diff options
author | Tobias C. Berner <tcberner@FreeBSD.org> | 2019-03-16 21:55:51 +0000 |
---|---|---|
committer | Tobias C. Berner <tcberner@FreeBSD.org> | 2019-03-16 21:55:51 +0000 |
commit | 369eb054b0edf196641e8706f3f6fcd77788f690 (patch) | |
tree | d44bab2e528ec5663705a59ae511ea0a4e027206 /science/openstructure | |
parent | x11-themes/qtcurve: remove qt4 slave (Qt4 deprecation) (diff) |
Qt4 deprecation: Remove Qt4 and its consumes.
2019-03-15 accessibility/qt4-accessible: Qt4 has been EOL since december 2015
2019-03-15 astro/qlandkartegt: Qt4 has been EOL since december 2015
2019-03-15 astro/stellarium-qt4: Qt4 has been EOL since december 2015
2019-03-15 astro/xglobe: Qt4 has been EOL since december 2015
2019-03-15 audio/acoustid-fingerprinter: Qt4 has been EOL since december 2015
2019-03-15 audio/cueplayer: Qt4 has been EOL since december 2015
2019-03-15 audio/esperanza: Qt4 has been EOL since december 2015
2019-03-15 audio/lastfm-desktop: Qt4 has been EOL since december 2015
2019-03-15 audio/minitunes: Qt4 has been EOL since december 2015
2019-03-15 audio/mixxx20: Qt4 has been EOL since december 2015
2019-03-15 audio/mumble: Qt4 has been EOL since december 2015
2019-03-15 audio/murmur: Qt4 has been EOL since december 2015
2019-03-15 audio/puddletag: Qt4 has been EOL since december 2015
2019-03-15 audio/qmpdclient: Qt4 has been EOL since december 2015
2019-03-15 audio/skype-call-recorder: Qt4 has been EOL since december 2015
2019-03-15 audio/virtual_oss_ctl: Qt4 has been EOL since december 2015
2019-03-15 biology/clustalx: Qt4 has been EOL since december 2015
2019-03-15 cad/klayout: Qt4 has been EOL since december 2015
2019-03-15 cad/layouteditor: Qt4 has been EOL since december 2015
2019-03-15 cad/leocad: Qt4 has been EOL since december 2015
2019-03-15 cad/meshlab: Qt4 has been EOL since december 2015
2019-03-15 cad/qfsm: Qt4 has been EOL since december 2015
2019-03-15 cad/qucs: Qt4 has been EOL since december 2015
2019-03-15 chinese/gcin-qt4: Qt4 has been EOL since december 2015
2019-03-15 chinese/qt4-codecs-cn: Qt4 has been EOL since december 2015
2019-03-15 chinese/qt4-codecs-tw: Qt4 has been EOL since december 2015
2019-03-15 chinese/qterm: Qt4 has been EOL since december 2015
2019-03-15 comms/dabstick-radio: Qt4 has been EOL since december 2015
2019-03-15 comms/hamfax: Qt4 has been EOL since december 2015
2019-03-15 comms/linpsk: Qt4 has been EOL since december 2015
2019-03-15 databases/py-qt4-sql: Qt4 has been EOL since december 2015
2019-03-15 databases/qt4-ibase-plugin: Qt4 has been EOL since december 2015
2019-03-15 databases/qt4-mysql-plugin: Qt4 has been EOL since december 2015
2019-03-15 databases/qt4-odbc-plugin: Qt4 has been EOL since december 2015
2019-03-15 databases/qt4-pgsql-plugin: Qt4 has been EOL since december 2015
2019-03-15 databases/qt4-sql: Qt4 has been EOL since december 2015
2019-03-15 databases/qt4-sqlite-plugin: Qt4 has been EOL since december 2015
2019-03-15 databases/qt4-sqlite3-plugin: Qt4 has been EOL since december 2015
2019-03-15 databases/sqliteman: Qt4 has been EOL since december 2015
2019-03-15 databases/tora: Qt4 has been EOL since december 2015
2019-03-15 deskutils/cdcat: Qt4 has been EOL since december 2015
2019-03-15 deskutils/fbreader: Qt4 has been EOL since december 2015
2019-03-15 deskutils/launchy: Qt4 has been EOL since december 2015
2019-03-15 deskutils/qorganizer: Qt4 has been EOL since december 2015
2019-03-15 deskutils/qrfcview: Qt4 has been EOL since december 2015
2019-03-15 deskutils/qtm: Qt4 has been EOL since december 2015
2019-03-15 deskutils/tuxcards: Qt4 has been EOL since december 2015
2019-03-15 deskutils/vym: Qt4 has been EOL since december 2015
2019-03-15 devel/apiextractor: Qt4 has been EOL since december 2015
2019-03-15 devel/automoc4: Qt4 has been EOL since december 2015
2019-03-15 devel/edb: Qt4 has been EOL since december 2015
2019-03-15 devel/generatorrunner: Qt4 has been EOL since december 2015
2019-03-15 devel/grantlee: Qt4 has been EOL since december 2015
2019-03-15 devel/gwenhywfar-qt4: Qt4 has been EOL since december 2015
2019-03-15 devel/kaptain: Qt4 has been EOL since december 2015
2019-03-15 devel/ninja-ide: Qt4 has been EOL since december 2015
2019-03-12 devel/physfs-devel: is the same as devel/physfs, serving no purpose
2019-03-15 devel/piklab: Qt4 has been EOL since december 2015
2019-03-15 devel/py-qt4: Qt4 has been EOL since december 2015
2019-03-15 devel/py-qt4-assistant: Qt4 has been EOL since december 2015
2019-03-15 devel/py-qt4-core: Qt4 has been EOL since december 2015
2019-03-15 devel/py-qt4-dbus: Qt4 has been EOL since december 2015
2019-03-15 devel/py-qt4-dbussupport: Qt4 has been EOL since december 2015
2019-03-15 devel/py-qt4-declarative: Qt4 has been EOL since december 2015
2019-03-15 devel/py-qt4-designer: Qt4 has been EOL since december 2015
2019-03-15 devel/py-qt4-designerplugin: Qt4 has been EOL since december 2015
2019-03-15 devel/py-qt4-help: Qt4 has been EOL since december 2015
2019-03-15 devel/py-qt4-qscintilla2: Qt4 has been EOL since december 2015
2019-03-15 devel/py-qt4-script: Qt4 has been EOL since december 2015
2019-03-15 devel/py-qt4-scripttools: Qt4 has been EOL since december 2015
2019-03-15 devel/py-qt4-test: Qt4 has been EOL since december 2015
2019-03-15 devel/pyside: Qt4 has been EOL since december 2015
2019-03-15 devel/pyside-tools: Qt4 has been EOL since december 2015
2019-03-15 devel/qbzr: Qt4 has been EOL since december 2015
2019-03-15 devel/qct: Qt4 has been EOL since december 2015
2019-03-15 devel/qdevelop: Qt4 has been EOL since december 2015
2019-03-15 devel/qprog: Qt4 has been EOL since december 2015
2019-03-15 devel/qross: Qt4 has been EOL since december 2015
2019-03-15 devel/qscintilla2: Qt4 has been EOL since december 2015
2019-03-15 devel/qscintilla2-designerplugin: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-assistant: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-assistant-adp: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-corelib: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-dbus: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-designer: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-help-tools: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-libqtassistantclient: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-linguist: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-linguisttools: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-makeqpf: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-moc: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-porting: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-qdbusviewer: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-qdoc3: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-qmake: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-qmlviewer: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-qt3support: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-qtsolutions-singleapplication: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-qtsolutions-soap: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-qvfb: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-rcc: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-script: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-scripttools: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-testlib: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-uic: Qt4 has been EOL since december 2015
2019-03-15 devel/qt4-uic3: Qt4 has been EOL since december 2015
2019-03-15 devel/qtscriptgenerator: Qt4 has been EOL since december 2015
2019-03-15 devel/shiboken: Qt4 has been EOL since december 2015
2019-03-15 devel/subcommander2: Qt4 has been EOL since december 2015
2019-03-15 devel/universalindentgui: Qt4 has been EOL since december 2015
2019-03-15 editors/leo: Qt4 has been EOL since december 2015
2019-03-15 editors/lfhex: Qt4 has been EOL since december 2015
2019-03-15 editors/plume-creator-devel: Qt4 has been EOL since december 2015
2019-03-15 editors/textroom: Qt4 has been EOL since december 2015
2019-03-15 editors/yzis: Qt4 has been EOL since december 2015
2019-03-15 emulators/dboxfe: Qt4 has been EOL since december 2015
2019-03-15 emulators/q4wine: Qt4 has been EOL since december 2015
2019-03-15 emulators/qtemu: Qt4 has been EOL since december 2015
2019-03-15 emulators/swine: Qt4 has been EOL since december 2015
2019-03-15 finance/alkimia-qt4: Qt4 has been EOL since december 2015
2019-03-15 finance/bitcoin-armory: Qt4 has been EOL since december 2015
2019-03-15 finance/qhacc: Qt4 has been EOL since december 2015
2019-03-15 ftp/scythia: Qt4 has been EOL since december 2015
2019-03-15 games/bubble-chains: Qt4 has been EOL since december 2015
2019-03-15 games/capicity: Qt4 has been EOL since december 2015
2019-03-15 games/capitalism: Qt4 has been EOL since december 2015
2019-03-15 games/flukz: Qt4 has been EOL since december 2015
