- Convert ports from benchmarks/ and biology/ to new USES=python

Approved by:	portmgr (implicit)

8 files changed, 12 insertions, 20 deletions

diff --git a/benchmarks/pybench/Makefile b/benchmarks/pybench/Makefile
index 5bdd126b489d..37b52dbb59f4 100644
--- a/benchmarks/pybench/Makefile
+++ b/benchmarks/pybench/Makefile
@@ -11,8 +11,7 @@ COMMENT=	Extensible benchmark suite for Python
 
 WRKSRC=		${WRKDIR}/${PORTNAME}
 
-USES=		zip
-USE_PYTHON=	yes
+USES=		python zip
 
 PORTDOCS=	README
 
diff --git a/benchmarks/tsung/Makefile b/benchmarks/tsung/Makefile
index dd19f0eaa4ac..c40a0a65df0f 100644
--- a/benchmarks/tsung/Makefile
+++ b/benchmarks/tsung/Makefile
@@ -15,10 +15,9 @@ BUILD_DEPENDS=	erlc:${PORTSDIR}/lang/erlang
 RUN_DEPENDS=	erl:${PORTSDIR}/lang/erlang
 
 USE_PERL5=	run
-USE_PYTHON_RUN=	yes
 
 GNU_CONFIGURE=	yes
-USES=		gmake perl5 shebangfix
+USES=		gmake perl5 python:run shebangfix
 SHEBANG_FILES=	src/*.pl.in src/tsung-plotter/tsung/tsung.py
 
 PLIST_SUB=	PORTVERSION=${PORTVERSION}
diff --git a/biology/py-biopython/Makefile b/biology/py-biopython/Makefile
index 6e4595f8ea01..8ee594faff6c 100644
--- a/biology/py-biopython/Makefile
+++ b/biology/py-biopython/Makefile
@@ -14,9 +14,8 @@ COMMENT=	Collection of Python modules for bioinformatics
 BUILD_DEPENDS=	${PYNUMPY}
 RUN_DEPENDS=	${PYNUMPY}
 
-USE_PYTHON=	2
-USE_PYDISTUTILS=	yes
-PYDISTUTILS_AUTOPLIST=	yes
+USES=		python:2
+USE_PYTHON=	distutils autoplist
 
 .if !defined(WITHOUT_REPORTLAB)
 RUN_DEPENDS+=	${PYTHON_PKGNAMEPREFIX}reportlab1>0:${PORTSDIR}/print/py-reportlab1
diff --git a/biology/pycogent/Makefile b/biology/pycogent/Makefile
index 576a2a4da6d6..4d4b6e57f877 100644
--- a/biology/pycogent/Makefile
+++ b/biology/pycogent/Makefile
@@ -20,9 +20,7 @@ BUILD_DEPENDS=	${PYNUMPY} \
 		${PYTHON_PKGNAMEPREFIX}sqlalchemy06>=0.5:${PORTSDIR}/databases/py-sqlalchemy06
 RUN_DEPENDS:=	${BUILD_DEPENDS}
 
-USE_PYTHON=		yes
-USE_PYDISTUTILS=	yes
-PYDISTUTILS_PKGNAME=	cogent
-PYDISTUTILS_AUTOPLIST=	yes
+USES=		python
+USE_PYTHON=	distutils autoplist
 
 .include <bsd.port.mk>
diff --git a/biology/pyfasta/Makefile b/biology/pyfasta/Makefile
index 3ba4851e29fc..2c7d49cd2532 100644
--- a/biology/pyfasta/Makefile
+++ b/biology/pyfasta/Makefile
@@ -15,8 +15,7 @@ LICENSE=	MIT
 BUILD_DEPENDS=	${PYNUMPY}
 RUN_DEPENDS:=	${BUILD_DEPENDS}
 
-USE_PYTHON=		yes
-USE_PYDISTUTILS=	yes
-PYDISTUTILS_AUTOPLIST=	yes
+USES=		python
+USE_PYTHON=	distutils autoplist
 
 .include <bsd.port.mk>
diff --git a/biology/python-nexus/Makefile b/biology/python-nexus/Makefile
index 3cf32922ea01..d17e8211d2e4 100644
--- a/biology/python-nexus/Makefile
+++ b/biology/python-nexus/Makefile
@@ -10,8 +10,7 @@ MASTER_SITES=	CHEESESHOP
 MAINTAINER=	wen@FreeBSD.org
 COMMENT=	Generic nexus file format reader for python
 
-USE_PYTHON=		yes
-USE_PYDISTUTILS=	yes
-PYDISTUTILS_AUTOPLIST=	yes
+USES=		python
+USE_PYTHON=	distutils autoplist
 
 .include <bsd.port.mk>
diff --git a/biology/seqan/Makefile b/biology/seqan/Makefile
index 2c56f9c1b52a..a2094f638a0b 100644
--- a/biology/seqan/Makefile
+++ b/biology/seqan/Makefile
@@ -16,9 +16,8 @@ LICENSE_COMB=	multi
 LICENSE_FILE_BSD=${WRKSRC}/seqan/LICENSE
 LICENSE_FILE_GPLv3=${WRKSRC}/apps/LICENSE
 
-USES=		cmake:outsource zip
+USES=		cmake:outsource python:build zip
 CMAKE_SOURCE_PATH=${WRKSRC}/cmake
-USE_PYTHON_BUILD=yes
 MAKE_JOB_SAFE=	yes
 
 SUB_FILES=	pkg-message
diff --git a/biology/velvet/Makefile b/biology/velvet/Makefile
index 1b25da738a44..200cf9f0a3cc 100644
--- a/biology/velvet/Makefile
+++ b/biology/velvet/Makefile
@@ -43,7 +43,7 @@ PERLMOD_FILES=	contrib/VelvetOptimiser-2.2.4/VelvetOpt/Assembly.pm \
 		contrib/VelvetOptimiser-2.2.4/VelvetOpt/hwrap.pm
 
 .if !defined(WITHOUT_PYTHON)
-USE_PYTHON=	yes
+USES+=		python
 SHEBANG_FILES+=	contrib/AssemblyAssembler1.3/AssemblyAssembler1.3.py
 .endif