summaryrefslogtreecommitdiff
path: root/biology/fasta3
diff options
context:
space:
mode:
authorJames E. Housley <jeh@FreeBSD.org>2001-05-07 12:16:33 +0000
committerJames E. Housley <jeh@FreeBSD.org>2001-05-07 12:16:33 +0000
commitef5b91998292a9c1b142e4fb2367456cbec0cac0 (patch)
tree83ebcf33a781aa3a3db564781c9514547fa99e3e /biology/fasta3
parentupdate graphics/libggi from 2.0b2.1 to 2.0b3 (diff)
Updata biology/fasta3 to version 33.t08.d4
PR: 27176 Submitted by: Johann Visagie <johann@egenetics.com> MAINTAINER
Notes
Notes: svn path=/head/; revision=42359
Diffstat (limited to 'biology/fasta3')
-rw-r--r--biology/fasta3/Makefile2
-rw-r--r--biology/fasta3/distinfo2
-rw-r--r--biology/fasta3/files/patch-Makefile12
3 files changed, 8 insertions, 8 deletions
diff --git a/biology/fasta3/Makefile b/biology/fasta3/Makefile
index 5bf5664398b8..9723e48be470 100644
--- a/biology/fasta3/Makefile
+++ b/biology/fasta3/Makefile
@@ -6,7 +6,7 @@
#
PORTNAME= fasta3
-PORTVERSION= 33.t08.d3
+PORTVERSION= 33.t08.d4
CATEGORIES= biology
MASTER_SITES= http://ftp.virginia.edu/pub/fasta/
DISTNAME= fasta${PORTVERSION:S/.//g}
diff --git a/biology/fasta3/distinfo b/biology/fasta3/distinfo
index d8d03f5702c6..c124117713f8 100644
--- a/biology/fasta3/distinfo
+++ b/biology/fasta3/distinfo
@@ -1 +1 @@
-MD5 (fasta33t08d3.shar.Z) = 4fc71c3f7f4f8f42c3e6fb9899bf29ae
+MD5 (fasta33t08d4.shar.Z) = 66f0c4731a6ff1cf123067c6ec46e352
diff --git a/biology/fasta3/files/patch-Makefile b/biology/fasta3/files/patch-Makefile
index bdc135f01c97..8930300dacd2 100644
--- a/biology/fasta3/files/patch-Makefile
+++ b/biology/fasta3/files/patch-Makefile
@@ -1,5 +1,5 @@
---- Makefile.orig Mon Jan 29 13:44:28 2001
-+++ Makefile Mon Jan 29 14:08:43 2001
+--- Makefile.orig Mon May 7 11:36:23 2001
++++ Makefile Mon May 7 11:40:36 2001
@@ -12,13 +12,13 @@
# use -DBIG_LIB64 to generate 64-bit offsets in map_db .xin files
@@ -11,8 +11,8 @@
#CC= gcc -g -Wall
#
# standard line for normal searching
--CFLAGS= -DM10_CONS -DUNIX -DTIMES -DHZ=60 -DBIGMEM -DMAX_WORKERS=4 -DTHR_EXIT=pthread_exit -DPROGRESS -DFASTA_HOST='"fasta.bioch.virginia.edu/fasta/cgi"' -DIS_LITTLE_ENDIAN
-+CFLAGS+= -DM10_CONS -DUNIX -DTIMES -DHZ=60 -DBIGMEM -DMAX_WORKERS=4 -DTHR_EXIT=pthread_exit -DPROGRESS -DFASTA_HOST='"fasta.bioch.virginia.edu/fasta/cgi"' -DIS_LITTLE_ENDIAN
+-CFLAGS= -DM10_CONS -DUNIX -DTIMES -DHZ=60 -DBIGMEM -DMAX_WORKERS=4 -DTHR_EXIT=pthread_exit -DPROGRESS -DFASTA_HOST='"fasta.bioch.virginia.edu/fasta/cgi"' -DIS_LITTLE_ENDIAN -DUSE_MMAP
++CFLAGS+= -DM10_CONS -DUNIX -DTIMES -DHZ=60 -DBIGMEM -DMAX_WORKERS=4 -DTHR_EXIT=pthread_exit -DPROGRESS -DFASTA_HOST='"fasta.bioch.virginia.edu/fasta/cgi"' -DIS_LITTLE_ENDIAN -DUSE_MMAP
# -I/usr/local/include/mysql -DMYSQL_DB
#(for mySQL databases) (also requires change to Makefile33.common)
@@ -30,7 +30,7 @@
+#THR_SUBS = pthr_subs
+#THR_LIBS = -threads
+#THR_CC =
-+
++#
#for Sun
#THR_SUBS = uthr_subs
#THR_LIBS = -lthread
@@ -43,7 +43,7 @@
# renamed (fasta33) programs
-include Makefile33.common
-+# include Makefile33.common
++#include Makefile33.common
# conventional (fasta3) names
-#include Makefile.common
+include Makefile.common