2019-03-15 games/goldencheetah: Qt4 has been EOL since december 2015
2019-03-15 games/jag: Qt4 has been EOL since december 2015
2019-03-15 games/kardsgt: Qt4 has been EOL since december 2015
2019-03-15 games/kcheckers: Qt4 has been EOL since december 2015
2019-03-15 games/openpref: Qt4 has been EOL since december 2015
2019-03-15 games/pokerth: Qt4 has been EOL since december 2015
2019-03-15 games/qgo: Qt4 has been EOL since december 2015
2019-03-15 games/qtads: Qt4 has been EOL since december 2015
2019-03-15 games/quackle: Qt4 has been EOL since december 2015
2019-03-15 games/spellathon: Qt4 has been EOL since december 2015
2019-03-15 games/sudoku-sensei: Qt4 has been EOL since december 2015
2019-03-15 games/tbe: Qt4 has been EOL since december 2015
2019-03-15 games/xptools: Qt4 has been EOL since december 2015
2019-03-15 german/tipp10: Qt4 has been EOL since december 2015
2019-03-15 graphics/appleseed: Qt4 has been EOL since december 2015
2019-03-15 graphics/aqsis: Qt4 has been EOL since december 2015
2019-03-15 graphics/autoq3d: Qt4 has been EOL since december 2015
2019-03-15 graphics/burplex: Qt4 has been EOL since december 2015
2019-03-15 graphics/darknock: Qt4 has been EOL since december 2015
2019-03-15 graphics/djview4-qt4: Qt4 has been EOL since december 2015
2019-03-15 graphics/easypaint: Qt4 has been EOL since december 2015
2019-03-15 graphics/eos-movrec: Qt4 has been EOL since december 2015
2019-03-15 graphics/gle-graphics: Qt4 has been EOL since december 2015
2019-03-15 graphics/lprof-devel: Qt4 has been EOL since december 2015
2019-03-15 graphics/luminance: Qt4 has been EOL since december 2015
2019-03-15 graphics/luxrender: Qt4 has been EOL since december 2015
2019-03-15 graphics/luxrender14: Qt4 has been EOL since december 2015
2019-03-15 graphics/meshviewer: Qt4 has been EOL since december 2015
2019-03-15 graphics/natron: Qt4 has been EOL since december 2015
2019-03-15 graphics/oyranos: Qt4 has been EOL since december 2015
2019-03-15 graphics/pencil: Qt4 has been EOL since december 2015
2019-03-15 graphics/prison: Qt4 has been EOL since december 2015
2019-03-15 graphics/py-qt4-svg: Qt4 has been EOL since december 2015
2019-03-15 graphics/qt4-iconengines: Qt4 has been EOL since december 2015
2019-03-15 graphics/qt4-imageformats: Qt4 has been EOL since december 2015
2019-03-15 graphics/qt4-opengl: Qt4 has been EOL since december 2015
2019-03-15 graphics/qt4-pixeltool: Qt4 has been EOL since december 2015
2019-03-15 graphics/qt4-svg: Qt4 has been EOL since december 2015
2019-03-15 graphics/qxv: Qt4 has been EOL since december 2015, qxv is unmaintained
2019-03-15 graphics/scantailor: Qt4 has been EOL since december 2015
2019-03-15 graphics/seexpr: Qt4 has been EOL since december 2015
2019-03-15 graphics/smillaenlarger: Qt4 has been EOL since december 2015
2019-03-15 graphics/structuresynth: Qt4 has been EOL since december 2015
2019-03-15 graphics/yagf: Qt4 has been EOL since december 2015
2019-03-15 japanese/qt4-codecs-jp: Qt4 has been EOL since december 2015
2019-03-15 korean/qt4-codecs-kr: Qt4 has been EOL since december 2015
2019-03-15 mail/qgmailnotifier: Qt4 has been EOL since december 2015
2019-03-15 math/qtiplot: Qt4 has been EOL since december 2015
2019-03-15 math/qtoctave: Qt4 has been EOL since december 2015
2019-03-15 math/qwtplot3d-qt4: Qt4 has been EOL since december 2015
2019-03-15 misc/py-qt4-demo: Qt4 has been EOL since december 2015
2019-03-15 misc/py-qt4-doc: Qt4 has been EOL since december 2015
2019-03-15 misc/qmetro: Qt4 has been EOL since december 2015
2019-03-15 misc/qt4-doc: Qt4 has been EOL since december 2015
2019-03-15 misc/qt4-l10n: Qt4 has been EOL since december 2015
2019-03-15 misc/qt4-qtconfig: Qt4 has been EOL since december 2015
2019-03-15 misc/qt4-qtdemo: Qt4 has been EOL since december 2015
2019-03-15 misc/saaghar: Qt4 has been EOL since december 2015
2019-03-15 multimedia/2mandvd: Qt4 has been EOL since december 2015
2019-03-15 multimedia/abby: Qt4 has been EOL since december 2015
2019-03-15 multimedia/avidemux-qt4: Qt4 has been EOL since december 2015
2019-03-15 multimedia/gstreamer-qt4: Qt4 has been EOL since december 2015
2019-03-15 multimedia/mediadownloader: Qt4 has been EOL since december 2015
2019-03-15 multimedia/mlt-qt4: Qt4 has been EOL since december 2015
2019-03-15 multimedia/phonon-xine: Qt4 has been EOL since december 2015
2019-03-15 multimedia/py-qt4-multimedia: Qt4 has been EOL since december 2015
2019-03-15 multimedia/py-qt4-phonon: Qt4 has been EOL since december 2015
2019-03-15 multimedia/qmmp: Qt4 has been EOL since december 2015
2019-03-15 multimedia/qmmp-plugin-pack: Qt4 has been EOL since december 2015
2019-03-15 multimedia/qt4-mobility: Qt4 has been EOL since december 2015
2019-03-15 multimedia/qt4-multimedia: Qt4 has been EOL since december 2015
2019-03-15 multimedia/umplayer: Qt4 has been EOL since december 2015
2019-03-15 net/avahi-qt4: Qt4 has been EOL since december 2015
2019-03-15 net/cagibi: Qt4 has been EOL since december 2015
2019-03-15 net/hupnp: Qt4 has been EOL since december 2015
2019-03-15 net/ostinato: Qt4 has been EOL since december 2015
2019-03-15 net/py-qt4-network: Qt4 has been EOL since december 2015
2019-03-15 net/qjsonrpc: Qt4 has been EOL since december 2015
2019-03-15 net/qoauth: Qt4 has been EOL since december 2015
2019-03-15 net/qt4-network: Qt4 has been EOL since december 2015
2019-03-15 net/qtweetlib: Qt4 has been EOL since december 2015
2019-03-15 net-im/libjreen: Qt4 has been EOL since december 2015
2019-03-15 net-im/psimedia: Qt4 has been EOL since december 2015
2019-03-15 net-im/ramblercontacts: Qt4 has been EOL since december 2015
2019-03-15 net-im/telepathy-logger-qt4: Qt4 has been EOL since december 2015
2019-03-15 net-im/turpial: Qt4 has been EOL since december 2015
2019-03-15 net-im/vacuum-im: Qt4 has been EOL since december 2015
2019-03-15 net-mgmt/nagiosagent: Qt4 has been EOL since december 2015
2019-03-15 net-mgmt/qkismet: Qt4 has been EOL since december 2015
2019-03-15 net-p2p/bitmessage: Qt4 has been EOL since december 2015
2019-03-15 net-p2p/eiskaltdcpp-qt: Qt4 has been EOL since december 2015
2019-03-15 net-p2p/valknut: Qt4 has been EOL since december 2015
2019-03-15 polish/qfaktury: Qt4 has been EOL since december 2015
2019-03-15 print/kpdftool: Qt4 has been EOL since december 2015
2019-03-15 print/scribus: Qt4 has been EOL since december 2015
2019-03-15 science/MOOSE-neural-simulator: Qt4 has been EOL since december 2015
2019-03-15 science/avogadro: Qt4 has been EOL since december 2015
2019-03-15 science/openstructure: Qt4 has been EOL since december 2015
2019-03-15 science/py-veusz: Qt4 has been EOL since december 2015
2019-03-15 science/qtresistors: Qt4 has been EOL since december 2015
2019-03-15 security/keepassx2: Qt4 has been EOL since december 2015
2019-03-15 security/kqoauth: Qt4 has been EOL since december 2015
2019-03-15 security/tpmmanager: Qt4 has been EOL since december 2015
2019-03-15 sysutils/android-file-transfer-qt4: Qt4 has been EOL since december 2015
2019-03-15 sysutils/bacula9-bat: Qt4 has been EOL since december 2015
2019-03-15 sysutils/bareos-traymonitor: Qt4 has been EOL since december 2015
2019-03-15 sysutils/bareos16-bat: Qt4 has been EOL since december 2015
2019-03-15 sysutils/bareos16-traymonitor: Qt4 has been EOL since december 2015
2019-03-15 sysutils/policykit-qt: Qt4 has been EOL since december 2015
2019-03-15 sysutils/qpxtool: Qt4 has been EOL since december 2015
2019-03-15 sysutils/qsynergy: Qt4 has been EOL since december 2015
2019-03-15 sysutils/qzeitgeist: Qt4 has been EOL since december 2015
2019-03-15 sysutils/searchmonkey: Qt4 has been EOL since december 2015
2019-03-15 sysutils/unetbootin: Qt4 has been EOL since december 2015
2019-03-15 textproc/beediff: Qt4 has been EOL since december 2015
2019-03-15 textproc/dixit: Qt4 has been EOL since december 2015
2019-03-15 textproc/goldendict: Qt4 has been EOL since december 2015
2019-03-15 textproc/ibus-qt: Qt4 has been EOL since december 2015
2019-03-15 textproc/py-qt4-xml: Qt4 has been EOL since december 2015
2019-03-15 textproc/py-qt4-xmlpatterns: Qt4 has been EOL since december 2015
2019-03-15 textproc/qt4-clucene: Qt4 has been EOL since december 2015
2019-03-15 textproc/qt4-xml: Qt4 has been EOL since december 2015
2019-03-15 textproc/qt4-xmlpatterns: Qt4 has been EOL since december 2015
2019-03-15 textproc/qt4-xmlpatterns-tool: Qt4 has been EOL since december 2015
2019-03-15 textproc/scim-bridge-qt4: Qt4 has been EOL since december 2015
2019-03-15 textproc/uim-qt4: Qt4 has been EOL since december 2015
2019-03-15 textproc/xxdiff: Qt4 has been EOL since december 2015
2019-03-15 www/aria2fe: Qt4 has been EOL since december 2015
2019-03-15 www/cutycapt: Qt4 has been EOL since december 2015
2019-03-15 www/py-qt4-webkit: Qt4 has been EOL since december 2015
2019-03-15 www/qt4-webkit: Qt4 has been EOL since december 2015
