Remove non staged ports without pending PR from ma*

11 files changed, 0 insertions, 628 deletions

diff --git a/math/atlas-devel/Makefile b/math/atlas-devel/Makefile
deleted file mode 100644
index 29ab29a710b0..000000000000
--- a/math/atlas-devel/Makefile
+++ /dev/null
@@ -1,265 +0,0 @@
-# Created by: Nakata Maho <maho@FreeBSD.org>
-# $FreeBSD$
-
-PORTNAME=	atlas
-PORTVERSION=	3.9.11
-PORTREVISION=	3
-CATEGORIES=	math
-MASTER_SITES=	SF/math-${PORTNAME}/Developer%20%28unstable%29/${PORTVERSION}
-PKGNAMESUFFIX=	-devel
-DISTNAME=	${PORTNAME}${PORTVERSION}
-
-MAINTAINER=	ports@FreeBSD.org
-COMMENT=	Development version of math/atlas
-
-IGNORE=		: dependent ports have been altered to link with math/atlas -- please\
-use that port instead of math/atlas-devel, while the latter is being revised
-MANUAL_PACKAGE_BUILD=	Optimizes for the local machine.
-
-USES=		fortran gmake tar:bzip2
-USE_GCC=	yes
-WRKSRC=		${WRKDIR}/ATLAS
-USE_LDCONFIG=	yes
-CONFLICTS=	atlas-[0-9]* cblas-[0-9]*
-
-NO_STAGE=	yes
-.include <bsd.port.pre.mk>
-
-NOT_FOR_ARCHS=	alpha
-
-CCOMPILER=	${CC}
-LIB_DEPENDS+=	libblas.so:${PORTSDIR}/math/blas
-LIB_DEPENDS+=	liblapack.so:${PORTSDIR}/math/lapack
-
-.if ${ARCH} == "sparc64"
-PICFLAG?=	-fPIC
-.else
-PICFLAG?=	-fpic
-.endif
-
-.if ${ARCH} == "i386"
-POINTER=	32
-.endif
-.if ${ARCH} == "amd64"
-POINTER=	64
-.endif
-.if ${ARCH} == "sparc64"
-POINTER=	64
-.endif
-
-.if (${OSVERSION} < 700000) && defined(WITH_GCC42KERNEL)
-BUILD_DEPENDS+=	gcc42:${PORTSDIR}/lang/gcc42
-KERNELFLAG=	-Ss kern gcc42
-.else
-KERNELFLAG=	""
-.endif
-
-.if defined(WITH_WALL_TIMER)
-.  if defined(MHZ) && ( ${ARCH} == "i386" || ${ARCH} == "amd64" )
-TIMEFLAG=	-D c -DPentiumCPS=${MHZ}
-.  else
-TIMEFLAG=	-D c -DWALL
-.  endif
-.else
-TIMEFLAG=	""
-.endif
-
-# only used for lapack sub-project
-.if defined(WITH_OPTIMIZED_FLAGS)
-.if defined(CPUTYPE)
-FFLAGS+=	-march=${CPUTYPE} -pipe -O2 -ffast-math
-.else
-FFLAGS+=	-pipe -O2 -ffast-math
-.endif
-.endif
-.if defined(WITH_STATICLIB)
-PLIST_SUB+=	WITH_STATICLIB=""
-.else
-PLIST_SUB+=	WITH_STATICLIB="@comment "
-.endif
-
-post-extract:
-	@${ECHO_MSG} 'This port engages in a long, computationally-demanding tuning process.'
-	@${ECHO_MSG} 'Builds can take a day or more on older hardware, and temporarily occupy'
-	@${ECHO_MSG} 'several hundred megabytes of disk space.  You are advised to disable'
-	@${ECHO_MSG} 'all forms of power management or CPU throttling (APM, ACPI, Intel'
-	@${ECHO_MSG} 'SpeedStep, AMD PowerNow, AMD Cool and Quiet, p4tcc, powerd, etc.)'
-	@${ECHO_MSG} 'that may change the disk I/O or CPU behavior during the build, and'
-	@${ECHO_MSG} 'to set operating parameters to static values at which you ultimately'
-	@${ECHO_MSG} 'intend to use the software.  You should also avoid placing heavy loads'
-	@${ECHO_MSG} 'on the system during the build, and temporarily disable any automatons'
-	@${ECHO_MSG} 'that may do so.  If you fail to follow these guidelines, you may prolong'
-	@${ECHO_MSG} 'the build, perhaps indefinitely, and you may obtain libraries with'
-	@${ECHO_MSG} 'sub-optimal performance.'
-	@${ECHO_MSG}
-	@${ECHO_MSG} 'Occasionally the autoconfiguration may fail for certain platforms, and'
-	@${ECHO_MSG} 'you may have to override the architecture, compiler flags, assembly'
-	@${ECHO_MSG} 'language dialect, or pointer bit-width by issuing additional configure'
-	@${ECHO_MSG} 'arguments.  Consult the FAQ, installation guide, and errata page at'
-	@${ECHO_MSG} 'the project website for help if this is necessary, and notify the'
-	@${ECHO_MSG} 'port maintainer.'
