diff options
| author | Jason W. Bacon <jwb@FreeBSD.org> | 2021-09-06 09:21:44 -0500 |
|---|---|---|
| committer | Jason W. Bacon <jwb@FreeBSD.org> | 2021-09-06 09:21:44 -0500 |
| commit | fa2e0b8c66d459b05b1a6624cd482950f9ea3376 (patch) | |
| tree | a9aa7a7aacf3ee6d8ee32861ccd2d783878ee809 /biology/emboss/files/patch-emboss_emboss.default.template | |
| parent | lang/rust: Fix for missing getauxval function on FreeBSD (diff) | |
biology/emboss: Add emboss-shell: Run subshell with proper PATH
Also silence portlint and stage-qa warnings
PR: 258316
Approved by: wen
Diffstat (limited to 'biology/emboss/files/patch-emboss_emboss.default.template')
| -rw-r--r-- | biology/emboss/files/patch-emboss_emboss.default.template | 20 |
1 files changed, 20 insertions, 0 deletions
diff --git a/biology/emboss/files/patch-emboss_emboss.default.template b/biology/emboss/files/patch-emboss_emboss.default.template new file mode 100644 index 000000000000..0f06201f5f80 --- /dev/null +++ b/biology/emboss/files/patch-emboss_emboss.default.template @@ -0,0 +1,20 @@ +--- emboss/emboss.default.template.orig 2011-03-11 09:04:31 UTC ++++ emboss/emboss.default.template +@@ -4,7 +4,7 @@ + # By default this is /usr/local/share/EMBOSS/test but the directory can + # be changed with --prefix when you configure EMBOSS. + +-# SET emboss_tempdata path_to_directory_$EMBOSS/test ++# SET emboss_tempdata %%DATADIR%%/test + + # Proxy - set this if any databases are accessed through a proxy web server. + # Turn off in the DB definition with proxy: ":" for any +@@ -15,7 +15,7 @@ + # Logfile - set this to a file that any user can append to + # and EMBOSS applications will automatically write log information + +-# SET emboss_logfile /packages/emboss/emboss/log ++# SET emboss_logfile /var/log/emboss.log + + # Pagesize - this is the size of disc page blocks and is + # required by the 'dbx' indexing programs and 'method: emboss' |