2019-03-15 www/qupzilla-qt4: Qt4 has been EOL since december 2015
2019-03-15 x11/leechcraft: Qt4 has been EOL since december 2015
2019-03-15 x11/py-qt4-opengl: Qt4 has been EOL since december 2015
2019-03-15 x11/qimageblitz: Qt4 has been EOL since december 2015
2019-03-15 x11/qt4-graphicssystems-opengl: Qt4 has been EOL since december 2015
2019-03-15 x11/qt4-inputmethods: Qt4 has been EOL since december 2015
2019-03-15 x11/qxkb: Qt4 has been EOL since december 2015
2019-03-15 x11-fonts/fontmatrix: Qt4 has been EOL since december 2015
2019-03-15 x11-themes/qt4-style-float: Qt4 has been EOL since december 2015
2019-03-15 x11-themes/qt4-style-phase: Qt4 has been EOL since december 2015
2019-03-15 x11-themes/qt4-style-quantumstyle: Qt4 has been EOL since december 2015
2019-03-15 x11-themes/qtcurve-qt4: Qt4 has been EOL since december 2015
2019-03-15 x11-toolkits/attica: Qt4 has been EOL since december 2015
2019-03-15 x11-toolkits/py-qt4-gui: Qt4 has been EOL since december 2015
2019-03-15 x11-toolkits/qt4-declarative: Qt4 has been EOL since december 2015
2019-03-15 x11-toolkits/qt4-gui: Qt4 has been EOL since december 2015
2019-03-15 x11-toolkits/qt4pas: Qt4 has been EOL since december 2015
2019-03-15 x11-toolkits/qwt5: Qt4 has been EOL since december 2015
2019-03-15 x11-toolkits/qwt5-designerplugin: Qt4 has been EOL since december 2015
2019-03-15 x11-toolkits/soqt: Qt4 has been EOL since december 2015
2019-03-15 x11-wm/qlwm: Qt4 has been EOL since december 2015
Approved by: portmgr (implicit)
Diffstat (limited to 'science/openstructure')
15 files changed, 0 insertions, 1194 deletions
diff --git a/science/openstructure/Makefile b/science/openstructure/Makefile deleted file mode 100644 index a2e49575d88c..000000000000 --- a/science/openstructure/Makefile +++ /dev/null @@ -1,45 +0,0 @@ -# $FreeBSD$ - -PORTNAME= openstructure -DISTVERSION= 1.7.1 -PORTREVISION= 10 -CATEGORIES= science -MASTER_SITES= https://git.scicore.unibas.ch/schwede/${PORTNAME}/repository/${DISTVERSION}/archive.tar.gz?dummy=/ - -MAINTAINER= yuri@FreeBSD.org -COMMENT= Molecular modelling and visualization environment - -LICENSE= LGPL3 -LICENSE_FILE= ${WRKSRC}/LICENSE.txt - -DEPRECATED= Qt4 has been EOL since december 2015 # the upstream promised to support Qt5 in the next release -EXPIRATION_DATE= 2019-03-15 - -BUILD_DEPENDS= fftw3>0:math/fftw3 -LIB_DEPENDS= libboost_filesystem.so:devel/boost-libs \ - libfftw3f.so:math/fftw3-float \ - libpng16.so:graphics/png \ - libtiff.so:graphics/tiff \ - ${PY_BOOST} -RUN_DEPENDS= ${PYNUMPY} \ - bash:shells/bash - -USES= cmake eigen:3 gl python:2.7 pyqt:4 qt:4 shebangfix # I asked the upstream to make it python3-compatible -SHEBANG_FILES= scripts/dng.in scripts/ost.in scripts/ost_config.in -USE_QT= corelib gui network opengl xml qmake_build moc_build rcc_build uic_build -USE_PYQT= core gui -USE_GL= gl glu -USE_LDCONFIG= yes - -BINARY_ALIAS= python=${PYTHON_CMD} -CMAKE_ARGS= -DPYTHON_INCLUDE_PATH=${PYTHON_INCLUDEDIR} \ - -DPYTHON_LIBRARIES=${PYTHON_LIBDIR} \ - -DFREEBSD_BOOST_PYTHON_COMPONENT=python${PYTHON_VER:S/.//} \ - -DFREEBSD_PYTHON_LIBRARY=python${PYTHON_VER} - -USE_CXXSTD=c++98 # c++98 is needed until 1.8.0 to prevent C++ code build breakage - -post-extract: - @${MV} ${WRKSRC}-* ${WRKSRC} - -.include <bsd.port.mk> diff --git a/science/openstructure/distinfo b/science/openstructure/distinfo deleted file mode 100644 index 158018f0973f..000000000000 --- a/science/openstructure/distinfo +++ /dev/null @@ -1,3 +0,0 @@ -TIMESTAMP = 1531473520 -SHA256 (openstructure-1.7.1.tar.gz) = a3715a921e3f992ae66ebdc19e6bcb161292bd83ac1302174ff33dc1fc98db50 -SIZE (openstructure-1.7.1.tar.gz) = 59275493 diff --git a/science/openstructure/files/patch-cmake__support_CopyDependencies.cmake b/science/openstructure/files/patch-cmake__support_CopyDependencies.cmake deleted file mode 100644 index fe47164623db..000000000000 --- a/science/openstructure/files/patch-cmake__support_CopyDependencies.cmake +++ /dev/null @@ -1,15 +0,0 @@ ---- cmake_support/CopyDependencies.cmake.orig 2018-07-09 02:47:08 UTC -+++ cmake_support/CopyDependencies.cmake -@@ -996,10 +996,10 @@ function(copy_python include_path versio - endforeach() - else() - file(COPY ${python_root_dir}/${LIB_DIR}/python${version}/ DESTINATION ${CMAKE_INSTALL_PREFIX}/${LIB_DIR}/python${version} PATTERN "*.pyc" EXCLUDE) -- if("${LIB_DIR}" MATCHES "lib64") -+ if("${LIB_DIR}" MATCHES "lib") - # for 64 bit systems we have to copy the python dir within lib in addition as norarch site packages might get installed there - file(COPY ${python_root_dir}/lib/python${version}/ DESTINATION ${CMAKE_INSTALL_PREFIX}/lib/python${version} PATTERN "*.pyc" EXCLUDE) -- endif("${LIB_DIR}" MATCHES "lib64") -+ endif("${LIB_DIR}" MATCHES "lib") - endif() - file(GLOB py_config_files "${include_path}/pyconfig*.h") - file(COPY ${py_config_files} DESTINATION ${CMAKE_INSTALL_PREFIX}/include/python${version}) diff --git a/science/openstructure/files/patch-cmake__support_FindOPENSTRUCTURE.cmake b/science/openstructure/files/patch-cmake__support_FindOPENSTRUCTURE.cmake deleted file mode 100644 index c18db5597504..000000000000 --- a/science/openstructure/files/patch-cmake__support_FindOPENSTRUCTURE.cmake +++ /dev/null @@ -1,18 +0,0 @@ ---- cmake_support/FindOPENSTRUCTURE.cmake.orig 2018-07-09 03:09:01 UTC -+++ cmake_support/FindOPENSTRUCTURE.cmake -@@ -27,7 +27,7 @@ macro(find_OPENSTRUCTURE OPENSTRUCTURE_R - NAMES ost_${LIB} - HINTS "${PYTHON_ROOT}" - PATH ${OPENSTRUCTURE_ROOT} -- PATH_SUFFIXES lib lib64 -+ PATH_SUFFIXES lib - NO_SYSTEM_ENVIRONMENT_PATH NO_DEFAULT_PATH - ) - if (NOT FOUND_LIB) -@@ -84,4 +84,4 @@ else (OPENSTRUCTURE_FOUND) - if (OPENSTRUCTURE_FIND_REQUIRED) - message(FATAL_ERROR "Could not find OpenStructure") - endif () --endif () -\ No newline at end of file -+endif () diff --git a/science/openstructure/files/patch-cmake__support_FindPython.cmake b/science/openstructure/files/patch-cmake__support_FindPython.cmake deleted file mode 100644 index c9f792a29fa5..000000000000 --- a/science/openstructure/files/patch-cmake__support_FindPython.cmake +++ /dev/null @@ -1,10 +0,0 @@ ---- cmake_support/FindPython.cmake.orig 2018-07-08 23:04:29 UTC -+++ cmake_support/FindPython.cmake -@@ -75,7 +75,6 @@ macro(_find_python_bin PYTHON_ROOT VERSI - NAMES "python${_VERSION_NO_DOTS}" "python${VERSION}" python.exe - HINTS "${PYTHON_ROOT}" - PATH_SUFFIXES bin -- NO_SYSTEM_ENVIRONMENT_PATH NO_DEFAULT_PATH - ) - else() - find_program(PYTHON_BINARY diff --git a/science/openstructure/files/patch-cmake__support_OST.cmake b/science/openstructure/files/patch-cmake__support_OST.cmake deleted file mode 100644 index e88bd1c466d6..000000000000 --- a/science/openstructure/files/patch-cmake__support_OST.cmake +++ /dev/null @@ -1,20 +0,0 @@ ---- cmake_support/OST.cmake.orig 2018-02-27 14:29:54 UTC -+++ cmake_support/OST.cmake -@@ -834,7 +834,7 @@ macro(setup_stage) - check_architecture() - endif() - set (ARCH ${CMAKE_NATIVE_ARCH}) -- if ("${ARCH}" MATCHES "64" AND NOT _UBUNTU_LAYOUT) -+ if ("${ARCH}" MATCHES "64" AND NOT _UBUNTU_LAYOUT AND NOT ${CMAKE_SYSTEM_NAME} MATCHES "FreeBSD") - set(LIB_DIR lib64 ) - set(LIB_STAGE_PATH "${STAGE_DIR}/lib64" ) - else() -@@ -902,7 +902,7 @@ set(_BOOST_MIN_VERSION 1.31) - - macro(setup_boost) - set (Boost_NO_BOOST_CMAKE TRUE) -- find_package(Boost ${_BOOST_MIN_VERSION} COMPONENTS python REQUIRED) -+ find_package(Boost ${_BOOST_MIN_VERSION} COMPONENTS ${FREEBSD_BOOST_PYTHON_COMPONENT} REQUIRED) - set(BOOST_PYTHON_LIBRARIES ${Boost_LIBRARIES}) - set(Boost_LIBRARIES) - find_package(Boost ${_BOOST_MIN_VERSION} diff --git a/science/openstructure/files/patch-modules_base_src_test__utils_compare__files.cc b/science/openstructure/files/patch-modules_base_src_test__utils_compare__files.cc deleted file mode 100644 index ac497f782233..000000000000 --- a/science/openstructure/files/patch-modules_base_src_test__utils_compare__files.cc +++ /dev/null @@ -1,17 +0,0 @@ -Patch for the obvious bug. Reported to the upstream. - ---- modules/base/src/test_utils/compare_files.cc.orig 2018-07-10 05:54:54 UTC -+++ modules/base/src/test_utils/compare_files.cc -@@ -37,8 +37,10 @@ bool compare_files(const String& test, c - } - String test_line, gold_line; - while (true) { -- bool test_end=std::getline(test_stream, test_line) != 0; -- bool gold_end=std::getline(gold_stream, gold_line) != 0; -+ std::getline(test_stream, test_line); -+ std::getline(gold_stream, gold_line); -+ bool test_end=test_stream.eof(); -+ bool gold_end=gold_stream.eof(); - if (!