- Update Unipro UGENE and documentation to version 1.14.0

- Remove patches integrated upstream (it's nice to have direct contact)
- Sort USES and pkg-plist, cleanup Makefile a bit while here

Approved by:	maintainer (implicit)

1 files changed, 0 insertions, 20 deletions

diff --git a/biology/ugene/files/patch-src-ugeneui-src-Main.cpp b/biology/ugene/files/patch-src-ugeneui-src-Main.cpp
deleted file mode 100644
index cf7d556bfcf7..000000000000
--- a/biology/ugene/files/patch-src-ugeneui-src-Main.cpp
+++ /dev/null
@@ -1,20 +0,0 @@
---- src/ugeneui/src/Main.cpp.orig
-+++ src/ugeneui/src/Main.cpp
-@@ -164,7 +164,7 @@ static void setDataSearchPaths() {
-         dataSearchPaths.push_back( appDirPath+RELATIVE_DEV_DATA_DIR );
-     }
- 
--#if (defined(Q_OS_LINUX) || defined(Q_OS_UNIX)) && defined( UGENE_DATA_DIR )
-+#if defined(Q_OS_UNIX) && defined(UGENE_DATA_DIR)
-     //using directory which is set during installation process on Linux
-     QString ugene_data_dir( UGENE_DATA_DIR );
-     if( QDir(ugene_data_dir).exists() ) {
-@@ -361,7 +361,7 @@ int main(int argc, char **argv) 
-     qt_use_native_dialogs = useNative; //using local here for debugger
- #endif
- 
--#if defined(Q_OS_MAC) || defined(Q_OS_LINUX)
-+#if defined(Q_OS_UNIX)
-     if (envList.indexOf("UGENE_GUI_TEST=1") >= 0) {
-         QApplication::setAttribute(Qt::AA_DontUseNativeMenuBar);
-     }