biology/cdbfasta: Update to 2018.10.05

Fix build for c++17
Improve pkg-descr
Add license

Reported by:    pkg-fallout

1 files changed, 40 insertions, 0 deletions

diff --git a/biology/cdbfasta/files/patch-gclib_GBase.cpp b/biology/cdbfasta/files/patch-gclib_GBase.cpp
new file mode 100644
index 000000000000..62cb518116f2
--- /dev/null
+++ b/biology/cdbfasta/files/patch-gclib_GBase.cpp
@@ -0,0 +1,40 @@
+--- gclib/GBase.cpp.orig	2023-07-10 09:56:17 UTC
++++ gclib/GBase.cpp
+@@ -234,7 +234,7 @@ bool GstrEq(const char* a, const char* b) {
+ 
+ bool GstrEq(const char* a, const char* b) {
+ 	 if (a==NULL || b==NULL) return false;
+-	 register int i=0;
++	 int i=0;
+ 	 while (a[i]==b[i]) {
+ 		 if (a[i]==0) return true;
+ 		 ++i;
+@@ -244,7 +244,7 @@ bool GstriEq(const char* a, const char* b) {
+ 
+ bool GstriEq(const char* a, const char* b) {
+ 	 if (a==NULL || b==NULL) return false;
+-	 register int i=0;
++	 int i=0;
+ 	 while (tolower((unsigned char)a[i])==tolower((unsigned char)b[i])) {
+ 		 if (a[i]==0) return true;
+ 	 }
+@@ -253,7 +253,7 @@ int Gstricmp(const char* a, const char* b, int n) {
+ 
+ int Gstricmp(const char* a, const char* b, int n) {
+  if (a==NULL || b==NULL) return a==NULL ? -1 : 1;
+- register int ua, ub;
++ int ua, ub;
+  if (n<0) {
+    while ((*a!=0) && (*b!=0)) {
+     ua=tolower((unsigned char)*a);
+@@ -662,8 +662,8 @@ int strhash(const char* str){
+ 
+ //hash function used for strings in GHash
+ int strhash(const char* str){
+-  register int h=0;
+-  register int g;
++  int h=0;
++  int g;
+   while (*str) {
+     h=(h<<4)+*str++;
+     g=h&0xF0000000;