(test_end || gold_end)) { - return true; - } diff --git a/science/openstructure/files/patch-modules_config_base.hh b/science/openstructure/files/patch-modules_config_base.hh deleted file mode 100644 index 5d29060e4768..000000000000 --- a/science/openstructure/files/patch-modules_config_base.hh +++ /dev/null @@ -1,29 +0,0 @@ ---- modules/config/base.hh.orig 2018-07-09 01:41:40 UTC -+++ modules/config/base.hh -@@ -56,22 +56,26 @@ typedef unsigned short Word; - #ifndef round_function - #define round_function - #ifndef round -+#if !defined(__FreeBSD__) - inline Real round( Real d ) - { - return floor(d+Real(0.5)); - } - #endif - #endif -+#endif - - #ifndef rint_function - #define rint_function - #ifndef rint -+#if !defined(__FreeBSD__) - inline Real rint(Real d) - { - return floor(d+Real(0.5)); - } - #endif - #endif -+#endif - - #if _MSC_VER - #pragma warning(disable:4251) diff --git a/science/openstructure/files/patch-modules_db_src_sqlite3.c b/science/openstructure/files/patch-modules_db_src_sqlite3.c deleted file mode 100644 index fe5e4584cc47..000000000000 --- a/science/openstructure/files/patch-modules_db_src_sqlite3.c +++ /dev/null @@ -1,11 +0,0 @@ ---- modules/db/src/sqlite3.c.orig 2018-07-09 00:05:56 UTC -+++ modules/db/src/sqlite3.c -@@ -15341,7 +15341,7 @@ SQLITE_PRIVATE void sqlite3MemSetDefault - ** SQLITE_WITHOUT_ZONEMALLOC symbol is defined. - */ - #include <sys/sysctl.h> --#include <malloc/malloc.h> -+#include <stdlib.h> - #include <libkern/OSAtomic.h> - static malloc_zone_t* _sqliteZone_; - #define SQLITE_MALLOC(x) malloc_zone_malloc(_sqliteZone_, (x)) diff --git a/science/openstructure/files/patch-modules_gfx_src_offscreen__buffer.hh b/science/openstructure/files/patch-modules_gfx_src_offscreen__buffer.hh deleted file mode 100644 index a9594f64ea1f..000000000000 --- a/science/openstructure/files/patch-modules_gfx_src_offscreen__buffer.hh +++ /dev/null @@ -1,11 +0,0 @@ ---- modules/gfx/src/offscreen_buffer.hh.orig 2018-07-09 00:19:53 UTC -+++ modules/gfx/src/offscreen_buffer.hh -@@ -58,7 +58,7 @@ public: - bool IsValid(); - */ - --#if defined(__linux__) -+#if defined(__linux__) || defined(__FreeBSD__) - #if OST_MESA_SUPPORT_ENABLED - #include "impl/mesa_offscreen_buffer.hh" - #else diff --git a/science/openstructure/files/patch-modules_gui_src_CMakeLists.txt b/science/openstructure/files/patch-modules_gui_src_CMakeLists.txt deleted file mode 100644 index 880c10bb0449..000000000000 --- a/science/openstructure/files/patch-modules_gui_src_CMakeLists.txt +++ /dev/null @@ -1,13 +0,0 @@ ---- modules/gui/src/CMakeLists.txt.orig 2018-02-27 14:29:54 UTC -+++ modules/gui/src/CMakeLists.txt -@@ -472,8 +472,9 @@ qt4_wrap_cpp(OST_GOSTY_MOC "gosty.hh" - OPTIONS -DBOOST_TT_HAS_OPERATOR_HPP_INCLUDED - -DBOOST_NO_TEMPLATE_PARTIAL_SPECIALIZATION) - --set(LINK LINK ${BOOST_PROGRAM_OPTIONS_LIBRARIES}) -+set(LINK LINK ${BOOST_PROGRAM_OPTIONS_LIBRARIES} ${FREEBSD_PYTHON_LIBRARY}) - -+link_directories(${CMAKE_INSTALL_PREFIX}/lib) - executable_libexec(NAME gosty SOURCES gosty.cc ${OST_GOSTY_MOC} ${OST_QT_RESOURCE} - DEPENDS_ON ost_gui ${LINK}) - diff --git a/science/openstructure/files/patch-modules_gui_src_gosty.cc b/science/openstructure/files/patch-modules_gui_src_gosty.cc deleted file mode 100644 index de8716c2c00d..000000000000 --- a/science/openstructure/files/patch-modules_gui_src_gosty.cc +++ /dev/null @@ -1,11 +0,0 @@ ---- modules/gui/src/gosty.cc.orig 2018-07-09 03:10:04 UTC -+++ modules/gui/src/gosty.cc -@@ -111,7 +111,7 @@ String setup_python_search_path(const St - #ifdef _MSC_VER - String loc=root+"\\lib\\"+site_pkgs.str()+"\\site-packages"; - #else --# if (defined(__ppc64__) || defined(__x86_64__)) && !defined(__APPLE__) && !OST_UBUNTU_LAYOUT -+# if (defined(__ppc64__) || defined(__x86_64__)) && !defined(__APPLE__) && !OST_UBUNTU_LAYOUT && !defined(__FreeBSD__) - String loc=root+"/lib64/"+site_pkgs.str()+"/site-packages"; - # else - String loc=root+"/lib/"+site_pkgs.str()+"/site-packages"; diff --git a/science/openstructure/files/patch-modules_img_base_src_raster__image_raster__image.cc b/science/openstructure/files/patch-modules_img_base_src_raster__image_raster__image.cc deleted file mode 100644 index 33fc51e38bdb..000000000000 --- a/science/openstructure/files/patch-modules_img_base_src_raster__image_raster__image.cc +++ /dev/null @@ -1,11 +0,0 @@ ---- modules/img/base/src/raster_image/raster_image.cc.orig 2018-07-09 00:06:35 UTC -+++ modules/img/base/src/raster_image/raster_image.cc -@@ -25,7 +25,7 @@ - */ - - #ifndef __APPLE__ --#include <malloc.h> -+#include <stdlib.h> - #endif - #include <cmath> - #include <iostream> diff --git a/science/openstructure/pkg-descr b/science/openstructure/pkg-descr deleted file mode 100644 index 045b43d30f65..000000000000 --- a/science/openstructure/pkg-descr +++ /dev/null @@ -1,17 +0,0 @@ -This project aims to provide an open-source, modular, flexible, molecular -modelling and visualization environment. - -Molecular structures are a central aspect of OpenStructure and a rich -understanding of macromolecular structure datasets with access to atoms, -residues, chains, bonds and torsions is offered. - -Features: -* Intuitive representation of structural subsets, so-called EntityViews, that - can be created with a dedicated query language or constructed manually for - more complex cases. -* Real-time rendering of molecular structures -* Interactive Analysis of Trajectories -* Support for common file formats such as PDB, mmCIF, SDF, PQR -* Read more about molecular structures in OpenStructure - -WWW: https://openstructure.org/ diff --git a/science/openstructure/pkg-plist b/science/openstructure/pkg-plist deleted file mode 100644 index 927af2276c07..000000000000 --- a/science/openstructure/pkg-plist +++ /dev/null @@ -1,963 +0,0 @@ -bin/chemdict_tool -bin/dng -bin/lddt -bin/molck -bin/ost -include/ost/base.hh -include/ost/boost_filesystem_helper.hh -include/ost/config.hh -include/ost/conop/amino_acids.hh -include/ost/conop/compound.hh -include/ost/conop/compound_lib.hh -include/ost/conop/compound_lib_base.hh -include/ost/conop/conop.hh -include/ost/conop/diag.hh -include/ost/conop/heuristic.hh -include/ost/conop/minimal_compound_lib.hh -include/ost/conop/model_check.hh -include/ost/conop/module_config.hh -include/ost/conop/nonstandard.hh -include/ost/conop/processor.hh -include/ost/conop/ring_finder.hh -include/ost/conop/rule_based.hh -include/ost/db/module_config.hh -include/ost/db/sqlite3.h -include/ost/db/sqlite_conv.hh -include/ost/db/sqlite_wrap.hh -include/ost/dllexport.hh -include/ost/dyn_cast.hh -include/ost/export_helper/generic_property_def.hh -include/ost/export_helper/pair_to_tuple_conv.hh -include/ost/export_helper/vec_to_list_conv.hh -include/ost/fixed_string.hh -include/ost/generic_property.hh -include/ost/geom/aligned_cuboid.hh -include/ost/geom/circular_iterator.hh -include/ost/geom/composite.hh -include/ost/geom/composite2.hh -include/ost/geom/composite2_op.hh -include/ost/geom/composite3.hh -include/ost/geom/composite3_op.hh -include/ost/geom/composite_op.hh -include/ost/geom/constants.hh -include/ost/geom/def.hh -include/ost/geom/exc.hh -include/ost/geom/export_helper/vector.hh -include/ost/geom/geom.hh -include/ost/geom/mat.hh -include/ost/geom/mat2.hh -include/ost/geom/mat3.hh -include/ost/geom/mat4.hh -include/ost/geom/module_config.hh -include/ost/geom/point_cloud.hh -include/ost/geom/quat.hh -include/ost/geom/transform.hh -include/ost/geom/vec.hh -include/ost/geom/vec2.hh -include/ost/geom/vec3.hh -include/ost/geom/vec4.hh -include/ost/geom/vec_mat_predicates.hh -include/ost/geom/vecmat2_op.hh -include/ost/geom/vecmat3_op.hh -include/ost/geom/vecmat4_op.hh -include/ost/geom/vecmat_op.hh -include/ost/gfx/bitmap_io.hh -include/ost/gfx/collada_exporter.hh -include/ost/gfx/color.hh -include/ost/gfx/color_ops/basic_gradient_color_op.hh -include/ost/gfx/color_ops/by_chain_color_op.hh -include/ost/gfx/color_ops/by_element_color_op.hh -include/ost/gfx/color_ops/color_op.hh -include/ost/gfx/color_ops/entity_view_color_op.hh -include/ost/gfx/color_ops/gradient_color_op.hh -include/ost/gfx/color_ops/gradient_level_color_op.hh -include/ost/gfx/color_ops/map_handle_color_op.hh -include/ost/gfx/color_ops/uniform_color_op.hh -include/ost/gfx/entity.hh -include/ost/gfx/entity_fw.hh -include/ost/gfx/exporter.hh -include/ost/gfx/exporter_fw.hh -include/ost/gfx/gfx.hh -include/ost/gfx/gfx_fw.hh -include/ost/gfx/gfx_node.hh -include/ost/gfx/gfx_node_fw.hh -include/ost/gfx/gfx_node_visitor.hh -include/ost/gfx/gfx_object.hh -include/ost/gfx/gfx_object_base.hh -include/ost/gfx/gfx_object_fw.hh -include/ost/gfx/gfx_prim.hh -include/ost/gfx/gfx_test_object.hh -include/ost/gfx/gl_helper.hh -include/ost/gfx/gl_include.hh -include/ost/gfx/glext_include.hh -include/ost/gfx/glwin_base.hh -include/ost/gfx/gost_exporter.hh -include/ost/gfx/gradient.hh -include/ost/gfx/gradient_manager.hh -include/ost/gfx/impl/backbone_trace.hh -include/ost/gfx/impl/cartoon_renderer.hh -include/ost/gfx/impl/connect_renderer_base.hh -include/ost/gfx/impl/cpk_renderer.hh -include/ost/gfx/impl/custom_renderer.hh -include/ost/gfx/impl/debug_renderer.hh -include/ost/gfx/impl/entity_detail.hh -include/ost/gfx/impl/entity_renderer.hh -include/ost/gfx/impl/entity_renderer_fw.hh -include/ost/gfx/impl/fast_spheres.hh -include/ost/gfx/impl/glx_offscreen_buffer.hh -include/ost/gfx/impl/line_trace_renderer.hh -include/ost/gfx/impl/map_iso_gen.hh -include/ost/gfx/impl/map_iso_gen_s.hh -include/ost/gfx/impl/map_iso_spec.hh -include/ost/gfx/impl/map_octree.hh -include/ost/gfx/impl/mapped_property.hh -include/ost/gfx/impl/octree_isocont.hh -include/ost/gfx/impl/simple_renderer.hh -include/ost/gfx/impl/sline_renderer.hh -include/ost/gfx/impl/tabulated_trig.hh -include/ost/gfx/impl/trace_renderer.hh -include/ost/gfx/impl/trace_renderer_base.hh -include/ost/gfx/input.hh -include/ost/gfx/map_handle_color_op.hh -include/ost/gfx/map_iso.hh -include/ost/gfx/map_iso_prop.hh -include/ost/gfx/map_slab.hh -include/ost/gfx/material.hh -include/ost/gfx/module_config.hh -include/ost/gfx/offscreen_buffer.hh -include/ost/gfx/povray.hh -include/ost/gfx/povray_fw.hh -include/ost/gfx/prim_list.hh -include/ost/gfx/primitives.hh -include/ost/gfx/render_mode.hh -include/ost/gfx/render_options/cartoon_render_options.hh -include/ost/gfx/render_options/cpk_render_options.hh -include/ost/gfx/render_options/custom_render_options.hh -include/ost/gfx/render_options/line_render_options.hh -include/ost/gfx/render_options/line_trace_render_options.hh -include/ost/gfx/render_options/render_options.hh -include/ost/gfx/render_options/simple_render_options.hh -include/ost/gfx/render_options/sline_render_options.hh -include/ost/gfx/render_options/trace_render_options.hh -include/ost/gfx/render_pass.hh -include/ost/gfx/scene.hh -include/ost/gfx/scene_observer.hh -include/ost/gfx/selection.hh -include/ost/gfx/surface.hh -include/ost/gfx/symmetry_node.hh -include/ost/gfx/texture.hh -include/ost/gfx/vertex_array.hh -include/ost/gfx/vertex_array_helper.hh -include/ost/gui/admin.hh -include/ost/gui/data_viewer/argand.hh -include/ost/gui/data_viewer/data_viewer.hh -include/ost/gui/data_viewer/data_viewer_panel.hh -include/ost/gui/data_viewer/data_viewer_panel_base.hh -include/ost/gui/data_viewer/draw_overlay.hh -include/ost/gui/data_viewer/drawing_functions.hh -include/ost/gui/data_viewer/fft_panel.hh -include/ost/gui/data_viewer/img2qt.hh -include/ost/gui/data_viewer/info_panel.hh -include/ost/gui/data_viewer/mask_overlay.hh -include/ost/gui/data_viewer/null_overlay.hh -include/ost/gui/data_viewer/overlay.hh -include/ost/gui/data_viewer/overlay_base.hh -include/ost/gui/data_viewer/overlay_base_fw.hh -include/ost/gui/data_viewer/overlay_manager.hh -include/ost/gui/data_viewer/overlay_manager_fw.hh -include/ost/gui/data_viewer/overlay_manager_gui.hh -include/ost/gui/data_viewer/overlay_manager_observer.hh -include/ost/gui/data_viewer/pointlist_overlay.hh -include/ost/gui/data_viewer/pointlist_overlay_base.hh -include/ost/gui/data_viewer/strategies.hh -include/ost/gui/data_viewer/strategies_fw.hh -include/ost/gui/data_viewer/viewer_normalizer.hh -include/ost/gui/dock_widget.hh -include/ost/gui/file_browser.hh -include/ost/gui/file_loader.hh -include/ost/gui/file_type_dialog.hh -include/ost/gui/file_viewer.hh -include/ost/gui/gl_canvas.hh -include/ost/gui/gl_win.hh -include/ost/gui/gosty_app.hh -include/ost/gui/main.hh -include/ost/gui/main_area.hh -include/ost/gui/main_window.hh -include/ost/gui/messages/log_reader.hh -include/ost/gui/messages/message_box_widget.hh -include/ost/gui/messages/message_widget.hh -include/ost/gui/module_config.hh -include/ost/gui/panels/bottom_bar.hh -include/ost/gui/panels/button_bar.hh -include/ost/gui/panels/button_box.hh -include/ost/gui/panels/drop_box.hh -include/ost/gui/panels/event_button.hh -include/ost/gui/panels/panel_bar.hh -include/ost/gui/panels/panel_bar_widget_holder.hh -include/ost/gui/panels/panel_manager.hh -include/ost/gui/panels/panel_widget_container.hh -include/ost/gui/panels/side_bar.hh -include/ost/gui/panels/splitter_panel_bar.hh -include/ost/gui/panels/tabbed_panel_bar.hh -include/ost/gui/perspective.hh -include/ost/gui/python_shell/completer_base.hh -include/ost/gui/python_shell/dir_model.hh -include/ost/gui/python_shell/gutter.hh -include/ost/gui/python_shell/main_thread_runner.hh -include/ost/gui/python_shell/output_redirector.hh -include/ost/gui/python_shell/path_completer.hh -include/ost/gui/python_shell/python_completer.hh -include/ost/gui/python_shell/python_context_parser.hh -include/ost/gui/python_shell/python_interpreter.hh -include/ost/gui/python_shell/python_interpreter_worker.hh -include/ost/gui/python_shell/python_shell.hh -include/ost/gui/python_shell/python_shell_fw.hh -include/ost/gui/python_shell/python_shell_text_document_layout.hh -include/ost/gui/python_shell/python_shell_widget.hh -include/ost/gui/python_shell/python_syntax_highlighter.hh -include/ost/gui/python_shell/python_tokenizer.hh -include/ost/gui/python_shell/shell_history.hh -include/ost/gui/python_shell/state.hh -include/ost/gui/python_shell/state_machine.hh -include/ost/gui/python_shell/text_logger.hh -include/ost/gui/python_shell/transition.hh -include/ost/gui/python_shell/transition_guard.hh -include/ost/gui/scene_menu.hh -include/ost/gui/scene_selection.hh -include/ost/gui/scene_win/context_menu.hh -include/ost/gui/scene_win/current_selection_node.hh -include/ost/gui/scene_win/custom_part_node.hh -include/ost/gui/scene_win/entity_node.hh -include/ost/gui/scene_win/entity_part_node.hh -include/ost/gui/scene_win/gfx_scene_node.hh -include/ost/gui/scene_win/label_node.hh -include/ost/gui/scene_win/render_mode_node.hh -include/ost/gui/scene_win/render_modes_node.hh -include/ost/gui/scene_win/root_node.hh -include/ost/gui/scene_win/scene_node.hh -include/ost/gui/scene_win/scene_win.hh -include/ost/gui/scene_win/scene_win_model.hh -include/ost/gui/sequence_viewer/align_properties_painter.hh -include/ost/gui/sequence_viewer/alignment_view_object.hh -include/ost/gui/sequence_viewer/background_painter.hh -include/ost/gui/sequence_viewer/base_row.hh -include/ost/gui/sequence_viewer/base_view_object.hh -include/ost/gui/sequence_viewer/conservation_painter.hh -include/ost/gui/sequence_viewer/painter.hh -include/ost/gui/sequence_viewer/secstr_row.hh -include/ost/gui/sequence_viewer/seq_secstr_painter.hh -include/ost/gui/sequence_viewer/seq_selection_painter.hh -include/ost/gui/sequence_viewer/seq_text_painter.hh -include/ost/gui/sequence_viewer/sequence_delegate.hh -include/ost/gui/sequence_viewer/sequence_model.hh -include/ost/gui/sequence_viewer/sequence_row.hh -include/ost/gui/sequence_viewer/sequence_search_bar.hh -include/ost/gui/sequence_viewer/sequence_table_view.hh -include/ost/gui/sequence_viewer/sequence_view_object.hh -include/ost/gui/sequence_viewer/sequence_viewer.hh -include/ost/gui/sequence_viewer/tick_painter.hh -include/ost/gui/sequence_viewer/title_row.hh -include/ost/gui/thin_splitter.hh -include/ost/gui/tools/manipulator.hh -include/ost/gui/tools/map_tool.hh -include/ost/gui/tools/measure_tool.hh -include/ost/gui/tools/mouse_event.hh -include/ost/gui/tools/selection_tool.hh -include/ost/gui/tools/tool.hh -include/ost/gui/tools/tool_bar.hh -include/ost/gui/tools/tool_manager.hh -include/ost/gui/tools/tool_option.hh -include/ost/gui/tools/tool_option_group.hh -include/ost/gui/tools/tool_options.hh -include/ost/gui/tools/tool_options_widget.hh -include/ost/gui/tools/tool_options_win.hh -include/ost/gui/widget.hh -include/ost/gui/widget_geom_handler.hh -include/ost/gui/widget_pool.hh -include/ost/gui/widget_registry.hh -include/ost/gui/widget_state_saver.hh -include/ost/img/alg/alg_mirror.hh -include/ost/img/alg/alg_shift.hh -include/ost/img/alg/alg_transform.hh -include/ost/img/alg/anisotropic.hh -include/ost/img/alg/auto_correlate.hh -include/ost/img/alg/clear.hh -include/ost/img/alg/clip_min_max.hh -include/ost/img/alg/conjugate.hh -include/ost/img/alg/convolute.hh -include/ost/img/alg/correlate.hh -include/ost/img/alg/cross_correlate.hh -include/ost/img/alg/density_slice.hh -include/ost/img/alg/dft.hh -include/ost/img/alg/discrete_shrink.hh -include/ost/img/alg/fft.hh -include/ost/img/alg/fftw_helper.hh -include/ost/img/alg/fill.hh -include/ost/img/alg/filter.hh -include/ost/img/alg/fourier_filters.hh -include/ost/img/alg/fractional_shift.hh -include/ost/img/alg/gaussian.hh -include/ost/img/alg/gaussian_gradient_magnitude.hh -include/ost/img/alg/gaussian_laplacian.hh -include/ost/img/alg/highest_peak_search_3d.hh -include/ost/img/alg/histogram.hh -include/ost/img/alg/line_average.hh -include/ost/img/alg/line_iterator.hh -include/ost/img/alg/local_sigma_threshold.hh -include/ost/img/alg/mask_image.hh -include/ost/img/alg/module_config.hh -include/ost/img/alg/negate.hh -include/ost/img/alg/norm.hh -include/ost/img/alg/norm_linear.hh -include/ost/img/alg/norm_log.hh -include/ost/img/alg/norm_od.hh -include/ost/img/alg/normalizer.hh -include/ost/img/alg/normalizer_factory.hh -include/ost/img/alg/polar.hh -include/ost/img/alg/power_spectrum.hh -include/ost/img/alg/randomize.hh -include/ost/img/alg/rscrosscorr.hh -include/ost/img/alg/smooth_mask_image.hh -include/ost/img/alg/stat.hh -include/ost/img/alg/stat_accumulator.hh -include/ost/img/alg/stat_min_max.hh -include/ost/img/alg/threshold.hh -include/ost/img/alg/transcendentals.hh -include/ost/img/alg/transform.hh -include/ost/img/alg/transform_fw.hh -include/ost/img/alg/transformation_base.hh -include/ost/img/alg/transformations.hh -include/ost/img/algorithm.hh -include/ost/img/circle_mask.hh -include/ost/img/composite_mask.hh -include/ost/img/data.hh -include/ost/img/data_algorithm.hh -include/ost/img/data_observer.hh -include/ost/img/data_types.hh -include/ost/img/debug.hh -include/ost/img/dllexport.hh -include/ost/img/extent.hh -include/ost/img/extent_iterator.hh -include/ost/img/extent_mask.hh -include/ost/img/image.hh -include/ost/img/image_factory.hh -include/ost/img/image_fw.hh -include/ost/img/image_handle.hh -include/ost/img/image_handle_fw.hh -include/ost/img/image_impl.hh -include/ost/img/image_list.hh -include/ost/img/image_state.hh -include/ost/img/image_state/binop.hh -include/ost/img/image_state/dispatch.hh -include/ost/img/image_state/image_state.hh -include/ost/img/image_state/image_state_algorithm.hh -include/ost/img/image_state/image_state_base.hh -include/ost/img/image_state/image_state_base_fw.hh -include/ost/img/image_state/image_state_def.hh -include/ost/img/image_state/image_state_factory.hh -include/ost/img/image_state/image_state_frequency_domain.hh -include/ost/img/image_state/image_state_fw.hh -include/ost/img/image_state/image_state_half_frequency_domain.hh -include/ost/img/image_state/image_state_impl.hh -include/ost/img/image_state/image_state_spatial_domain.hh -include/ost/img/image_state/image_state_visitor.hh -include/ost/img/image_state/image_state_visitor_fw.hh -include/ost/img/image_state/index.hh -include/ost/img/image_state/type_fw.hh -include/ost/img/image_state/value_holder.hh -include/ost/img/image_state_fw.hh -include/ost/img/inverted_mask.hh -include/ost/img/map.hh -include/ost/img/mask.hh -include/ost/img/mask_base.hh -include/ost/img/mask_base_fw.hh -include/ost/img/mask_info_convert.hh -include/ost/img/mask_op.hh -include/ost/img/mask_visitor.hh -include/ost/img/module_config.hh -include/ost/img/normalizer_fw.hh -include/ost/img/normalizer_impl.hh -include/ost/img/null_data.hh -include/ost/img/observable.hh -include/ost/img/paste_impl.hh -include/ost/img/peak.hh -include/ost/img/phase.hh -include/ost/img/physical_units.hh -include/ost/img/pixel_sampling.hh -include/ost/img/point.hh -include/ost/img/point_list.hh -include/ost/img/polygon_mask.hh -include/ost/img/progress.hh -include/ost/img/raster_image/raster_image.hh -include/ost/img/size.hh -include/ost/img/spherical_mask.hh -include/ost/img/util.cc -include/ost/img/util.hh -include/ost/img/value_util.hh -include/ost/img/vecmat.hh -include/ost/info/geom_info_conversion.hh -include/ost/info/info.hh -include/ost/info/info_error.hh -include/ost/info/info_fw.hh -include/ost/info/info_group.hh -include/ost/info/info_handle.hh -include/ost/info/info_impl.hh -include/ost/info/info_impl_fw.hh -include/ost/info/info_item.hh -include/ost/info/info_path.hh -include/ost/info/info_set.hh -include/ost/info/info_verbose_visitor.hh -include/ost/info/info_visitor.hh -include/ost/info/item_type.hh -include/ost/info/item_type_cast.hh -include/ost/info/module_config.hh -include/ost/integrity_error.hh -include/ost/invalid_handle.hh -include/ost/io/binary_data_sink.hh -include/ost/io/binary_data_source.hh -include/ost/io/chemdict_parser.hh -include/ost/io/clustal_io_handler.hh -include/ost/io/container_serialization.hh -include/ost/io/convert.hh -include/ost/io/convert_vax_data.h -include/ost/io/converting_streams.hh -include/ost/io/dcd_io.hh -include/ost/io/entity_io_crd_handler.hh -include/ost/io/entity_io_handler.hh -include/ost/io/entity_io_mae_handler.hh -include/ost/io/entity_io_mmcif_handler.hh -include/ost/io/entity_io_pdb_handler.hh -include/ost/io/entity_io_pqr_handler.hh -include/ost/io/entity_io_sdf_handler.hh -include/ost/io/fasta_io_handler.hh -include/ost/io/formatted_line.hh -include/ost/io/hhm_io_handler.hh -include/ost/io/image_format.hh -include/ost/io/image_format_conversion.cc -include/ost/io/img/convert_vax_data.h -include/ost/io/img/image_format.hh -include/ost/io/img/image_format_conversion.cc -include/ost/io/img/jpk_util.hh -include/ost/io/img/load_map.hh -include/ost/io/img/map_io_dat_handler.hh -include/ost/io/img/map_io_df3_handler.hh -include/ost/io/img/map_io_dm3_handler.hh -include/ost/io/img/map_io_dx_handler.hh -include/ost/io/img/map_io_handler.hh -include/ost/io/img/map_io_ipl_handler.hh -include/ost/io/img/map_io_jpk_handler.hh -include/ost/io/img/map_io_mrc_handler.hh -include/ost/io/img/map_io_nanoscope_handler.hh -include/ost/io/img/map_io_png_handler.hh -include/ost/io/img/map_io_situs_handler.hh -include/ost/io/img/map_io_spi_handler.hh -include/ost/io/img/map_io_tiff_handler.hh -include/ost/io/img/tiff_util.hh -include/ost/io/io_exception.hh -include/ost/io/io_manager.hh -include/ost/io/io_profile.hh -include/ost/io/io_utils.hh -include/ost/io/jpk_util.hh -include/ost/io/load.hh -include/ost/io/load_entity.hh -include/ost/io/load_map.hh -include/ost/io/load_surface.hh -include/ost/io/map_io_dat_handler.hh -include/ost/io/map_io_df3_handler.hh -include/ost/io/map_io_dm3_handler.hh -include/ost/io/map_io_dx_handler.hh -include/ost/io/map_io_handler.hh -include/ost/io/map_io_ipl_handler.hh -include/ost/io/map_io_jpk_handler.hh -include/ost/io/map_io_mrc_handler.hh -include/ost/io/map_io_nanoscope_handler.hh -include/ost/io/map_io_png_handler.hh -include/ost/io/map_io_situs_handler.hh -include/ost/io/map_io_spi_handler.hh -include/ost/io/map_io_tiff_handler.hh -include/ost/io/mmcif_info.hh -include/ost/io/mmcif_reader.hh -include/ost/io/module_config.hh -include/ost/io/mol/chemdict_parser.hh -include/ost/io/mol/dcd_io.hh -include/ost/io/mol/entity_io_crd_handler.hh -include/ost/io/mol/entity_io_handler.hh -include/ost/io/mol/entity_io_mae_handler.hh -include/ost/io/mol/entity_io_mmcif_handler.hh -include/ost/io/mol/entity_io_pdb_handler.hh -include/ost/io/mol/entity_io_pqr_handler.hh -include/ost/io/mol/entity_io_sdf_handler.hh -include/ost/io/mol/io_profile.hh -include/ost/io/mol/load_entity.hh -include/ost/io/mol/load_surface.hh -include/ost/io/mol/mmcif_info.hh -include/ost/io/mol/mmcif_reader.hh -include/ost/io/mol/pdb_reader.hh -include/ost/io/mol/pdb_str.hh -include/ost/io/mol/pdb_writer.hh -include/ost/io/mol/save_entity.hh -include/ost/io/mol/sdf_reader.hh -include/ost/io/mol/sdf_writer.hh -include/ost/io/mol/star_parser.hh -include/ost/io/mol/surface_io_handler.hh -include/ost/io/mol/surface_io_msms_handler.hh -include/ost/io/pdb_reader.hh -include/ost/io/pdb_str.hh -include/ost/io/pdb_writer.hh -include/ost/io/pir_io_handler.hh -include/ost/io/profile_io_handler.hh -include/ost/io/promod_io_handler.hh -include/ost/io/pssm_io_handler.hh -include/ost/io/save.hh -include/ost/io/save_entity.hh -include/ost/io/sdf_reader.hh -include/ost/io/sdf_writer.hh -include/ost/io/seq/clustal_io_handler.hh -include/ost/io/seq/fasta_io_handler.hh -include/ost/io/seq/hhm_io_handler.hh -include/ost/io/seq/load.hh -include/ost/io/seq/pir_io_handler.hh -include/ost/io/seq/profile_io_handler.hh -include/ost/io/seq/promod_io_handler.hh -include/ost/io/seq/pssm_io_handler.hh -include/ost/io/seq/save.hh -include/ost/io/seq/sequence_io_handler.hh -include/ost/io/sequence_io_handler.hh -include/ost/io/star_parser.hh -include/ost/io/surface_io_handler.hh -include/ost/io/surface_io_msms_handler.hh -include/ost/io/swap_util.hh -include/ost/io/tiff_util.hh -include/ost/log.hh -include/ost/log_sink.hh -include/ost/message.hh -include/ost/module_config.hh -include/ost/mol/alg/accessibility.hh -include/ost/mol/alg/adjacency_bitmap.hh -include/ost/mol/alg/clash_score.hh -include/ost/mol/alg/consistency_checks.hh -include/ost/mol/alg/construct_cbeta.hh -include/ost/mol/alg/contact_overlap.hh -include/ost/mol/alg/distance_rmsd_test.hh -include/ost/mol/alg/distance_test_common.hh -include/ost/mol/alg/domain_find.hh -include/ost/mol/alg/entity_to_density.hh -include/ost/mol/alg/filter_clashes.hh -include/ost/mol/alg/local_dist_diff_test.hh -include/ost/mol/alg/module_config.hh -include/ost/mol/alg/pdbize.hh -include/ost/mol/alg/sec_struct.hh -include/ost/mol/alg/sec_structure_segments.hh -include/ost/mol/alg/similarity_matrix.hh -include/ost/mol/alg/structure_analysis.hh -include/ost/mol/alg/superpose_frames.hh -include/ost/mol/alg/svd_superpose.hh -include/ost/mol/alg/trajectory_analysis.hh -include/ost/mol/atom_base.hh -include/ost/mol/atom_handle.hh -include/ost/mol/atom_view.hh -include/ost/mol/bond_handle.hh -include/ost/mol/bond_table.hh -include/ost/mol/bounding_box.hh -include/ost/mol/builder.hh -include/ost/mol/chain_base.hh -include/ost/mol/chain_handle.hh -include/ost/mol/chain_type.hh -include/ost/mol/chain_view.hh -include/ost/mol/chem_class.hh -include/ost/mol/chem_type.hh -include/ost/mol/coord_frame.hh -include/ost/mol/coord_group.hh -include/ost/mol/coord_source.hh -include/ost/mol/editor_base.hh -include/ost/mol/editor_type_fw.hh -include/ost/mol/entity_base.hh -include/ost/mol/entity_handle.hh -include/ost/mol/entity_observer.hh -include/ost/mol/entity_observer_fw.hh -include/ost/mol/entity_property_mapper.hh -include/ost/mol/entity_view.hh -include/ost/mol/entity_visitor.hh -include/ost/mol/entity_visitor_fw.hh -include/ost/mol/handle_type_fw.hh -include/ost/mol/ics_editor.hh -include/ost/mol/impl/atom_group.hh -include/ost/mol/impl/atom_impl.hh -include/ost/mol/impl/atom_impl_fw.hh -include/ost/mol/impl/atom_prop.hh -include/ost/mol/impl/chain_impl.hh -include/ost/mol/impl/chain_impl_fw.hh -include/ost/mol/impl/connector_impl.hh -include/ost/mol/impl/connector_impl_fw.hh -include/ost/mol/impl/dihedral.hh -include/ost/mol/impl/entity_impl.hh -include/ost/mol/impl/entity_impl_fw.hh -include/ost/mol/impl/fragment_impl.hh -include/ost/mol/impl/fragment_impl_fw.hh -include/ost/mol/impl/pointer_iterator.hh -include/ost/mol/impl/query_ast.hh -include/ost/mol/impl/query_ast_fw.hh -include/ost/mol/impl/query_impl.hh -include/ost/mol/impl/query_impl_fw.hh -include/ost/mol/impl/residue_impl.hh -include/ost/mol/impl/residue_impl_fw.hh -include/ost/mol/impl/surface_impl.hh -include/ost/mol/impl/surface_impl_fw.hh -include/ost/mol/impl/torsion_impl.hh -include/ost/mol/impl/torsion_impl_fw.hh -include/ost/mol/in_mem_coord_source.hh -include/ost/mol/module_config.hh -include/ost/mol/mol.hh -include/ost/mol/not_connected_error.hh -include/ost/mol/property_id.hh -include/ost/mol/query.hh -include/ost/mol/query_error.hh -include/ost/mol/query_state.hh -include/ost/mol/query_view_wrapper.hh -include/ost/mol/residue_base.hh -include/ost/mol/residue_handle.hh -include/ost/mol/residue_prop.hh -include/ost/mol/residue_view.hh -include/ost/mol/sec_structure.hh -include/ost/mol/spatial_organizer.hh -include/ost/mol/surface.hh -include/ost/mol/surface_builder.hh -include/ost/mol/surface_handle.hh -include/ost/mol/surface_prop.hh -include/ost/mol/torsion_handle.hh -include/ost/mol/transfer_connectivity.hh -include/ost/mol/transform.hh -include/ost/mol/view_op.hh -include/ost/mol/view_type_fw.hh -include/ost/mol/xcs_editor.hh -include/ost/platform.hh -include/ost/pod_vector.hh -include/ost/profile.hh -include/ost/ptr_observer.hh -include/ost/range.hh -include/ost/seq/alg/alignment_opts.hh -include/ost/seq/alg/clip_alignment.hh -include/ost/seq/alg/conservation.hh -include/ost/seq/alg/contact_prediction_score.hh -include/ost/seq/alg/contact_weight_matrix.hh -include/ost/seq/alg/default_contact_weight_matrix.hh -include/ost/seq/alg/default_pair_subst_weight_matrix.hh -include/ost/seq/alg/distance_map.hh -include/ost/seq/alg/entropy.hh -include/ost/seq/alg/global_align.hh -include/ost/seq/alg/ins_del.hh -include/ost/seq/alg/local_align.hh -include/ost/seq/alg/merge_pairwise_alignments.hh -include/ost/seq/alg/module_config.hh -include/ost/seq/alg/pair_subst_weight_matrix.hh -include/ost/seq/alg/semiglobal_align.hh -include/ost/seq/alg/sequence_identity.hh -include/ost/seq/alg/sequence_similarity.hh -include/ost/seq/alg/subst_weight_matrix.hh -include/ost/seq/alg/variance_map.hh -include/ost/seq/aligned_column.hh -include/ost/seq/aligned_column_iterator.hh -include/ost/seq/aligned_region.hh -include/ost/seq/alignment_handle.hh -include/ost/seq/impl/sequence_impl.hh -include/ost/seq/impl/sequence_impl_fw.hh -include/ost/seq/impl/sequence_list_impl.hh -include/ost/seq/impl/sequence_list_impl_fw.hh -include/ost/seq/impl/sequence_list_iterator.hh -include/ost/seq/invalid_sequence.hh -include/ost/seq/module_config.hh -include/ost/seq/profile_handle.hh -include/ost/seq/sequence_handle.hh -include/ost/seq/sequence_list.hh -include/ost/seq/sequence_op.hh -include/ost/seq/views_from_sequences.hh -include/ost/stdint.hh -include/ost/stdint_msc.hh -include/ost/string_ref.hh -include/ost/test_utils/compare_files.hh -include/ost/tri_matrix.hh -include/ost/units.hh -include/ost/version.hh -lib/libost_base.so -lib/libost_base.so.1.7 -lib/libost_base.so.1.7.1 -lib/libost_conop.so -lib/libost_conop.so.1.7 -lib/libost_conop.so.1.7.1 -lib/libost_db.so -lib/libost_db.so.1.7 -lib/libost_db.so.1.7.1 -lib/libost_geom.so -lib/libost_geom.so.1.7 -lib/libost_geom.so.1.7.1 -lib/libost_gfx.so -lib/libost_gfx.so.1.7 -lib/libost_gfx.so.1.7.1 -lib/libost_gui.so -lib/libost_gui.so.1.7 -lib/libost_gui.so.1.7.1 -lib/libost_img.so -lib/libost_img.so.1.7 -lib/libost_img.so.1.7.1 -lib/libost_img_alg.so -lib/libost_img_alg.so.1.7 -lib/libost_img_alg.so.1.7.1 -lib/libost_info.so -lib/libost_info.so.1.7 -lib/libost_info.so.1.7.1 -lib/libost_io.so -lib/libost_io.so.1.7 -lib/libost_io.so.1.7.1 -lib/libost_mol.so -lib/libost_mol.so.1.7 -lib/libost_mol.so.1.7.1 -lib/libost_mol_alg.so -lib/libost_mol_alg.so.1.7 -lib/libost_mol_alg.so.1.7.1 -lib/libost_seq.so -lib/libost_seq.so.1.7 -lib/libost_seq.so.1.7.1 -lib/libost_seq_alg.so -lib/libost_seq_alg.so.1.7 -lib/libost_seq_alg.so.1.7.1 -%%PYTHON_SITELIBDIR%%/ost/__init__.py -%%PYTHON_SITELIBDIR%%/ost/_ost_base.so -%%PYTHON_SITELIBDIR%%/ost/bindings/__init__.py -%%PYTHON_SITELIBDIR%%/ost/bindings/__init__.pyc -%%PYTHON_SITELIBDIR%%/ost/bindings/align_3dcomb.py -%%PYTHON_SITELIBDIR%%/ost/bindings/align_3dcomb.pyc -%%PYTHON_SITELIBDIR%%/ost/bindings/blast.py -%%PYTHON_SITELIBDIR%%/ost/bindings/blast.pyc -%%PYTHON_SITELIBDIR%%/ost/bindings/cadscore.py -%%PYTHON_SITELIBDIR%%/ost/bindings/cadscore.pyc -%%PYTHON_SITELIBDIR%%/ost/bindings/clustalw.py -%%PYTHON_SITELIBDIR%%/ost/bindings/clustalw.pyc -%%PYTHON_SITELIBDIR%%/ost/bindings/dssp.py -%%PYTHON_SITELIBDIR%%/ost/bindings/dssp.pyc -%%PYTHON_SITELIBDIR%%/ost/bindings/hbplus.py -%%PYTHON_SITELIBDIR%%/ost/bindings/hbplus.pyc -%%PYTHON_SITELIBDIR%%/ost/bindings/hhblits.py -%%PYTHON_SITELIBDIR%%/ost/bindings/hhblits.pyc -%%PYTHON_SITELIBDIR%%/ost/bindings/ialign.py -%%PYTHON_SITELIBDIR%%/ost/bindings/ialign.pyc -%%PYTHON_SITELIBDIR%%/ost/bindings/kclust.py -%%PYTHON_SITELIBDIR%%/ost/bindings/kclust.pyc -%%PYTHON_SITELIBDIR%%/ost/bindings/lga.py -%%PYTHON_SITELIBDIR%%/ost/bindings/lga.pyc -%%PYTHON_SITELIBDIR%%/ost/bindings/msms.py -%%PYTHON_SITELIBDIR%%/ost/bindings/msms.pyc -%%PYTHON_SITELIBDIR%%/ost/bindings/naccess.py -%%PYTHON_SITELIBDIR%%/ost/bindings/naccess.pyc -%%PYTHON_SITELIBDIR%%/ost/bindings/tmtools.py -%%PYTHON_SITELIBDIR%%/ost/bindings/tmtools.pyc -%%PYTHON_SITELIBDIR%%/ost/bindings/utils.py -%%PYTHON_SITELIBDIR%%/ost/bindings/utils.pyc -%%PYTHON_SITELIBDIR%%/ost/conop/__init__.py -%%PYTHON_SITELIBDIR%%/ost/conop/__init__.pyc -%%PYTHON_SITELIBDIR%%/ost/conop/_ost_conop.so -%%PYTHON_SITELIBDIR%%/ost/conop/cleanup.py -%%PYTHON_SITELIBDIR%%/ost/conop/cleanup.pyc -%%PYTHON_SITELIBDIR%%/ost/db/__init__.py -%%PYTHON_SITELIBDIR%%/ost/db/__init__.pyc -%%PYTHON_SITELIBDIR%%/ost/dng_startup.py -%%PYTHON_SITELIBDIR%%/ost/geom/__init__.py -%%PYTHON_SITELIBDIR%%/ost/geom/__init__.pyc -%%PYTHON_SITELIBDIR%%/ost/geom/_ost_geom.so -%%PYTHON_SITELIBDIR%%/ost/gfx/__init__.py -%%PYTHON_SITELIBDIR%%/ost/gfx/__init__.pyc -%%PYTHON_SITELIBDIR%%/ost/gfx/_ost_gfx.so -%%PYTHON_SITELIBDIR%%/ost/gfx/py_gfx_obj.py -%%PYTHON_SITELIBDIR%%/ost/gfx/py_gfx_obj.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/__init__.py -%%PYTHON_SITELIBDIR%%/ost/gui/__init__.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/_ost_gui.so -%%PYTHON_SITELIBDIR%%/ost/gui/dng/__init__.py -%%PYTHON_SITELIBDIR%%/ost/gui/dng/__init__.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/dng/init.py -%%PYTHON_SITELIBDIR%%/ost/gui/dng/init.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/dng/menu.py -%%PYTHON_SITELIBDIR%%/ost/gui/dng/menu.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/dng/superpositiondialog.py -%%PYTHON_SITELIBDIR%%/ost/gui/dng/superpositiondialog.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/dng/termuse.py -%%PYTHON_SITELIBDIR%%/ost/gui/dng/termuse.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/gosty_startup.py -%%PYTHON_SITELIBDIR%%/ost/gui/gosty_startup.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/helpwidget.py -%%PYTHON_SITELIBDIR%%/ost/gui/helpwidget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/init_context_menu.py -%%PYTHON_SITELIBDIR%%/ost/gui/init_context_menu.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/init_menubar.py -%%PYTHON_SITELIBDIR%%/ost/gui/init_menubar.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/init_spacenav.py -%%PYTHON_SITELIBDIR%%/ost/gui/init_spacenav.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/init_splash.py -%%PYTHON_SITELIBDIR%%/ost/gui/init_splash.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/__init__.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/__init__.