-	@${ECHO_MSG}
-	@${ECHO_MSG} "This port purposely ignores the CC and CFLAGS settings"
-	@${ECHO_MSG} "Program and compiler flags are fine-tuned to the gcc 4.2.x"
-	@${ECHO_MSG} "compiler, although other gcc versions may be used; gcc 4.1.x"
-	@${ECHO_MSG} "is NOT recommended"
-	@${ECHO_MSG}
-.if !defined(WITH_STATICLIB)
-	@${ECHO_MSG} "You can build static libraries with"
-	@${ECHO_MSG} "make -DWITH_STATICLIB"
-	@${ECHO_MSG}
-.endif
-.if !defined(WITH_WALL_TIMER)
-	@${ECHO_MSG} "If your machine will be solely dedicated to"
-	@${ECHO_MSG} "building atlas with gcc during the lengthy optimization"
-	@${ECHO_MSG} "process, and not subjected to other loads, you"
-	@${ECHO_MSG} "may enable the more accurate wall timer (instead of"
-	@${ECHO_MSG} "the default CPU-time timer) with make -DWITH_WALL_TIMER"
-	@${ECHO_MSG} "If, in addition, you are on i386 or amd64, you may set MHZ"
-	@${ECHO_MSG} "to your CPU clock frequency in MHz (rounded to the nearest"
-	@${ECHO_MSG} "integer value) in the build environment for cycle-to-time"
-	@${ECHO_MSG} "conversion"
-	@${ECHO_MSG}
-.endif
-.if (${OSVERSION} < 700000)
-.if !defined(WITH_GCC42KERNEL)
-	@${ECHO_MSG} "If you don't want to make gcc 4.2.x your default compiler (CC),"
-	@${ECHO_MSG} "but you want to have ATLAS use it to compile all the kernel"
-	@${ECHO_MSG} "routines (this usually results in superior performance, and a"
-	@${ECHO_MSG} "slightly faster build), while compiling interface routines and"
-	@${ECHO_MSG} "doing any linking with gcc 3.x, make a hybrid build with"
-	@${ECHO_MSG} "make -DWITH_GCC42KERNEL"
-	@${ECHO_MSG}
-.endif
-.endif
-
-pre-configure:
-	@${REINPLACE_CMD} -e "s|%%CC%%|${CCOMPILER}|g" \
-		-e "s|%%FC%%|${FC}|g"  ${WRKSRC}/CONFIG/src/atlcomp.txt
-	@${REINPLACE_CMD} -e "s|%%PTHREAD_LIBS%%|${PTHREAD_LIBS}|g" \
-			  -e "s|%%PTHREAD_CFLAGS%%|${PTHREAD_CFLAGS}|g" \
-			  -e "s|%%LOCALBASE%%|${LOCALBASE}|g" \
-		${WRKSRC}/CONFIG/src/SpewMakeInc.c
-
-do-configure:
-#non-threaded
-#dummy f77lib, it is not used.
-	${MKDIR} ${WRKSRC}/NON_THREADED ; cd ${WRKSRC}/NON_THREADED ; \
-		../configure -v 2 -t 0 ${TIMEFLAG} -b ${POINTER} -Si cputhrchk 0 ${KERNELFLAG} -Ss f77lib " "
-	${MKDIR} ${WRKSRC}/NON_THREADED_PIC ; cd ${WRKSRC}/NON_THREADED_PIC ; \
-		../configure -v 2 -t 0 -b ${POINTER} -Fa alg '${PICFLAG} -DPIC' ${TIMEFLAG} -Si cputhrchk 0 ${KERNELFLAG} -Ss f77lib " "
-#threaded
-#dummy f77lib, it is not used.
-	cd ${WRKSRC}; ${PATCH} < ${FILESDIR}/thread-patch
-	${MKDIR} ${WRKSRC}/THREADED ; cd ${WRKSRC}/THREADED ; \
-		../configure -v 2 -b ${POINTER} -Fa alg '${PTHREAD_CFLAGS} ' ${TIMEFLAG} -Si cputhrchk 0 ${KERNELFLAG} -Ss f77lib " "
-	${MKDIR} ${WRKSRC}/THREADED_PIC ; cd ${WRKSRC}/THREADED_PIC ; \
-		../configure -v 2 -b ${POINTER} -Fa alg '${PTHREAD_CFLAGS} ${PICFLAG} -DPIC' ${TIMEFLAG} -Si cputhrchk 0 ${KERNELFLAG} -Ss f77lib " "
-
-do-build:
-# make lapack
-.if ! exists(${WRKDIR}/lapack/Makefile)
-	@${ECHO_MSG} "===>  Extracting lapack sub project"
-	@${MKDIR} ${WRKDIR}/lapack
-	@${CP} -r ${PORTSDIR}/math/lapack/files ${WRKDIR}/lapack
-	@${CP} ${PORTSDIR}/math/lapack/Makefile ${WRKDIR}/lapack
-	@${CP} ${PORTSDIR}/math/lapack/distinfo ${WRKDIR}/lapack
-	@${CP} ${PORTSDIR}/math/lapack/pkg-descr ${WRKDIR}/lapack
-	@cd ${WRKDIR}/lapack ; ${MAKE} "FFLAGS=${FFLAGS}" FC="${FC}" build WRKDIRPREFIX=""
-.endif
-.if defined(WITH_STATICLIB)
-	(cd ${WRKSRC}/NON_THREADED ; ${MAKE})
-	(cd ${WRKSRC}/THREADED ; ${MAKE})
-.endif
-	(cd ${WRKSRC}/NON_THREADED_PIC ; ${MAKE})
-	(cd ${WRKSRC}/THREADED_PIC ; ${MAKE})
-test:
-	@${MAKE} do-test
-
-ATLAS_LIBS1=libalapack libatlas libcblas libf77blas #libtstatlas
-ATLAS_LIBS2=libptcblas libptf77blas
-LAPACKWRKSRC=`cd ${WRKDIR}/lapack; ${MAKE} -V WRKSRC WRKDIRPREFIX=""`
-
-post-build:
-.if defined(WITH_STATICLIB)
-# make atlas-enhanced lapack (static ver)
-	(cd ${WRKSRC}; ${MKDIR} tmp1 ; \
-		${CP} ${LAPACKWRKSRC}/liblapack.a tmp1 ;\
-		cd tmp1 ;\
-		ar x liblapack.a ;\
