8.12
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-fracdiff/Makefile b/math/R-cran-fracdiff/Makefile
index cd59ec05d7f8..114e6182e555 100644
--- a/math/R-cran-fracdiff/Makefile
+++ b/math/R-cran-fracdiff/Makefile
@@ -3,6 +3,7 @@
PORTNAME= fracdiff
DISTVERSION= 1.5-1
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-geepack/Makefile b/math/R-cran-geepack/Makefile
index 9f36a28ffcf3..564b654794ee 100644
--- a/math/R-cran-geepack/Makefile
+++ b/math/R-cran-geepack/Makefile
@@ -3,6 +3,7 @@
PORTNAME= geepack
DISTVERSION= 1.3-1
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-geometry/Makefile b/math/R-cran-geometry/Makefile
index 58667911482e..af5dec79ff3e 100644
--- a/math/R-cran-geometry/Makefile
+++ b/math/R-cran-geometry/Makefile
@@ -3,6 +3,7 @@
PORTNAME= geometry
DISTVERSION= 0.4.5
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-gmp/Makefile b/math/R-cran-gmp/Makefile
index dda9fd29fadb..60b330ae9f15 100644
--- a/math/R-cran-gmp/Makefile
+++ b/math/R-cran-gmp/Makefile
@@ -3,6 +3,7 @@
PORTNAME= gmp
DISTVERSION= 0.5-13.6
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-gower/Makefile b/math/R-cran-gower/Makefile
index 368e11392300..f887e8eaa41f 100644
--- a/math/R-cran-gower/Makefile
+++ b/math/R-cran-gower/Makefile
@@ -3,7 +3,7 @@
PORTNAME= gower
DISTVERSION= 0.2.1
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-gpclib/Makefile b/math/R-cran-gpclib/Makefile
index a6a83b6a5445..a64ee543c6e9 100644
--- a/math/R-cran-gpclib/Makefile
+++ b/math/R-cran-gpclib/Makefile
@@ -3,6 +3,7 @@
PORTNAME= gpclib
DISTVERSION= 1.5-6
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-gss/Makefile b/math/R-cran-gss/Makefile
index 24224f939843..ac809d499b56 100644
--- a/math/R-cran-gss/Makefile
+++ b/math/R-cran-gss/Makefile
@@ -3,6 +3,7 @@
PORTNAME= gss
DISTVERSION= 2.1-12
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-gtable/Makefile b/math/R-cran-gtable/Makefile
index 0d284de47e2d..c7533733a56b 100644
--- a/math/R-cran-gtable/Makefile
+++ b/math/R-cran-gtable/Makefile
@@ -2,7 +2,7 @@
PORTNAME= gtable
PORTVERSION= 0.3.0
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-haven/Makefile b/math/R-cran-haven/Makefile
index 91d3855faec5..236e84ef3228 100644
--- a/math/R-cran-haven/Makefile
+++ b/math/R-cran-haven/Makefile
@@ -2,6 +2,7 @@
PORTNAME= haven
DISTVERSION= 2.2.0
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-igraph/Makefile b/math/R-cran-igraph/Makefile
index 3458a6b78b4c..36f81ba2ff7f 100644
--- a/math/R-cran-igraph/Makefile
+++ b/math/R-cran-igraph/Makefile
@@ -3,6 +3,7 @@
PORTNAME= igraph
DISTVERSION= 1.2.5
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-influenceR/Makefile b/math/R-cran-influenceR/Makefile
index 4c09cb60934b..b6ef2db8ec73 100644
--- a/math/R-cran-influenceR/Makefile
+++ b/math/R-cran-influenceR/Makefile
@@ -3,7 +3,7 @@
PORTNAME= influenceR
PORTVERSION= 0.1.0
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-inline/Makefile b/math/R-cran-inline/Makefile
index bf9c631f0f67..5ef10fa44b0d 100644
--- a/math/R-cran-inline/Makefile
+++ b/math/R-cran-inline/Makefile
@@ -3,7 +3,7 @@
PORTNAME= inline
PORTVERSION= 0.3.15
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-ipred/Makefile b/math/R-cran-ipred/Makefile
index 2d7a711f547e..06ccba4f41c2 100644
--- a/math/R-cran-ipred/Makefile
+++ b/math/R-cran-ipred/Makefile
@@ -3,7 +3,7 @@
PORTNAME= ipred
DISTVERSION= 0.9-9
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-irlba/Makefile b/math/R-cran-irlba/Makefile
index e86f2daa1a2a..c637325b0315 100644
--- a/math/R-cran-irlba/Makefile
+++ b/math/R-cran-irlba/Makefile
@@ -3,7 +3,7 @@
PORTNAME= irlba
PORTVERSION= 2.3.3
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-isoband/Makefile b/math/R-cran-isoband/Makefile
index ebc39d54240b..c19342514b84 100644
--- a/math/R-cran-isoband/Makefile
+++ b/math/R-cran-isoband/Makefile
@@ -2,6 +2,7 @@
PORTNAME= isoband
