diff options
| author | Jason W. Bacon <jwb@FreeBSD.org> | 2022-03-15 16:36:49 -0500 |
|---|---|---|
| committer | Jason W. Bacon <jwb@FreeBSD.org> | 2022-03-15 16:36:49 -0500 |
| commit | b8604e856abfd2bce2cd31e86dc4693be4d38763 (patch) | |
| tree | b6f4762b4003960eaa4816ae7bb2a73482f50599 | |
| parent | biology/biolibc: Update to 0.2.2 (diff) | |
biology/biolibc-tools: Update to 0.1.2
New fastx-stats and ensembl2gene subcommands
Minor updates for biolibc 0.2.2 API changes
Minor bug fixes and ennancements
| -rw-r--r-- | biology/biolibc-tools/Makefile | 3 | ||||
| -rw-r--r-- | biology/biolibc-tools/distinfo | 6 | ||||
| -rw-r--r-- | biology/biolibc-tools/pkg-plist | 4 |
3 files changed, 9 insertions, 4 deletions
diff --git a/biology/biolibc-tools/Makefile b/biology/biolibc-tools/Makefile index 4a63e3749e93..7cf0341514eb 100644 --- a/biology/biolibc-tools/Makefile +++ b/biology/biolibc-tools/Makefile @@ -1,7 +1,7 @@ # Created by: J. Bacon <jwb@FreeBSD.org> PORTNAME= biolibc-tools -DISTVERSION= 0.1.1 +DISTVERSION= 0.1.2 CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org @@ -12,6 +12,7 @@ LICENSE_FILE= ${WRKSRC}/LICENSE BUILD_DEPENDS= uthash>0:devel/uthash LIB_DEPENDS= libbiolibc.so:biology/biolibc \ + libxtend.so:devel/libxtend \ libxxhash.so:devel/xxhash USE_GITHUB= yes diff --git a/biology/biolibc-tools/distinfo b/biology/biolibc-tools/distinfo index d3732ec6c333..e513f059cd26 100644 --- a/biology/biolibc-tools/distinfo +++ b/biology/biolibc-tools/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1639495090 -SHA256 (auerlab-biolibc-tools-0.1.1_GH0.tar.gz) = 169ea4bbd70049d9e364e145db0ca4793da99202f12262e00485407cfbd2997b -SIZE (auerlab-biolibc-tools-0.1.1_GH0.tar.gz) = 21700 +TIMESTAMP = 1647347831 +SHA256 (auerlab-biolibc-tools-0.1.2_GH0.tar.gz) = 817b3f88b1d83a28389dbbb43ef1e0d2c1fb3b7e72ca7151fa26a35058ef4558 +SIZE (auerlab-biolibc-tools-0.1.2_GH0.tar.gz) = 24610 diff --git a/biology/biolibc-tools/pkg-plist b/biology/biolibc-tools/pkg-plist index f5fe188a60a8..b82ed3ef61dc 100644 --- a/biology/biolibc-tools/pkg-plist +++ b/biology/biolibc-tools/pkg-plist @@ -1,19 +1,23 @@ bin/blt libexec/biolibc-tools/chrom-lens +libexec/biolibc-tools/ensemblid2gene libexec/biolibc-tools/extract-seq libexec/biolibc-tools/fasta2seq libexec/biolibc-tools/fastq-derep.sh libexec/biolibc-tools/fastx-derep +libexec/biolibc-tools/fastx-stats libexec/biolibc-tools/fastx2tsv libexec/biolibc-tools/find-orfs libexec/biolibc-tools/gff2bed libexec/biolibc-tools/uniq-seqs.awk libexec/biolibc-tools/vcf-search man/man1/blt-chrom-lens.1.gz +man/man1/blt-ensemblid2gene.1.gz man/man1/blt-extract-seq.1.gz man/man1/blt-fasta2seq.1.gz man/man1/blt-fastq-derep.sh.1.gz man/man1/blt-fastx-derep.1.gz +man/man1/blt-fastx-stats.1.gz man/man1/blt-fastx2tsv.1.gz man/man1/blt-find-orfs.1.gz man/man1/blt-gff2bed.1.gz |