-		ar x ../NON_THREADED/lib/liblapack.a ;\
-		ar r ../NON_THREADED/lib/libalapack.a *.o ;\
-		ranlib ../NON_THREADED/lib/libalapack.a )
-#  make atlas-enhanced lapack (static and thread-safe ver)
-	(cd ${WRKSRC}; ${MKDIR} tmp2 ; \
-		${CP} ${LAPACKWRKSRC}/liblapack.a tmp2 ;\
-		cd tmp2 ;\
-		ar x liblapack.a ;\
-		ar x ../THREADED/lib/liblapack.a ;\
-		ar r ../THREADED/lib/libalapack.a *.o ;\
-		ranlib ../THREADED/lib/libalapack.a )
-.endif
-# make atlas-enhanced lapack (shared ver)
-	( cd ${WRKSRC}; ${MKDIR} tmp3 ;\
-		${CP} ${LAPACKWRKSRC}_shared/liblapack.a tmp3 ;\
-		cd tmp3 ;\
-		ar x liblapack.a ;\
-		ar x ../NON_THREADED_PIC/lib/liblapack.a ;\
-		ar r ../NON_THREADED_PIC/lib/libalapack.a *.o ;\
-		ranlib ../NON_THREADED_PIC/lib/libalapack.a )
-# make atlas-enhanced lapack (shared and thread-safe ver)
-	( cd ${WRKSRC}; ${MKDIR} tmp4 ;\
-		${CP} ${LAPACKWRKSRC}_shared/liblapack.a tmp4 ;\
-		cd tmp4 ;\
-		ar x liblapack.a ;\
-		ar x ../THREADED_PIC/lib/liblapack.a ;\
-		ar r ../THREADED_PIC/lib/libalapack.a *.o ;\
-		ranlib ../THREADED_PIC/lib/libalapack.a )
-
-# make atlas shared library
-.for i in ${ATLAS_LIBS1}
-	( cd ${WRKSRC}/NON_THREADED_PIC/lib ; \
-		ld -Bshareable -o ${i}.so.2 -x -soname ${i}.so.2 --whole-archive ${i}.a )
-.endfor
-
-# make atlas shared (thread-safe) library
-.for i in ${ATLAS_LIBS1}
-	( cd ${WRKSRC}/THREADED_PIC/lib ; \
-		ld -Bshareable -o ${i}_r.so.2 -x -soname ${i}_r.so.2 --whole-archive ${i}.a )
-.endfor
-.for i in ${ATLAS_LIBS2}
-	( cd ${WRKSRC}/THREADED_PIC/lib ; \
-		ld -Bshareable -o ${i}.so.2 -x -soname ${i}.so.2 --whole-archive ${i}.a )
-.endfor
-do-install:
-.for i in ${ATLAS_LIBS1}
-.if defined(WITH_STATICLIB)
-	@${INSTALL_DATA} ${WRKSRC}/NON_THREADED/lib/${i}.a       ${PREFIX}/lib
-.endif
-	@${INSTALL_DATA} ${WRKSRC}/NON_THREADED_PIC/lib/${i}.so.2    ${PREFIX}/lib
-	@${LN} -sf ${i}.so.2 ${PREFIX}/lib/${i}.so
-.endfor
-.for i in ${ATLAS_LIBS1}
-.if defined(WITH_STATICLIB)
-	@${INSTALL_DATA} ${WRKSRC}/THREADED/lib/${i}.a       ${PREFIX}/lib/${i}_r.a
-.endif
-	@${INSTALL_DATA} ${WRKSRC}/THREADED_PIC/lib/${i}_r.so.2    ${PREFIX}/lib/${i}_r.so.2
-	@${LN} -sf ${i}_r.so.2 ${PREFIX}/lib/${i}_r.so
-.endfor
-.for i in ${ATLAS_LIBS2}
-.if defined(WITH_STATICLIB)
-	@${INSTALL_DATA} ${WRKSRC}/THREADED/lib/${i}.a       ${PREFIX}/lib
-.endif
-	@${INSTALL_DATA} ${WRKSRC}/THREADED_PIC/lib/${i}.so.2    ${PREFIX}/lib
-	@${LN} -sf ${i}.so.2 ${PREFIX}/lib/${i}.so
-.endfor
-
-	@${INSTALL_DATA} ${WRKSRC}/include/cblas.h   ${PREFIX}/include
-	@${INSTALL_DATA} ${WRKSRC}/include/clapack.h ${PREFIX}/include
-.if !defined(NOPORTDOCS)
-	@${MKDIR} ${DOCSDIR}
-	${INSTALL_DATA} ${WRKSRC}/doc/* ${DOCSDIR}
-.endif
-
-.include <${FILESDIR}/Makefile.test>
-.include <bsd.port.post.mk>
diff --git a/math/atlas-devel/distinfo b/math/atlas-devel/distinfo
deleted file mode 100644
index 64e8d5306082..000000000000
--- a/math/atlas-devel/distinfo
+++ /dev/null
@@ -1,2 +0,0 @@
-SHA256 (atlas3.9.11.tar.bz2) = d91e593a772cf540ff693f7d8c43d10c3037eb334c5c77572ea1b6a64a0b9677
-SIZE (atlas3.9.11.tar.bz2) = 4699100
diff --git a/math/atlas-devel/files/Makefile.test b/math/atlas-devel/files/Makefile.test
deleted file mode 100644
index 1eaae571f323..000000000000
--- a/math/atlas-devel/files/Makefile.test
+++ /dev/null
@@ -1,35 +0,0 @@
-ALLTESTS =	xsl3blastst xdl3blastst xcl3blastst xzl3blastst \
-		xsl2blastst xdl2blastst xcl2blastst xzl2blastst \
-		xsl1blastst xdl1blastst xcl1blastst xzl1blastst \
-		xslutst xslutstF xdlutst xdlutstF xclutst xclutstF \
-		xzlutst xzlutstF xsllttst xsllttstF xdllttst xdllttstF \
-		xcllttst xcllttstF xzllttst xzllttstF
-
-ALLTESTS_PT =	xsl3blastst_pt xdl3blastst_pt xcl3blastst_pt xzl3blastst_pt \
-		xslutst_pt xslutstF_pt xdlutst_pt xdlutstF_pt xclutst_pt xclutstF_pt \
-		xzlutst_pt xzlutstF_pt xsllttst_pt xsllttstF_pt xdllttst_pt \
-		xdllttstF_pt xcllttst_pt xcllttstF_pt xzllttst_pt xzllttstF_pt
-#build errors?