PORTVERSION= 0.2.1
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-labeling/Makefile b/math/R-cran-labeling/Makefile
index 4eddd2aa077f..dff8efdebbfe 100644
--- a/math/R-cran-labeling/Makefile
+++ b/math/R-cran-labeling/Makefile
@@ -3,7 +3,7 @@
PORTNAME= labeling
PORTVERSION= 0.3
-PORTREVISION= 4
+PORTREVISION= 5
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-lava/Makefile b/math/R-cran-lava/Makefile
index dda691306fa8..4c487f29d2d1 100644
--- a/math/R-cran-lava/Makefile
+++ b/math/R-cran-lava/Makefile
@@ -3,6 +3,7 @@
PORTNAME= lava
DISTVERSION= 1.6.7
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-lazyeval/Makefile b/math/R-cran-lazyeval/Makefile
index 7b635ca535ad..ad30a847d19e 100644
--- a/math/R-cran-lazyeval/Makefile
+++ b/math/R-cran-lazyeval/Makefile
@@ -3,7 +3,7 @@
PORTNAME= lazyeval
DISTVERSION= 0.2.2
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-linprog/Makefile b/math/R-cran-linprog/Makefile
index 0a40cec25e31..ed9330e41981 100644
--- a/math/R-cran-linprog/Makefile
+++ b/math/R-cran-linprog/Makefile
@@ -2,6 +2,7 @@
PORTNAME= linprog
DISTVERSION= 0.9-2
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-lme4/Makefile b/math/R-cran-lme4/Makefile
index a96f0a0c319b..5ffe485d4328 100644
--- a/math/R-cran-lme4/Makefile
+++ b/math/R-cran-lme4/Makefile
@@ -3,6 +3,7 @@
PORTNAME= lme4
DISTVERSION= 1.1-23
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-lpSolve/Makefile b/math/R-cran-lpSolve/Makefile
index 86c144083efd..9882b5176e81 100644
--- a/math/R-cran-lpSolve/Makefile
+++ b/math/R-cran-lpSolve/Makefile
@@ -2,6 +2,7 @@
PORTNAME= lpSolve
PORTVERSION= 5.6.15
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-magic/Makefile b/math/R-cran-magic/Makefile
index ab246d670aa0..1f24038eddd5 100644
--- a/math/R-cran-magic/Makefile
+++ b/math/R-cran-magic/Makefile
@@ -3,7 +3,7 @@
PORTNAME= magic
DISTVERSION= 1.5-9
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-maxLik/Makefile b/math/R-cran-maxLik/Makefile
index c1da1fda6e29..261c7fa2bea9 100644
--- a/math/R-cran-maxLik/Makefile
+++ b/math/R-cran-maxLik/Makefile
@@ -3,6 +3,7 @@
PORTNAME= maxLik
DISTVERSION= 1.3-8
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-mcmc/Makefile b/math/R-cran-mcmc/Makefile
index 42e5ee201d3d..0cc901d4d7f2 100644
--- a/math/R-cran-mcmc/Makefile
+++ b/math/R-cran-mcmc/Makefile
@@ -3,6 +3,7 @@
PORTNAME= mcmc
DISTVERSION= 0.9-7
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-memisc/Makefile b/math/R-cran-memisc/Makefile
index a85bb823b76c..fd15bc0e33b4 100644
--- a/math/R-cran-memisc/Makefile
+++ b/math/R-cran-memisc/Makefile
@@ -3,6 +3,7 @@
PORTNAME= memisc
DISTVERSION= 0.99.22
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-minqa/Makefile b/math/R-cran-minqa/Makefile
index b7869f8431fc..212b95313cf4 100644
--- a/math/R-cran-minqa/Makefile
+++ b/math/R-cran-minqa/Makefile
@@ -3,7 +3,7 @@
PORTNAME= minqa
PORTVERSION= 1.2.4
-PORTREVISION= 4
+PORTREVISION= 5
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-miscTools/Makefile b/math/R-cran-miscTools/Makefile
index 2dabb90a2731..361ab33372ea 100644
--- a/math/R-cran-miscTools/Makefile
+++ b/math/R-cran-miscTools/Makefile
@@ -3,6 +3,7 @@
PORTNAME= miscTools
DISTVERSION= 0.6-26
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-mitools/Makefile b/math/R-cran-mitools/Makefile
index 4afa458ac802..56115239a30c 100644
--- a/math/R-cran-mitools/Makefile
+++ b/math/R-cran-mitools/Makefile
@@ -2,7 +2,7 @@
PORTNAME= mitools
DISTVERSION= 2.4
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-mvtnorm/Makefile b/math/R-cran-mvtnorm/Makefile
index 2368def700b0..63efd0c7ee7a 100644
--- a/math/R-cran-mvtnorm/Makefile
+++ b/math/R-cran-mvtnorm/Makefile
@@ -3,7 +3,7 @@
PORTNAME= mvtnorm
PORTVERSION= 0.9.96
-PORTREVISION= 19
+PORTREVISION= 20
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION:C/\./-/g:C/-/./1}
