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authorYuri Victorovich <yuri@FreeBSD.org>2022-05-01 10:10:08 -0700
committerYuri Victorovich <yuri@FreeBSD.org>2022-05-01 10:37:04 -0700
commit8db0b60850a52a1fb0030091485455e07f88912a (patch)
treec5c5bab56c26b51a115b2cb7b60287143abc5667 /biology
parentgraphics/curtail: Update 1.2.2 -> 1.3.0 (diff)
biology/py-mrcfile: New port: MRC file I/O library which is used in structural biology
Diffstat (limited to 'biology')
-rw-r--r--biology/Makefile1
-rw-r--r--biology/py-mrcfile/Makefile19
-rw-r--r--biology/py-mrcfile/distinfo3
-rw-r--r--biology/py-mrcfile/pkg-descr5
4 files changed, 28 insertions, 0 deletions
diff --git a/biology/Makefile b/biology/Makefile
index 821cf358e8c3..7e9dd63dc6c6 100644
--- a/biology/Makefile
+++ b/biology/Makefile
@@ -161,6 +161,7 @@
SUBDIR += py-libsedml
SUBDIR += py-loompy
SUBDIR += py-macs2
+ SUBDIR += py-mrcfile
SUBDIR += py-multiqc
SUBDIR += py-ont-fast5-api
SUBDIR += py-orange3-bioinformatics
diff --git a/biology/py-mrcfile/Makefile b/biology/py-mrcfile/Makefile
new file mode 100644
index 000000000000..b1fd9370eec9
--- /dev/null
+++ b/biology/py-mrcfile/Makefile
@@ -0,0 +1,19 @@
+PORTNAME= mrcfile
+DISTVERSION= 1.3.0
+CATEGORIES= biology python
+MASTER_SITES= CHEESESHOP
+PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
+
+MAINTAINER= yuri@FreeBSD.org
+COMMENT= MRC file I/O library which is used in structural biology
+
+LICENSE= BSD3CLAUSE
+
+RUN_DEPENDS= ${PYNUMPY}
+
+USES= python
+USE_PYTHON= distutils concurrent autoplist
+
+NO_ARCH= yes
+
+.include <bsd.port.mk>
diff --git a/biology/py-mrcfile/distinfo b/biology/py-mrcfile/distinfo
new file mode 100644
index 000000000000..c8c3f20f1d06
--- /dev/null
+++ b/biology/py-mrcfile/distinfo
@@ -0,0 +1,3 @@
+TIMESTAMP = 1651424205
+SHA256 (mrcfile-1.3.0.tar.gz) = 3a113042d24820b9dfc6902cb9d93bcbebdee22beb40552f2c35303ace4b0547
+SIZE (mrcfile-1.3.0.tar.gz) = 32627
diff --git a/biology/py-mrcfile/pkg-descr b/biology/py-mrcfile/pkg-descr
new file mode 100644
index 000000000000..3e2b3851bfdc
--- /dev/null
+++ b/biology/py-mrcfile/pkg-descr
@@ -0,0 +1,5 @@
+mrcfile is a Python implementation of the MRC2014 file
+format, which is used in structural biology to store
+image and volume data.
+
+WWW: https://github.com/ccpem/mrcfile