-#		xsl2blastst_pt xdl2blastst_pt xcl2blastst_pt xzl2blastst_pt \
-#		xsl1blastst_pt xdl1blastst_pt xcl1blastst_pt xzl1blastst_pt \
-#Failed tests
-do-test:
-	@for i in ${ALLTESTS} ; do \
-		${ECHO_CMD} "Making $${i}" ; \
-		cd ${WRKDIR}/ATLAS/NON_THREADED_PIC/bin ; ${MAKE} $${i} ; \
-	done
-	@for i in ${ALLTESTS_PT} ; do \
-		${ECHO_CMD} "Making $${i}" ; \
-		cd ${WRKDIR}/ATLAS/THREADED_PIC/bin ; ${MAKE} $${i} ; \
-	done
-	@for i in ${ALLTESTS} ; do \
-		${ECHO_CMD} "Benchmarking $${i}" ; \
-		cd ${WRKDIR}/ATLAS/NON_THREADED_PIC/bin ; ./$${i} ; \
-	done
-	@for i in ${ALLTESTS_PT} ; do \
-		${ECHO_CMD} "Benchmarking $${i}" ; \
-		cd ${WRKDIR}/ATLAS/THREADED_PIC/bin ; ./$${i} ; \
-	done
-		
-
-
diff --git a/math/atlas-devel/files/alpha-patch b/math/atlas-devel/files/alpha-patch
deleted file mode 100644
index 564198d5be91..000000000000
--- a/math/atlas-devel/files/alpha-patch
+++ /dev/null
@@ -1,9 +0,0 @@
---- src/blas/gemm/GOTO/ATLU_usergemm.c~ Mon Jun 17 10:38:22 2002
-+++ src/blas/gemm/GOTO/ATLU_usergemm.c  Sun Aug 18 10:41:19 2002
-@@ -1,5 +1,5 @@
- #include "atlas_misc.h"
--#include <sys/mman.h>
-+/*#include <sys/mman.h>*/
- 
- #ifdef EV6
-    #ifdef ATL_OS_OSF1
diff --git a/math/atlas-devel/files/patch-CONFIG+src+SpewMakeInc.c b/math/atlas-devel/files/patch-CONFIG+src+SpewMakeInc.c
deleted file mode 100644
index 502d4c169a0f..000000000000
--- a/math/atlas-devel/files/patch-CONFIG+src+SpewMakeInc.c
+++ /dev/null
@@ -1,20 +0,0 @@
---- CONFIG/src/SpewMakeInc.c.orig	2009-04-07 23:11:39.000000000 +0900
-+++ CONFIG/src/SpewMakeInc.c	2009-04-13 17:20:56.000000000 +0900
-@@ -737,7 +737,7 @@
-    fprintf(fpout, "#  ------------------------------------\n");
-    fprintf(fpout, "#  Reference and system libraries\n");
-    fprintf(fpout, "#  ------------------------------------\n");
--   fprintf(fpout, "   FBLASlib = $(LIBdir)/libf77refblas.a\n");
-+   fprintf(fpout, "   FBLASlib = -L%%LOCALBASE%%/lib -lblas\n");
-    fprintf(fpout, "   BLASlib = $(FBLASlib)\n");
-    if (LAsrcd)
-    {
-@@ -754,7 +754,7 @@
-    fprintf(fpout, "   SLAPACKlib = \n");
-    if (THREADS)
-    {
--      fprintf(fpout, "   LIBS = -lpthread");
-+      fprintf(fpout, "   LIBS = %%PTHREAD_LIBS%%");
-       if (OSIsWin(OS))
-          fprintf(fpout, " -lkernel32");
-    }
diff --git a/math/atlas-devel/files/patch-CONFIG+src+atlcomp.txt b/math/atlas-devel/files/patch-CONFIG+src+atlcomp.txt
deleted file mode 100644
index 7a4be8e203cc..000000000000
--- a/math/atlas-devel/files/patch-CONFIG+src+atlcomp.txt
+++ /dev/null
@@ -1,121 +0,0 @@
---- CONFIG/src/atlcomp.txt	2009-04-07 23:11:39.000000000 +0900
-+++ CONFIG/src/atlcomp.txt	2009-04-13 17:22:20.000000000 +0900
-@@ -40,31 +40,31 @@
- #
- # Core2 & Corei7
- MACH=Corei7 OS=ALL LVL=1000 COMPS=smc,dmc,skc,dkc,icc
--   'gcc' '-fomit-frame-pointer -mfpmath=sse -msse3 -O2 -fno-schedule-insns2'
-+   '%%CC%%' '-fomit-frame-pointer -mfpmath=sse -msse3 -O2 -fno-schedule-insns2'
- MACH=Core2 OS=ALL LVL=1000 COMPS=smc,dmc,skc,dkc,icc
--   'gcc' '-fomit-frame-pointer -mfpmath=sse -msse3 -O2'
-+   '%%CC%%' '-fomit-frame-pointer -mfpmath=sse -msse3 -O2'
- # PPRO,PII,PIII,P4,P4E,K7,HAMMER
- MACH=PPRO,PII,PIII,P4,P4E,K7,HAMMER OS=ALL LVL=1000 COMPS=f77
--   'gfortran' '-fomit-frame-pointer -mfpmath=387 -O2 -falign-loops=4'
-+   '%%FC%%' '-fomit-frame-pointer -mfpmath=387 -O2 -falign-loops=4'