diff --git a/math/R-cran-nloptr/Makefile b/math/R-cran-nloptr/Makefile
index c0ddaba522cc..60fdaa3d5ec7 100644
--- a/math/R-cran-nloptr/Makefile
+++ b/math/R-cran-nloptr/Makefile
@@ -3,6 +3,7 @@
PORTNAME= nloptr
PORTVERSION= 1.2.2.1
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-nnls/Makefile b/math/R-cran-nnls/Makefile
index e573968769b9..e43bf148a250 100644
--- a/math/R-cran-nnls/Makefile
+++ b/math/R-cran-nnls/Makefile
@@ -3,7 +3,7 @@
PORTNAME= nnls
PORTVERSION= 1.4
-PORTREVISION= 11
+PORTREVISION= 12
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-nortest/Makefile b/math/R-cran-nortest/Makefile
index 800cf449453d..dc9e98c8a3ee 100644
--- a/math/R-cran-nortest/Makefile
+++ b/math/R-cran-nortest/Makefile
@@ -3,7 +3,7 @@
PORTNAME= nortest
DISTVERSION= 1.0-4
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-numDeriv/Makefile b/math/R-cran-numDeriv/Makefile
index db753b62c125..2b982a9b6694 100644
--- a/math/R-cran-numDeriv/Makefile
+++ b/math/R-cran-numDeriv/Makefile
@@ -3,7 +3,7 @@
PORTNAME= numDeriv
DISTVERSION= 2016.8-1.1
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-numbers/Makefile b/math/R-cran-numbers/Makefile
index 939acec41c04..61edfbac5f32 100644
--- a/math/R-cran-numbers/Makefile
+++ b/math/R-cran-numbers/Makefile
@@ -2,6 +2,7 @@
PORTNAME= numbers
DISTVERSION= 0.7-5
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-outliers/Makefile b/math/R-cran-outliers/Makefile
index 9a8e49d9fda7..05eed16bbe9d 100644
--- a/math/R-cran-outliers/Makefile
+++ b/math/R-cran-outliers/Makefile
@@ -3,7 +3,7 @@
PORTNAME= outliers
PORTVERSION= 0.14
-PORTREVISION= 8
+PORTREVISION= 9
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-partitions/Makefile b/math/R-cran-partitions/Makefile
index b8eb78ed9c6a..e73468c4124e 100644
--- a/math/R-cran-partitions/Makefile
+++ b/math/R-cran-partitions/Makefile
@@ -2,6 +2,7 @@
PORTNAME= partitions
DISTVERSION= 1.9-22
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-pbkrtest/Makefile b/math/R-cran-pbkrtest/Makefile
index 9b00d0b554bb..c85737382814 100644
--- a/math/R-cran-pbkrtest/Makefile
+++ b/math/R-cran-pbkrtest/Makefile
@@ -3,6 +3,7 @@
PORTNAME= pbkrtest
DISTVERSION= 0.4-8.6
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-pls/Makefile b/math/R-cran-pls/Makefile
index 770ccf6bec71..e3192ee898f5 100644
--- a/math/R-cran-pls/Makefile
+++ b/math/R-cran-pls/Makefile
@@ -2,6 +2,7 @@
PORTNAME= pls
DISTVERSION= 2.7-2
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-polynom/Makefile b/math/R-cran-polynom/Makefile
index fb799df56db5..6af3af65cf34 100644
--- a/math/R-cran-polynom/Makefile
+++ b/math/R-cran-polynom/Makefile
@@ -2,7 +2,7 @@
PORTNAME= polynom
DISTVERSION= 1.4-0
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-prodlim/Makefile b/math/R-cran-prodlim/Makefile
index 11401c479e37..e7622f174bfc 100644
--- a/math/R-cran-prodlim/Makefile
+++ b/math/R-cran-prodlim/Makefile
@@ -3,7 +3,7 @@
PORTNAME= prodlim
PORTVERSION= 1.6.1
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-psych/Makefile b/math/R-cran-psych/Makefile
index 0a0c89759d6c..aa1bcc126108 100644
--- a/math/R-cran-psych/Makefile
+++ b/math/R-cran-psych/Makefile
@@ -3,7 +3,7 @@
PORTNAME= psych
PORTVERSION= 1.2.1
-PORTREVISION= 11
+PORTREVISION= 12
CATEGORIES= math science
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-quadprog/Makefile b/math/R-cran-quadprog/Makefile
index e19484619d7e..30407b7a327c 100644
--- a/math/R-cran-quadprog/Makefile
+++ b/math/R-cran-quadprog/Makefile
@@ -3,6 +3,7 @@
PORTNAME= quadprog
DISTVERSION= 1.5-8
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-qualityTools/Makefile b/math/R-cran-qualityTools/Makefile
index 964818fa9c4c..9e63ec997d04 100644
--- a/math/R-cran-qualityTools/Makefile
+++ b/math/R-cran-qualityTools/Makefile
@@ -3,7 +3,7 @@
PORTNAME= qualityTools
DISTVERSION= 1.55
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-quantreg/Makefile b/math/R-cran-quantreg/Makefile
