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authorKurt Jaeger <pi@FreeBSD.org>2014-08-23 18:04:58 +0000
committerKurt Jaeger <pi@FreeBSD.org>2014-08-23 18:04:58 +0000
commit690da7ea383f1f7ba029563658b17f1a2544007b (patch)
tree23e972a9950cc8d2fbf2c0128d929e3655a093ab /biology/phrap/files/patch-db.c
parentarchivers/rubygem-rubyzip: update to 1.1.6 (diff)
update ports:
biology/phrab biology/phred biology/consed Although these programs are licensed freely for academic and nonprofit purposes, users have to contact the authors to obtain the tarballs. PR: 191336 Submitted by: mzaki@m.u-tokyo.ac.jp (maintainer)
Notes
Notes: svn path=/head/; revision=365765
Diffstat (limited to 'biology/phrap/files/patch-db.c')
-rw-r--r--biology/phrap/files/patch-db.c19
1 files changed, 19 insertions, 0 deletions
diff --git a/biology/phrap/files/patch-db.c b/biology/phrap/files/patch-db.c
new file mode 100644
index 000000000000..ae100313b440
--- /dev/null
+++ b/biology/phrap/files/patch-db.c
@@ -0,0 +1,19 @@
+--- ./db.c.orig 2009-04-21 18:10:09.000000000 +0200
++++ ./db.c 2014-08-02 12:39:30.000000000 +0200
+@@ -38,6 +38,8 @@
+ int qseq_trans[256];
+ int t_num_entries;
+
++void size_conflict(SEQ_AREA,long int,char *);
++
+ typedef long int POS;
+ static POS id_pos, descrip_pos, seq_pos, seq_length;
+ /* N.B. following needed by Bonfield code, so original "static" designation has
+@@ -571,6 +573,7 @@
+ (unsigned long int)db->seq_area_size, (unsigned long int)db->id_area_size, (unsigned long int)db->descrip_area_size);
+ }
+
++void
+ size_conflict(size1, size2, label)
+ SEQ_AREA size1;
+ long int size2;