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/color_options_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/color_options_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/color_select_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/color_select_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/combo_options_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/combo_options_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/cpk_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/cpk_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/custom_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/custom_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/gradient_editor_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/gradient_editor_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/gradient_info_handler.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/gradient_info_handler.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/gradient_list_model.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/gradient_list_model.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/gradient_preset_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/gradient_preset_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/hsc_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/hsc_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/immutable_gradient_info_handler.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/immutable_gradient_info_handler.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/immutable_preset_info_handler.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/immutable_preset_info_handler.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/init_inspector.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/init_inspector.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/inspector_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/inspector_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/line_trace_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/line_trace_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/map_level_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/map_level_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/preset.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/preset.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/preset_editor_list_model.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/preset_editor_list_model.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/preset_editor_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/preset_editor_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/preset_info_handler.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/preset_info_handler.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/preset_list_model.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/preset_list_model.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/preset_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/preset_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/query_editor.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/query_editor.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/remote.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/remote.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/render_mode_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/render_mode_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/render_op.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/render_op.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/render_options_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/render_options_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/scene_observer_impl.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/scene_observer_impl.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/scene_selection_helper.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/scene_selection_helper.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/simple_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/simple_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/sline_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/sline_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/toolbar_options_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/toolbar_options_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/trace_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/trace_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/tube_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/tube_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/uniform_color_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/uniform_color_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/visibility_op.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/visibility_op.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/scene/wireframe_widget.py -%%PYTHON_SITELIBDIR%%/ost/gui/scene/wireframe_widget.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/table.py -%%PYTHON_SITELIBDIR%%/ost/gui/table.pyc -%%PYTHON_SITELIBDIR%%/ost/gui/trajectory_viewer.py -%%PYTHON_SITELIBDIR%%/ost/gui/trajectory_viewer.pyc -%%PYTHON_SITELIBDIR%%/ost/img/__init__.py -%%PYTHON_SITELIBDIR%%/ost/img/__init__.pyc -%%PYTHON_SITELIBDIR%%/ost/img/_ost_img.so -%%PYTHON_SITELIBDIR%%/ost/img/alg/__init__.py -%%PYTHON_SITELIBDIR%%/ost/img/alg/__init__.pyc -%%PYTHON_SITELIBDIR%%/ost/img/alg/_ost_img_alg.so -%%PYTHON_SITELIBDIR%%/ost/info/__init__.py -%%PYTHON_SITELIBDIR%%/ost/info/__init__.pyc -%%PYTHON_SITELIBDIR%%/ost/info/_ost_info.so -%%PYTHON_SITELIBDIR%%/ost/io/__init__.py -%%PYTHON_SITELIBDIR%%/ost/io/__init__.pyc -%%PYTHON_SITELIBDIR%%/ost/io/_ost_io.so -%%PYTHON_SITELIBDIR%%/ost/io/remote.py -%%PYTHON_SITELIBDIR%%/ost/io/remote.pyc -%%PYTHON_SITELIBDIR%%/ost/io/repository.py -%%PYTHON_SITELIBDIR%%/ost/io/repository.pyc -%%PYTHON_SITELIBDIR%%/ost/mol/__init__.py -%%PYTHON_SITELIBDIR%%/ost/mol/__init__.pyc -%%PYTHON_SITELIBDIR%%/ost/mol/_ost_mol.so -%%PYTHON_SITELIBDIR%%/ost/mol/alg/__init__.py -%%PYTHON_SITELIBDIR%%/ost/mol/alg/__init__.pyc -%%PYTHON_SITELIBDIR%%/ost/mol/alg/_ost_mol_alg.so -%%PYTHON_SITELIBDIR%%/ost/mol/alg/hbond.py -%%PYTHON_SITELIBDIR%%/ost/mol/alg/hbond.pyc -%%PYTHON_SITELIBDIR%%/ost/mol/alg/helix_kinks.py -%%PYTHON_SITELIBDIR%%/ost/mol/alg/helix_kinks.pyc -%%PYTHON_SITELIBDIR%%/ost/mol/alg/qsscoring.py -%%PYTHON_SITELIBDIR%%/ost/mol/alg/qsscoring.pyc -%%PYTHON_SITELIBDIR%%/ost/mol/alg/structure_analysis.py -%%PYTHON_SITELIBDIR%%/ost/mol/alg/structure_analysis.pyc -%%PYTHON_SITELIBDIR%%/ost/mol/alg/superpose.py -%%PYTHON_SITELIBDIR%%/ost/mol/alg/superpose.pyc -%%PYTHON_SITELIBDIR%%/ost/mol/alg/trajectory_analysis.py -%%PYTHON_SITELIBDIR%%/ost/mol/alg/trajectory_analysis.pyc -%%PYTHON_SITELIBDIR%%/ost/mol/alg/views.py -%%PYTHON_SITELIBDIR%%/ost/mol/alg/views.pyc -%%PYTHON_SITELIBDIR%%/ost/ost_startup.py -%%PYTHON_SITELIBDIR%%/ost/seq/__init__.py -%%PYTHON_SITELIBDIR%%/ost/seq/__init__.pyc -%%PYTHON_SITELIBDIR%%/ost/seq/_ost_seq.so -%%PYTHON_SITELIBDIR%%/ost/seq/alg/__init__.py -%%PYTHON_SITELIBDIR%%/ost/seq/alg/__init__.pyc -%%PYTHON_SITELIBDIR%%/ost/seq/alg/_ost_seq_alg.so -%%PYTHON_SITELIBDIR%%/ost/seq/alg/mat.py -%%PYTHON_SITELIBDIR%%/ost/seq/alg/mat.pyc -%%PYTHON_SITELIBDIR%%/ost/seq/alg/renumber.py -%%PYTHON_SITELIBDIR%%/ost/seq/alg/renumber.pyc -%%PYTHON_SITELIBDIR%%/ost/settings.py -%%PYTHON_SITELIBDIR%%/ost/settings.pyc -%%PYTHON_SITELIBDIR%%/ost/stutil.py -%%PYTHON_SITELIBDIR%%/ost/stutil.pyc -%%PYTHON_SITELIBDIR%%/ost/table.py -%%PYTHON_SITELIBDIR%%/ost/table.pyc -%%PYTHON_SITELIBDIR%%/ost/table_selector.py -%%PYTHON_SITELIBDIR%%/ost/table_selector.pyc -%%PYTHON_SITELIBDIR%%/ost/testutils.py -%%PYTHON_SITELIBDIR%%/ost/testutils.pyc -%%PYTHON_SITELIBDIR%%/ost/xmlrunner.py -%%PYTHON_SITELIBDIR%%/ost/xmlrunner.pyc -libexec/openstructure/gosty -libexec/openstructure/ost_config -%%DATADIR%%/atom_scattering_properties.txt -%%DATADIR%%/gui/icons/add_icon.png -%%DATADIR%%/gui/icons/close_icon.png -%%DATADIR%%/gui/icons/critical_icon.png -%%DATADIR%%/gui/icons/delete_icon.png -%%DATADIR%%/gui/icons/distance_icon.png -%%DATADIR%%/gui/icons/find_icon.png -%%DATADIR%%/gui/icons/information_icon.png -%%DATADIR%%/gui/icons/map_icon.png -%%DATADIR%%/gui/icons/menubar_icon.png -%%DATADIR%%/gui/icons/refresh.png -%%DATADIR%%/gui/icons/rigid_body_manipulator_icon.png -%%DATADIR%%/gui/icons/selection_icon.png -%%DATADIR%%/gui/icons/show_sidebar_icon.png -%%DATADIR%%/gui/icons/site_icon.png -%%DATADIR%%/gui/icons/split_icon.png -%%DATADIR%%/gui/icons/warning_icon.png -%%DATADIR%%/gui/images/logo-small.png -%%DATADIR%%/scene/gradients.xml -%%DATADIR%%/scene/icons/color_icon.png -%%DATADIR%%/scene/icons/preset_icon.png -%%DATADIR%%/scene/icons/render_icon.png -%%DATADIR%%/scene/icons/tool_icon.png -%%DATADIR%%/scene/presets.xml -%%DATADIR%%/stereo_chemical_props.txt -%%DATADIR%%/textures/glyph_texture.png -%%DATADIR%%/textures/test_texture.png |