- MACH=PPRO,PII,PIII,P4,P4E,K7,HAMMER OS=ALL LVL=1000 COMPS=smc,dmc,skc,dkc,icc
--   'gcc' '-fomit-frame-pointer -mfpmath=387 -O2 -falign-loops=4'
-+   '%%CC%%' '-fomit-frame-pointer -mfpmath=387 -O2 -falign-loops=4'
- # CoreSolo,CoreDuo
- MACH=CoreSolo,CoreDuo OS=ALL LVL=1000 COMPS=smc,dmc,skc,dkc,icc
--   'gcc' '-fomit-frame-pointer -O3 -mfpmath=387'
-+   '%%CC%%' '-fomit-frame-pointer -O3 -mfpmath=387'
- # 3rd generation opteron (Barcelona and descendents)
- MACH=AMD64K10h OS=ALL LVL=1000 COMPS=f77
--   'gfortran' '-fomit-frame-pointer -mfpmath=sse -msse3 -O2 -falign-loops=32'
-+   '%%FC%%' '-fomit-frame-pointer -mfpmath=sse -msse3 -O2 -falign-loops=32'
- MACH=AMD64K10h OS=ALL LVL=1000 COMPS=smc,dmc,skc,dkc,icc
--   'gcc' '-fomit-frame-pointer -mfpmath=sse -msse3 -O2 -falign-loops=32'
-+   '%%CC%%' '-fomit-frame-pointer -mfpmath=sse -msse3 -O2 -falign-loops=32'
- # UltraSPARC III & IV
- MACH=USIII,USIV OS=ALL LVL=1000 COMPS=smc,dmc,skc,dkc
--   'gcc' '-mcpu=ultrasparc3 -mtune=ultrasparc3 -O3 -funroll-all-loops'
-+   '%%CC%%' '-mcpu=ultrasparc3 -mtune=ultrasparc3 -O3 -funroll-all-loops'
- MACH=USIII,USIV OS=ALL LVL=1000 COMPS=icc,xcc
--   'gcc' '-mcpu=ultrasparc3 -mtune=ultrasparc3 -O'
-+   '%%CC%%' '-mcpu=ultrasparc3 -mtune=ultrasparc3 -O'
- MACH=USIII,USIV OS=ALL LVL=1000 COMPS=f77
-    'f77' '-dalign -native -xO5'
- MACH=USIII,USIV OS=ALL LVL=100 COMPS=f77
--   'gfortran' '-O -mcpu=ultrasparc3 -mtune=ultrasparc3'
-+   '%%FC%%' '-O -mcpu=ultrasparc3 -mtune=ultrasparc3'
- MACH=USIII,USIV OS=ALL LVL=10 COMPS=f77
-    'g77' '-O -mcpu=ultrasparc3 -mtune=ultrasparc3'
- #
-@@ -72,11 +72,11 @@
- #
- # These gcc 4 default flags will die on gcc3, allowing gcc3's flags to be used
- MACH=IA64Itan,IA64Itan2 OS=ALL LVL=1010 COMPS=smc,dmc,skc,dkc
--   'gcc' '-fomit-frame-pointer -O2 -fno-tree-loop-optimize'
-+   '%%CC%%' '-fomit-frame-pointer -O2 -fno-tree-loop-optimize'
- MACH=IA64Itan,IA64Itan2 OS=ALL LVL=1000 COMPS=smc,dmc,skc,dkc
--   'gcc' '-fomit-frame-pointer -O2'
-+   '%%CC%%' '-fomit-frame-pointer -O2'
- MACH=IA64Itan,IA64Itan2 OS=ALL LVL=1010 COMPS=f77
--   'gfortran' '-fomit-frame-pointer -O2 -fno-tree-loop-optimize'
-+   '%%FC%%' '-fomit-frame-pointer -O2 -fno-tree-loop-optimize'
- #
- # IRIX/MIPS
- #
-@@ -92,7 +92,7 @@
- # pathcc at -O2 -- seems to be a compiler error
- #
- MACH=MIPSICE9 OS=ALL LVL=500 COMPS=icc,smc,dmc,skc,dkc,xcc
--   'gcc' '-O2 -mips64 -march=5kf -mtune=5kf -fno-schedule-insns -fschedule-insns2 -fno-peephole -fno-peephole2'
-+   '%%CC%%' '-O2 -mips64 -march=5kf -mtune=5kf -fno-schedule-insns -fschedule-insns2 -fno-peephole -fno-peephole2'
- MACH=MIPSICE9 OS=ALL LVL=1000 COMPS=f77
-    'pathf95' '-march=auto -O2'
- MACH=MIPSICE9 OS=ALL LVL=1 COMPS=skc,dkc
-@@ -105,9 +105,9 @@
- # G4 flags
- #
- MACH=PPCG4 OS=ALL LVL=1000 COMPS=icc,smc,dmc,skc,dkc,xcc
--   'gcc' '-O3 -maltivec -mabi=altivec -mcpu=7400 -mtune=7400'
-+   '%%CC%%' '-O3 -maltivec -mabi=altivec -mcpu=7400 -mtune=7400'
- MACH=PPCG4 OS=OSX LVL=1001 COMPS=icc,smc,dmc,skc,dkc,xcc
--   'gcc' '-O3 -maltivec -mabi=altivec -mcpu=7400 -mtune=7400 -no-cpp-precomp -faltivec'
-+   '%%CC%%' '-O3 -maltivec -mabi=altivec -mcpu=7400 -mtune=7400 -no-cpp-precomp -faltivec'
- 
- #
- # OS X / PowerPC970; the
-@@ -116,19 +116,19 @@
- # performance by removing them (for all PowerPC platforms)
- #
- MACH=PPCG5 OS=OSX LVL=1001 COMPS=icc,smc,dmc,skc,dkc,xcc