index bb4750c11c9d..327d5c43ac75 100644
--- a/math/R-cran-quantreg/Makefile
+++ b/math/R-cran-quantreg/Makefile
@@ -3,6 +3,7 @@
PORTNAME= quantreg
PORTVERSION= 5.55
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-raster/Makefile b/math/R-cran-raster/Makefile
index 62568437f634..ec8d7e100d21 100644
--- a/math/R-cran-raster/Makefile
+++ b/math/R-cran-raster/Makefile
@@ -2,6 +2,7 @@
PORTNAME= raster
DISTVERSION= 3.1-5
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-recipes/Makefile b/math/R-cran-recipes/Makefile
index 46056ac6290e..db1e8fd16321 100644
--- a/math/R-cran-recipes/Makefile
+++ b/math/R-cran-recipes/Makefile
@@ -3,6 +3,7 @@
PORTNAME= recipes
PORTVERSION= 0.1.12
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-rgenoud/Makefile b/math/R-cran-rgenoud/Makefile
index a9334865caaa..be7e3ddabf9c 100644
--- a/math/R-cran-rgenoud/Makefile
+++ b/math/R-cran-rgenoud/Makefile
@@ -3,7 +3,7 @@
PORTNAME= rgenoud
DISTVERSION= 5.8-3.0
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-robustbase/Makefile b/math/R-cran-robustbase/Makefile
index 30bd40bcce54..d6dcddbc7044 100644
--- a/math/R-cran-robustbase/Makefile
+++ b/math/R-cran-robustbase/Makefile
@@ -3,6 +3,7 @@
PORTNAME= robustbase
DISTVERSION= 0.93-6
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-sandwich/Makefile b/math/R-cran-sandwich/Makefile
index 5ed76061c3d4..db80e1d695ff 100644
--- a/math/R-cran-sandwich/Makefile
+++ b/math/R-cran-sandwich/Makefile
@@ -3,7 +3,7 @@
PORTNAME= sandwich
DISTVERSION= 2.5-1
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-scatterplot3d/Makefile b/math/R-cran-scatterplot3d/Makefile
index ca6417e71216..596d9c04ed07 100644
--- a/math/R-cran-scatterplot3d/Makefile
+++ b/math/R-cran-scatterplot3d/Makefile
@@ -3,7 +3,7 @@
PORTNAME= scatterplot3d
DISTVERSION= 0.3-41
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-sets/Makefile b/math/R-cran-sets/Makefile
index fe1352ce5525..3e00bf3a54f6 100644
--- a/math/R-cran-sets/Makefile
+++ b/math/R-cran-sets/Makefile
@@ -2,6 +2,7 @@
PORTNAME= sets
DISTVERSION= 1.0-18
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-sf/Makefile b/math/R-cran-sf/Makefile
index 226d8a416668..e1fbd5e6e3d9 100644
--- a/math/R-cran-sf/Makefile
+++ b/math/R-cran-sf/Makefile
@@ -3,6 +3,7 @@
PORTNAME= sf
DISTVERSION= 0.9-2
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-sm/Makefile b/math/R-cran-sm/Makefile
index 84b6b6878bee..80e7492b3240 100644
--- a/math/R-cran-sm/Makefile
+++ b/math/R-cran-sm/Makefile
@@ -3,7 +3,7 @@
PORTNAME= sm
DISTVERSION= 2.2-5.6
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-sp/Makefile b/math/R-cran-sp/Makefile
index 12f083237b02..60fb3ff8587e 100644
--- a/math/R-cran-sp/Makefile
+++ b/math/R-cran-sp/Makefile
@@ -3,6 +3,7 @@
PORTNAME= sp
DISTVERSION= 1.4-1
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-spData/Makefile b/math/R-cran-spData/Makefile
index 00ccbeb5b916..362009d9930b 100644
--- a/math/R-cran-spData/Makefile
+++ b/math/R-cran-spData/Makefile
@@ -3,6 +3,7 @@
PORTNAME= spData
PORTVERSION= 0.3.5
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-spdep/Makefile b/math/R-cran-spdep/Makefile
index 2b035fb72c0b..3fcbc8a02973 100644
--- a/math/R-cran-spdep/Makefile
+++ b/math/R-cran-spdep/Makefile
@@ -3,6 +3,7 @@
PORTNAME= spdep
DISTVERSION= 1.1-3
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-sspir/Makefile b/math/R-cran-sspir/Makefile
index e90d6b7a68e9..ba3c8845d7f9 100644
--- a/math/R-cran-sspir/Makefile
+++ b/math/R-cran-sspir/Makefile
@@ -3,7 +3,7 @@
PORTNAME= sspir
PORTVERSION= 0.2.10
-PORTREVISION= 7
+PORTREVISION= 8
CATEGORIES= math
MASTER_SITES= http://cran.r-project.org/src/contrib/Archive/sspir/
DISTNAME= ${PORTNAME}_${PORTVERSION}
diff --git a/math/R-cran-stabledist/Makefile b/math/R-cran-stabledist/Makefile
index 2d6a8a82e533..8c6590b318ef 100644
--- a/math/R-cran-stabledist/Makefile
