bin/cmalign
bin/cmbuild
bin/cmcalibrate
bin/cmconvert
bin/cmemit
bin/cmfetch
bin/cmpress
bin/cmscan
bin/cmsearch
bin/cmstat
man/man1/cmalign.1.gz
man/man1/cmbuild.1.gz
man/man1/cmcalibrate.1.gz
man/man1/cmconvert.1.gz
man/man1/cmemit.1.gz
man/man1/cmfetch.1.gz
man/man1/cmpress.1.gz
man/man1/cmscan.1.gz
man/man1/cmsearch.1.gz
man/man1/cmstat.1.gz
man/man1/infernal.1.gz
%%PORTDOCS%%%%DOCSDIR%%/Userguide.pdf
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/5S_rRNA.c.cm
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/5S_rRNA.sto
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/Cobalamin.c.cm
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/Cobalamin.fa
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/Cobalamin.sto
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/metag-example.fa
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/minifam-metag.out
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/minifam.cm
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/minifam.cm.i1f
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/minifam.cm.i1i
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/minifam.cm.i1m
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/minifam.cm.i1p
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/mrum-genome.fa
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/mrum-tRNAs10.fa
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/mrum-tRNAs10.out
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/tRNA5-hand.c.cm
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/tRNA5-hand.sto
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/tRNA5-mrum.out
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/tRNA5-noss.sto
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/tRNA5.c.cm
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/tRNA5.sto