--   'gcc' '-mpowerpc64 -maltivec -mabi=altivec -mcpu=970 -mtune=970 -faltivec -O3'
-+   '%%CC%%' '-mpowerpc64 -maltivec -mabi=altivec -mcpu=970 -mtune=970 -faltivec -O3'
- MACH=PPCG5 OS=OSX LVL=1010 COMPS=icc,smc,dmc,skc,dkc,xcc
--   'gcc' '-mpowerpc64 -maltivec -mabi=altivec -mcpu=970 -mtune=970 -faltivec -force_cpusubtype_ALL -O3 -fno-schedule-insns -fno-rerun-loop-opt'
-+   '%%CC%%' '-mpowerpc64 -maltivec -mabi=altivec -mcpu=970 -mtune=970 -faltivec -force_cpusubtype_ALL -O3 -fno-schedule-insns -fno-rerun-loop-opt'
- MACH=PPCG5 OS=ALL LVL=1000 COMPS=icc,smc,dmc,skc,dkc,xcc
--   'gcc' '-mpowerpc64 -maltivec -mabi=altivec -mcpu=970 -mtune=970 -O3'
-+   '%%CC%%' '-mpowerpc64 -maltivec -mabi=altivec -mcpu=970 -mtune=970 -O3'
- MACH=POWER5 OS=ALL LVL=1010 COMPS=icc,smc,dmc,skc,dkc,xcc
--   'gcc' '-mcpu=power5 -mtune=power5 -O3 -fno-schedule-insns -fno-rerun-loop-opt'
-+   '%%CC%%' '-mcpu=power5 -mtune=power5 -O3 -fno-schedule-insns -fno-rerun-loop-opt'
- MACH=POWER5 OS=ALL LVL=1010 COMPS=f77
--   'gfortran' '-mcpu=power5 -mtune=power5 -O3 -fno-schedule-insns -fno-rerun-loop-opt'
-+   '%%FC%%' '-mcpu=power5 -mtune=power5 -O3 -fno-schedule-insns -fno-rerun-loop-opt'
- MACH=POWER5 OS=ALL LVL=1010 COMPS=f77
-    'xlf' '-qtune=pwr5 -qarch=pwr5 -O3 -qmaxmem=-1 -qfloat=hsflt'
- MACH=POWER4 OS=ALL LVL=1010 COMPS=icc,dmc,smc,dkc,skc,xcc
--   'gcc' '-mcpu=power4 -mtune=power4 -O3 -fno-schedule-insns -fno-rerun-loop-opt'
-+   '%%CC%%' '-mcpu=power4 -mtune=power4 -O3 -fno-schedule-insns -fno-rerun-loop-opt'
- MACH=POWER4 OS=ALL LVL=1010 COMPS=f77
-    'xlf' '-qtune=pwr4 -qarch=pwr4 -O3 -qmaxmem=-1 -qfloat=hsflt'
- #
-@@ -148,10 +148,10 @@
- # Generic defaults
- #
- MACH=ALL OS=ALL LVL=5 COMPS=icc,smc,dmc,skc,dkc,xcc
--   'gcc' '-O -fomit-frame-pointer'
-+   '%%CC%%' '-O -fomit-frame-pointer'
- MACH=ALL OS=ALL LVL=5 COMPS=f77
--   'gfortran' '-O'
-+   '%%FC%%' '-O'
- MACH=ALL OS=ALL LVL=4 COMPS=f77
--   'g77' '-O'
-+   '%%FC%%' '-O'
- MACH=ALL OS=ALL LVL=0 COMPS=f77
--   'f77' '-O'
-+   '%%FC%%' '-O'
diff --git a/math/atlas-devel/files/patch-CONFIG+src+backend+archinfo_freebsd.c b/math/atlas-devel/files/patch-CONFIG+src+backend+archinfo_freebsd.c
deleted file mode 100644
index eb8bb07d29e9..000000000000
--- a/math/atlas-devel/files/patch-CONFIG+src+backend+archinfo_freebsd.c
+++ /dev/null
@@ -1,76 +0,0 @@
---- CONFIG/src/backend/archinfo_freebsd.c.orig	Wed Jan 31 06:30:00 2007
-+++ CONFIG/src/backend/archinfo_freebsd.c	Thu Feb  8 16:37:05 2007
-@@ -73,13 +73,24 @@
-       }
-       break;
-    case AFSPARC: /* don't know */
-+      if (!CmndOneLine(NULL, "sysctl hw.model", res))
-+      {
-+          if (strstr(res, "UltraSparc-IV"))  mach = SunUSIV;
-+          if (strstr(res, "UltraSparc-II")) mach = SunUSII;
-+          if (strstr(res, "UltraSparc-I")) mach = SunUSI;
-+          if (strstr(res, "UltraSparc")) mach = SunUSI;
-+          else mach = SunUSI;
-+      }
-       break;
-    case AFALPHA:
-       #if 0
-       if (!CmndOneLine(NULL, "sysctl hw.model", res))
-       {
-          if (strstr(res, "433au")) mach = Dec21164;
-+         else if (strstr(res, "500au")) mach = Dec21164;
-+         else if (strstr(res, "AlphaPC 164")) mach = Dec21164;
-          else if (strstr(res, "XP1000")) mach = Dec21264;
-+         else mach = Dec21264;
-       }
-       #endif
-       break;
-@@ -89,15 +100,33 @@