+++ b/math/R-cran-stabledist/Makefile
@@ -3,7 +3,7 @@
PORTNAME= stabledist
DISTVERSION= 0.7-1
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-statmod/Makefile b/math/R-cran-statmod/Makefile
index b5f376909ff6..79a623c8b951 100644
--- a/math/R-cran-statmod/Makefile
+++ b/math/R-cran-statmod/Makefile
@@ -2,6 +2,7 @@
PORTNAME= statmod
DISTVERSION= 1.4.33
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-survey/Makefile b/math/R-cran-survey/Makefile
index f9a5477369d9..98b65bae0e0f 100644
--- a/math/R-cran-survey/Makefile
+++ b/math/R-cran-survey/Makefile
@@ -3,6 +3,7 @@
PORTNAME= survey
DISTVERSION= 4.0
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-truncnorm/Makefile b/math/R-cran-truncnorm/Makefile
index 7910be0c46bf..9bbe59ce304e 100644
--- a/math/R-cran-truncnorm/Makefile
+++ b/math/R-cran-truncnorm/Makefile
@@ -2,7 +2,7 @@
# $FreeBSD$
PORTNAME= truncnorm
-PORTREVISION= 4
+PORTREVISION= 5
DISTVERSION= 1.0-8
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-units/Makefile b/math/R-cran-units/Makefile
index 0b7954d6e0a8..31e476d115a6 100644
--- a/math/R-cran-units/Makefile
+++ b/math/R-cran-units/Makefile
@@ -3,6 +3,7 @@
PORTNAME= units
DISTVERSION= 0.6-6
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-uroot/Makefile b/math/R-cran-uroot/Makefile
index 7f59caf55807..1051d8abcbe4 100644
--- a/math/R-cran-uroot/Makefile
+++ b/math/R-cran-uroot/Makefile
@@ -3,6 +3,7 @@
PORTNAME= uroot
DISTVERSION= 2.1-0
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-xts/Makefile b/math/R-cran-xts/Makefile
index 7640295c5ac1..d9237a3bfd1a 100644
--- a/math/R-cran-xts/Makefile
+++ b/math/R-cran-xts/Makefile
@@ -3,6 +3,7 @@
PORTNAME= xts
DISTVERSION= 0.12-0
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R-cran-zoo/Makefile b/math/R-cran-zoo/Makefile
index 83e219d184bc..9e7ceff16e61 100644
--- a/math/R-cran-zoo/Makefile
+++ b/math/R-cran-zoo/Makefile
@@ -3,6 +3,7 @@
PORTNAME= zoo
DISTVERSION= 1.8-8
+PORTREVISION= 1
CATEGORIES= math
DISTNAME= ${PORTNAME}_${DISTVERSION}
diff --git a/math/R/Makefile b/math/R/Makefile
index a4de6c6f8d70..e2939d71c63b 100644
--- a/math/R/Makefile
+++ b/math/R/Makefile
@@ -2,8 +2,7 @@
# $FreeBSD$
PORTNAME= R
-DISTVERSION= 3.6.3
-PORTREVISION= 2
+DISTVERSION= 4.0.0
CATEGORIES= math lang
MASTER_SITES= CRAN/src/base/R-${PORTVERSION:C|\..*||}
@@ -16,7 +15,7 @@ ONLY_FOR_ARCHS= aarch64 amd64 armv6 armv7 i386 powerpc64
BUILD_DEPENDS= texi2any:print/texinfo
LIB_DEPENDS= libcurl.so:ftp/curl \
- libpcre.so:devel/pcre
+ libpcre2-8.so:devel/pcre2
RUN_DEPENDS= gmake:devel/gmake # R packages may require GNU make
# possible TODO
@@ -36,7 +35,7 @@ CONFIGURE_ARGS= --disable-java \
--with-readline \
rdocdir=${DOCSDIR}
INSTALL_TARGET= install-strip
-PLIST_SUB= LIBVER=${_LIBVER}
+PLIST_SUB= FULLVER=${DISTVERSION} MAJORVER=${_MAJORVER}
OPTIONS_DEFINE= ICU INFO LDOUBLE LETTER MEMPROF NLS RPROF X11
OPTIONS_DEFINE_amd64= FLANG OPENMP
@@ -102,11 +101,11 @@ OPENMP_CONFIGURE_ENABLE= openmp
PNG_IMPLIES= X11
PNG_LIB_DEPENDS= libpng.so:graphics/png
PNG_CONFIGURE_WITH= libpng
-RBLAS_CONFIGURE_OFF= --with-blas="-L${LOCALBASE}/lib ${BLASLIB}" \
- --with-lapack="${LAPACKLIB}"
RBLAS_CONFIGURE_ON= --enable-BLAS-shlib \
--without-blas \
--without-lapack
+RBLAS_CONFIGURE_OFF= --with-blas="-L${LOCALBASE}/lib ${BLASLIB}" \
+ --with-lapack="${LAPACKLIB}"
RBLAS_EXTRA_PATCHES= ${PATCHDIR}/extra-patch-src_extra_blas_Makefile.in \
${PATCHDIR}/extra-patch-src_modules_lapack_Makefile.in
RPROF_CONFIGURE_ENABLE= R-profiling
@@ -125,7 +124,7 @@ X11_USES= xorg
X11_USE= XORG=ice,sm,x11,xext,xmu,xscrnsaver,xt
X11_CONFIGURE_WITH= x
-_LIBVER= ${PORTVERSION:R}
+_MAJORVER= ${DISTVERSION:R:R}
.include <bsd.port.options.mk>
@@ -135,7 +134,9 @@ USES+= fortran
post-patch:
@${REINPLACE_CMD} -e "s|/usr/local|${LOCALBASE}|g" ${WRKSRC}/configure
- @${REINPLACE_CMD} "s|%%LIBVER%%|${_LIBVER}|" \
+ @${REINPLACE_CMD} \
+ -e "s|%%FULLVER%%|${DISTVERSION}|" \
+ -e "s|%%MAJORVER%%|${_MAJORVER}|" \
${WRKSRC}/src/main/Makefile.in \
${WRKSRC}/src/extra/blas/Makefile.in \
${WRKSRC}/src/modules/lapack/Makefile.in
diff --git a/math/R/distinfo b/math/R/distinfo
index ed5d68ec3cf1..ee608eeec8f1 100644
--- a/math/R/distinfo
+++ b/math/R/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1583078198
-SHA256 (R-3.6.3.tar.gz) = 89302990d8e8add536e12125ec591d6951022cf8475861b3690bc8bf1cefaa8f
-SIZE (R-3.6.3.tar.gz) = 33308185
+TIMESTAMP = 1587776044
+SHA256 (R-4.0.0.tar.gz) = 06beb0291b569978484eb0dcb5d2339665ec745737bdfb4e873e7a5a75492940
+SIZE (R-4.0.0.tar.gz) = 33173947
diff --git a/math/R/files/extra-patch-src_extra_blas_Makefile.in b/math/R/files/extra-patch-src_extra_blas_Makefile.in
index 44f76531aa3b..07e097e92725 100644
--- a/math/R/files/extra-patch-src_extra_blas_Makefile.in
+++ b/math/R/files/extra-patch-src_extra_blas_Makefile.in
@@ -1,27 +1,34 @@
---- src/extra/blas/Makefile.in.orig 2018-04-24 11:01:59 UTC
+--- src/extra/blas/Makefile.in.orig 2020-05-05 02:47:09 UTC
+++ src/extra/blas/Makefile.in
-@@ -19,7 +19,7 @@ SOURCES = blas00.c blas.f cmplxblas.f
- Rblas_la = libRblas$(R_DYLIB_EXT)
+@@ -16,11 +16,11 @@ ALL_FFLAGS = $(ALL_FFLAGS_LO)
+
+ SOURCES = blas00.c blas.f cmplxblas.f
+
+-@BUILD_LTO_CHECK_FALSE@Rblas_la = libRblas$(R_DYLIB_EXT)
++@BUILD_LTO_CHECK_FALSE@Rblas_la = libRblas$(R_DYLIB_EXT).%%FULLVER%%
+ @BUILD_LTO_CHECK_TRUE@Rblas_la = libRblas.a
## @RBLAS_LDFLAGS@ is used on macOS
## first for internal BLAS
-Rblas_la_LIBADD = @RBLAS_LDFLAGS@ $(FLIBS_IN_SO)
-+Rblas_la_LIBADD = -Wl,-soname,libRblas.so.%%LIBVER%% $(FLIBS_IN_SO)
++Rblas_la_LIBADD = -Wl,-soname,libRblas.so.%%MAJORVER%% $(FLIBS_IN_SO)
## then external one
Rblas_la_LIBADD0 = @RBLAS_LDFLAGS@
-@@ -43,6 +43,7 @@ Rblas_install: $(Rblas_la)
+@@ -45,6 +45,8 @@ Rblas_install: $(Rblas_la)
@$(MKINSTALLDIRS) "$(DESTDIR)$(Rexeclibdir)"
@$(SHELL) $(top_srcdir)/tools/copy-if-change $(Rblas_la) \
"$(DESTDIR)$(Rexeclibdir)/$(Rblas_la)"
-+ @cd $(DESTDIR)$(Rexeclibdir) && ln -s $(Rblas_la) $(Rblas_la).%%LIBVER%%
++ @cd $(DESTDIR)$(Rexeclibdir) && ln -s $(Rblas_la) libRblas.so.%%MAJORVER%%
++ @cd $(DESTDIR)$(Rexeclibdir) && ln -s $(Rblas_la) libRblas.so
Rblas_install-strip: $(Rblas_la)
@$(MKINSTALLDIRS) "$(DESTDIR)$(Rexeclibdir)"
-@@ -50,6 +51,7 @@ Rblas_install-strip: $(Rblas_la)
- @if test -n "$(STRIP_LIBS)"; then \
- $(STRIP_LIBS) "$(DESTDIR)$(Rexeclibdir)/$(Rblas_la)" ;\
+@@ -52,6 +54,8 @@ Rblas_install-strip: $(Rblas_la)
+ @if test -n "$(STRIP_SHARED_LIB)"; then \
+ $(STRIP_SHARED_LIB) "$(DESTDIR)$(Rexeclibdir)/$(Rblas_la)" ;\
fi
-+ @cd "$(DESTDIR)$(Rexeclibdir)" && ln -s $(Rblas_la) $(Rblas_la).%%LIBVER%%
++ @cd $(DESTDIR)$(Rexeclibdir) && ln -s $(Rblas_la) libRblas.so.%%MAJORVER%%
++ @cd $(DESTDIR)$(Rexeclibdir) && ln -s $(Rblas_la) libRblas.so
mostlyclean: clean
clean:
diff --git a/math/R/files/extra-patch-src_modules_lapack_Makefile.in b/math/R/files/extra-patch-src_modules_lapack_Makefile.in
index c35cbd1ab0b3..3d9f84cb4fbe 100644
--- a/math/R/files/extra-patch-src_modules_lapack_Makefile.in
+++ b/math/R/files/extra-patch-src_modules_lapack_Makefile.in
@@ -1,31 +1,43 @@
---- src/modules/lapack/Makefile.in.orig 2018-04-24 11:09:56 UTC
+--- src/modules/lapack/Makefile.in.orig 2020-05-05 03:51:08 UTC
+++ src/modules/lapack/Makefile.in
-@@ -83,16 +83,18 @@ $(lapack_la): $(lapack_la_OBJECTS)
+@@ -41,7 +41,7 @@ lapack_la_OBJECTS = $(OBJECTS)
+ lapack_la_LDFLAGS = @LAPACK_LDFLAGS@
+ lapack_la_LIBADD = $(LIBR1) @DYLIB_UNDEFINED_ALLOWED_FALSE@ $(LIBINTL)
+
+-@BUILD_LTO_CHECK_FALSE@Rlapack_la = libRlapack$(R_DYLIB_EXT)
++@BUILD_LTO_CHECK_FALSE@Rlapack_la = libRlapack$(R_DYLIB_EXT).%%FULLVER%%
+ @BUILD_LTO_CHECK_TRUE@Rlapack_la = libRlapack.a
+ Rlapack_la_OBJECTS = $(LIBOBJECTS)
+ ## This used to skip FLIBS, but that relied on all the functions
+@@ -87,17 +87,21 @@ $(lapack_la): $(lapack_la_OBJECTS)