-       if (!CmndOneLine(NULL, "sysctl hw.model", res))
-       {
-          if (strstr(res, "Pentium Pro")) mach = IntPPRO;
-+         else if (strstr(res, "Pentium(R) D")) mach = IntP4E;
-+         else if (strstr(res, "Pentium(R) Pro")) mach = IntPPRO;
-+         else if (strstr(res, "Pentium 4")) mach = IntP4;
-+         else if (strstr(res, "Pentium(R) 4")) mach = IntP4;
-+         else if (strstr(res, "Pentium(R) M")) mach = IntP4;
-          else if (strstr(res, "Pentium III")) mach = IntPIII;
-          else if (strstr(res, "Pentium II ")) mach = IntPII;
-          else if (strstr(res, "Athlon")) mach = AmdAthlon;
-+         else if (strstr(res, "Pentium III/Pentium III")) mach = IntPIII;
-+         else if (strstr(res, "Pentium(R) III")) mach = IntPIII;
-+         else if (strstr(res, "Pentium II")) mach = IntPII;
-+         else if (strstr(res, "Pentium II/PentiumII")) mach = IntPII;
-+         else if (strstr(res, "Pentium(R) II ")) mach = IntPII;
-+         else if (strstr(res, "Celeron")) mach = IntPII;
-+         else if (strstr(res, "Celeron(R)")) mach = IntPII;
-+         else if (strstr(res, "Opteron(tm)")) mach = AmdHammer;
-+         else if (strstr(res, "AMD Athlon(tm) 64")) mach = AmdHammer;
-          else if (strstr(res, "AMD-K7")) mach = AmdAthlon;
--         else if (strstr(res, "32 bit Hammer")) mach = AmdHammer;
--         else if (strstr(res, "64 bit Hammer")) mach = AmdHammer;
--         else if (strstr(res, "Pentium/P55C")) mach = IntP5MMX; /* sent by */
--         else if (strstr(res, "Pentium")) mach=IntP5;       /* Nakata Maho */
-          else if (strstr(res, "iMac4,1")) mach=IntCoreDuo;
-+         else if (strstr(res, "Sempron(tm)")) mach = AmdAthlon;
-+         else if (strstr(res, "AMD-K6(tm)")) mach = IntP5MMX;
-+         else if (strstr(res, "Pentium/P55C")) mach = IntP5MMX;
-+         else if (strstr(res, "Pentium/P54C")) mach=IntP5;
-+         else if (strstr(res, "Pentium")) mach=IntP5;
-+         else if (strstr(res, "VIA"))     mach=IntP5MMX;       
-+         else if (strstr(res, "Crusoe(tm)")) mach=IntP5MMX;       
-+         else mach = IntP5;
-       }
-       break;
-    default:;
-@@ -156,8 +185,8 @@
- {
-    int mhz=0;
-    char res[1024];
--   if (!CmndOneLine(NULL, "sysctl hw.cpufrequency", res) )
--      mhz = GetFirstDouble(res) / 1000000;
-+   if (!CmndOneLine(NULL, "sysctl kern.timecounter.choice dev.cpu.0.freq | grep dev", res) ) //requires cpufreq.ko
-+   mhz = GetLastInt(res);
-    return(mhz);
- }
- 
diff --git a/math/atlas-devel/files/patch-tune+sysinfo+L1CacheSize.c b/math/atlas-devel/files/patch-tune+sysinfo+L1CacheSize.c
deleted file mode 100644
index f93ac6da884f..000000000000
--- a/math/atlas-devel/files/patch-tune+sysinfo+L1CacheSize.c
+++ /dev/null
@@ -1,20 +0,0 @@
---- tune/sysinfo/L1CacheSize.c.orig	Tue Dec 19 06:48:02 2006
-+++ tune/sysinfo/L1CacheSize.c	Wed Dec 27 12:43:59 2006
-@@ -31,7 +31,7 @@
- #include <stdio.h>
- #include <stdlib.h>
- 
--#define REPS 4096
-+#define REPS 12288
- 
- #ifndef time00
-    #define time00 ATL_cputime
-@@ -267,7 +267,7 @@
- 
- main(int nargs, char *args[])
- {
--   int L1Size, MaxSize=64, correct=1;
-+   int L1Size, MaxSize=256, correct=1;
-    FILE *L1f;
- 
-    if (nargs > 2)
diff --git a/math/atlas-devel/files/thread-patch b/math/atlas-devel/files/thread-patch
deleted file mode 100644