## Include BLAS here, as with (static) ATLAS that pulls all the
## BLAS routines into one place.
$(Rlapack_la): $(LIBOBJECTS)
-- $(DYLIB_LINK) -o $@ $(LIBOBJECTS) @RLAPACK_LDFLAGS@ @BLAS_LIBS@ $(Rlapack_la_LIBADD)
-+ $(DYLIB_LINK) -o $@ $(LIBOBJECTS) -Wl,-soname,libRlapack.so.%%LIBVER%% @BLAS_LIBS@ $(Rlapack_la_LIBADD)
+- @BUILD_LTO_CHECK_FALSE@$(DYLIB_LINK) -o $@ $(LIBOBJECTS) @RLAPACK_LDFLAGS@ @BLAS_LIBS@ $(Rlapack_la_LIBADD)
++ @BUILD_LTO_CHECK_FALSE@$(DYLIB_LINK) -o $@ $(LIBOBJECTS) -Wl,-soname,libRlapack.so.%%MAJORVER%% @BLAS_LIBS@ $(Rlapack_la_LIBADD)
+ @BUILD_LTO_CHECK_TRUE@$(AR) -cr $@ $(LIBOBJECTS)
Rlapack_install: $(Rlapack_la)
@$(MKINSTALLDIRS) "$(DESTDIR)$(Rexeclibdir)"
@$(SHELL) $(top_srcdir)/tools/copy-if-change $(Rlapack_la) \
"$(Rexeclibdir)/$(Rlapack_la)"
-+ @cd $(Rexeclibdir) && ln -s $(Rlapack_la) $(Rlapack_la).%%LIBVER%%
++ @cd $(DESTDIR)$(Rexeclibdir) && ln -s $(Rlapack_la) libRlapack.so.%%MAJORVER%%
++ @cd $(DESTDIR)$(Rexeclibdir) && ln -s $(Rlapack_la) libRlapack.so
install: installdirs
@$(SHELL) $(top_srcdir)/tools/copy-if-change $(lapack_la) "$(DESTDIR)$(Rexecmodulesdir)/$(lapack_la)"
--@USE_EXTERNAL_LAPACK_FALSE@ @$(SHELL) $(top_srcdir)/tools/copy-if-change $(Rlapack_la) "$(DESTDIR)$(Rexeclibdir)/$(Rlapack_la)"
-+@USE_EXTERNAL_LAPACK_FALSE@ @cd "$(DESTDIR)$(Rexeclibdir)" && ln -sf $(Rlapack_la) $(Rlapack_la).%%LIBVER%%
-+
+ @USE_EXTERNAL_LAPACK_FALSE@ @$(SHELL) $(top_srcdir)/tools/copy-if-change $(Rlapack_la) "$(DESTDIR)$(Rexeclibdir)/$(Rlapack_la)"
++@USE_EXTERNAL_LAPACK_FALSE@ @cd "$(DESTDIR)$(Rexeclibdir)" && ln -sf $(Rlapack_la) libRlapack.so.%%MAJORVER%%
++@USE_EXTERNAL_LAPACK_FALSE@ @cd "$(DESTDIR)$(Rexeclibdir)" && ln -sf $(Rlapack_la) libRlapack.so
installdirs:
@$(MKINSTALLDIRS) "$(DESTDIR)$(Rexecmodulesdir)"
install-strip-Rlapack:
-@@ -105,6 +107,7 @@ install-strip: @USE_EXTERNAL_LAPACK_FALS
- @if test -n "$(STRIP_LIBS)"; then \
- $(STRIP_LIBS) "$(DESTDIR)$(Rexecmodulesdir)/$(lapack_la)"; \
+@@ -110,6 +114,8 @@ install-strip: @USE_EXTERNAL_LAPACK_FALSE@ install-str
+ @if test -n "$(STRIP_SHARED_LIB)"; then \
+ $(STRIP_SHARED_LIB) "$(DESTDIR)$(Rexecmodulesdir)/$(lapack_la)"; \
fi
-+ @cd "$(DESTDIR)$(Rexeclibdir)" && ln -s $(Rlapack_la) $(Rlapack_la).%%LIBVER%%
++ @cd $(DESTDIR)$(Rexeclibdir) && ln -s $(Rlapack_la) libRlapack.so.%%MAJORVER%%
++ @cd $(DESTDIR)$(Rexeclibdir) && ln -s $(Rlapack_la) libRlapack.so
uninstall:
@rm -f "$(Rexecmodulesdir)/$(lapack_la)"
diff --git a/math/R/files/patch-src_main_Makefile.in b/math/R/files/patch-src_main_Makefile.in
index b922f8c88ff0..ddc961a8ac69 100644
--- a/math/R/files/patch-src_main_Makefile.in
+++ b/math/R/files/patch-src_main_Makefile.in
@@ -1,19 +1,27 @@
---- src/main/Makefile.in.orig 2017-07-16 08:46:49 UTC
+--- src/main/Makefile.in.orig 2020-05-05 02:47:09 UTC
+++ src/main/Makefile.in
-@@ -110,7 +110,7 @@ libR_la_LIBADD = $(MAIN_OBJS) $(EXTRA_STATIC_LIBS) $(
+@@ -105,13 +105,13 @@ R_bin_OBJECTS = Rmain.o @WANT_R_SHLIB_FALSE@$(OBJECTS)
+ @WANT_R_SHLIB_TRUE@R_bin_LDADD = -lR @BLAS_SHLIB_TRUE@-lRblas
+ @BUILD_LTO_FALSE@R_bin_DEPENDENCIES =@WANT_R_SHLIB_FALSE@ libR.a @USE_EXPORTFILES_TRUE@ $(top_builddir)/etc/R.exp
+
+-libR_la = libR$(R_DYLIB_EXT)
++libR_la = libR$(R_DYLIB_EXT).%%FULLVER%%
+ libR_la_OBJECTS = $(OBJECTS)
+ libR_la_LIBADD = $(MAIN_OBJS) $(EXTRA_STATIC_LIBS) $(EXTRA_LIBS) @WANT_R_SHLIB_TRUE@ @USE_EXPORTFILES_TRUE@ -Wl,-bE:$(top_builddir)/etc/R.exp
libR_la_DEPENDENCIES = $(STATIC_LIBS) $(R_TZONE) @WANT_R_SHLIB_TRUE@ @USE_EXPORTFILES_TRUE@ $(top_builddir)/etc/R.exp
## The next is needed for macOS only at present
-LIBR_LDFLAGS = @LIBR_LDFLAGS@
-+LIBR_LDFLAGS = -Wl,-soname,libR.so.%%LIBVER%%
++LIBR_LDFLAGS = -Wl,-soname,libR.so.4
all: R
-@@ -200,6 +200,7 @@ install-bin: installdirs
+@@ -201,6 +201,8 @@ install-bin: installdirs
install-lib: installdirs
@$(MKINSTALLDIRS) "$(DESTDIR)$(Rexeclibdir)"
@$(SHELL) $(top_srcdir)/tools/copy-if-change $(libR_la) "$(DESTDIR)$(Rexeclibdir)/$(libR_la)"
-+ @cd "$(DESTDIR)$(Rexeclibdir)" && ln -s $(libR_la) $(libR_la).%%LIBVER%%
++ @cd "$(DESTDIR)$(Rexeclibdir)" && ln -s $(libR_la) libR.so.%%MAJORVER%%
++ @cd "$(DESTDIR)$(Rexeclibdir)" && ln -s $(libR_la) libR.so
install-static: installdirs
@$(MKINSTALLDIRS) "$(DESTDIR)$(Rexeclibdir)"
@$(SHELL) $(top_srcdir)/tools/copy-if-change libR.a "$(DESTDIR)$(Rexeclibdir)/libR.a"
diff --git a/math/R/pkg-plist b/math/R/pkg-plist
index 023d21896d7f..1450a4bc2229 100644
--- a/math/R/pkg-plist
+++ b/math/R/pkg-plist
@@ -76,11 +76,14 @@ lib/R/include/Rmath.h
lib/R/include/Rversion.h
lib/R/include/S.h
lib/R/lib/libR.so
-lib/R/lib/libR.so.%%LIBVER%%
+lib/R/lib/libR.so.%%FULLVER%%
+lib/R/lib/libR.so.%%MAJORVER%%
%%RBLAS%%lib/R/lib/libRblas.so
-%%RBLAS%%lib/R/lib/libRblas.so.%%LIBVER%%
+%%RBLAS%%lib/R/lib/libRblas.so.%%FULLVER%%
+%%RBLAS%%lib/R/lib/libRblas.so.%%MAJORVER%%
%%RBLAS%%lib/R/lib/libRlapack.so
-%%RBLAS%%lib/R/lib/libRlapack.so.%%LIBVER%%
+%%RBLAS%%lib/R/lib/libRlapack.so.%%FULLVER%%
+%%RBLAS%%lib/R/lib/libRlapack.so.%%MAJORVER%%
lib/R/library/KernSmooth/DESCRIPTION
lib/R/library/KernSmooth/INDEX
lib/R/library/KernSmooth/Meta/Rd.rds
@@ -311,6 +314,7 @@ lib/R/library/class/libs/class.so
%%NLS%%lib/R/library/class/po/de/LC_MESSAGES/R-class.mo
%%NLS%%lib/R/library/class/po/en@quot/LC_MESSAGES/R-class.mo
%%NLS%%lib/R/library/class/po/fr/LC_MESSAGES/R-class.mo
+%%NLS%%lib/R/library/class/po/it/LC_MESSAGES/R-class.mo
%%NLS%%lib/R/library/class/po/ko/LC_MESSAGES/R-class.mo
%%NLS%%lib/R/library/class/po/pl/LC_MESSAGES/R-class.mo
lib/R/library/cluster/CITATION
diff --git a/math/ess/Makefile b/math/ess/Makefile
index 4bc1c8dafb92..44b0dd99803e 100644
--- a/math/ess/Makefile
+++ b/math/ess/Makefile
@@ -3,7 +3,7 @@
PORTNAME= ess
DISTVERSION= 18.10.2
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
MASTER_SITES= http://ess.r-project.org/downloads/ess/ \
http://stat.ethz.ch/ESS/downloads/ess/
diff --git a/math/p5-Statistics-R/Makefile b/math/p5-Statistics-R/Makefile
index 9f0adedf93c6..44fe4b73a849 100644
--- a/math/p5-Statistics-R/Makefile
+++ b/math/p5-Statistics-R/Makefile
@@ -3,7 +3,7 @@
PORTNAME= Statistics-R
PORTVERSION= 0.34
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math perl5
MASTER_SITES= CPAN
MASTER_SITE_SUBDIR= CPAN:FANGLY
diff --git a/math/rkward-kde/Makefile b/math/rkward-kde/Makefile
index d20ae5d55e0a..946fac26436c 100644
--- a/math/rkward-kde/Makefile
+++ b/math/rkward-kde/Makefile
@@ -3,6 +3,7 @@
PORTNAME= rkward
PORTVERSION= 0.7.1
+PORTREVISION= 1
CATEGORIES= math
MASTER_SITES= KDE/stable/${PORTNAME}/${DISTVERSION:C/b//}/src
PKGNAMESUFFIX= -kde