index 8dc50b6dbf7a..000000000000
--- a/math/atlas-devel/files/thread-patch
+++ /dev/null
@@ -1,12 +0,0 @@
---- CONFIG/src/SpewMakeInc.c~	2009-04-13 17:52:14.000000000 +0900
-+++ CONFIG/src/SpewMakeInc.c	2009-04-13 17:53:05.000000000 +0900
-@@ -423,7 +423,8 @@
-             &srcdir, &blddir, &USEDEFL1, &USEARCHDEF, &LATUNE, &nof77,
-             &f2cdefs, &cdefs, &pmake, &flapack, &smaflags, &dmaflags,
-             &f77lib, &LAsrcd, &l2size, &targ);
--   if (ncpu > 1) THREADS = 1;
-+/* if (ncpu > 1) THREADS = 1; */
-+   THREADS = 1;
-    if (!outfile)
-       fpout = stdout;
-    else
diff --git a/math/atlas-devel/pkg-descr b/math/atlas-devel/pkg-descr
deleted file mode 100644
index c59c0267a409..000000000000
--- a/math/atlas-devel/pkg-descr
+++ /dev/null
@@ -1,18 +0,0 @@
-The ATLAS (Automatically Tuned Linear Algebra Software) project is
-an ongoing research effort focusing on applying empirical techniques
-in order to provide portable performance. 
-
-At present, it provides C and Fortran77 interfaces to a
-portably efficient BLAS implementation, as well as a few routines from LAPACK.
-
-If you use blas, you can simply change flags when linking,
-from -lblas to -lf77blas -latlas (order is important).
-
-A few routines from LAPACK are merged into one library as libalapack.
-It requres both C and Fortran77 interfaces, and thus that link line would be:
--lalapack -lf77blas -lcblas -latlas -lg2c -lm .
-
-Other choice of CC and CFLAGS are *NOT* recommended.
-They are already optimized for this platform and automatically searched.
-
-WWW: http://math-atlas.sourceforge.net/
diff --git a/math/atlas-devel/pkg-plist b/math/atlas-devel/pkg-plist
deleted file mode 100644
index 73fb82ea9e77..000000000000
--- a/math/atlas-devel/pkg-plist
+++ /dev/null
@@ -1,50 +0,0 @@
-include/cblas.h
-include/clapack.h
-%%WITH_STATICLIB%%lib/libalapack.a
-lib/libalapack.so.2
-lib/libalapack.so
-%%WITH_STATICLIB%%lib/libalapack_r.a
-lib/libalapack_r.so.2
-lib/libalapack_r.so
-%%WITH_STATICLIB%%lib/libatlas.a
-lib/libatlas.so.2
-lib/libatlas.so
-%%WITH_STATICLIB%%lib/libatlas_r.a
-lib/libatlas_r.so.2
-lib/libatlas_r.so
-%%WITH_STATICLIB%%lib/libcblas.a
-lib/libcblas.so.2
-lib/libcblas.so
-%%WITH_STATICLIB%%lib/libcblas_r.a
-lib/libcblas_r.so.2
-lib/libcblas_r.so
-%%WITH_STATICLIB%%lib/libf77blas.a
-lib/libf77blas.so.2
-lib/libf77blas.so
-%%WITH_STATICLIB%%lib/libf77blas_r.a
-lib/libf77blas_r.so.2
-lib/libf77blas_r.so
-%%WITH_STATICLIB%%lib/libptcblas.a
-lib/libptcblas.so.2
-lib/libptcblas.so
-%%WITH_STATICLIB%%lib/libptf77blas.a
-lib/libptf77blas.so.2
-lib/libptf77blas.so
-%%PORTDOCS%%share/doc/atlas/AtlasCredits.txt
-%%PORTDOCS%%share/doc/atlas/BootSequence.txt
-%%PORTDOCS%%share/doc/atlas/ChangeLog
-%%PORTDOCS%%share/doc/atlas/DirStruct.txt
-%%PORTDOCS%%share/doc/atlas/INDEX.txt
-%%PORTDOCS%%share/doc/atlas/LibReadme.txt
-%%PORTDOCS%%share/doc/atlas/TestTime.txt
-%%PORTDOCS%%share/doc/atlas/TroubleShoot.txt
-%%PORTDOCS%%share/doc/atlas/Windows.txt
-%%PORTDOCS%%share/doc/atlas/atlas_contrib.pdf
-%%PORTDOCS%%share/doc/atlas/atlas_devel.pdf
-%%PORTDOCS%%share/doc/atlas/atlas_install.pdf
-%%PORTDOCS%%share/doc/atlas/atlas_over.pdf
-%%PORTDOCS%%share/doc/atlas/cblas.pdf
-%%PORTDOCS%%share/doc/atlas/cblasqref.pdf
-%%PORTDOCS%%share/doc/atlas/f77blasqref.pdf
-%%PORTDOCS%%share/doc/atlas/lapackqref.pdf
-%%PORTDOCS%%@dirrm share/doc/atlas