summaryrefslogtreecommitdiff
path: root/biology (follow)
Commit message (Collapse)AuthorAgeFilesLines
* Fix build for -current boxes with egcs' f77 compiler.Steve Price1999-05-242-11/+29
| | | | Notes: svn path=/head/; revision=18967
* Allow this port to be built on -current i386 boxes that have egcs' f77Steve Price1999-05-241-2/+11
| | | | | | | compiler. Mark it broken for -current Alpha boxes. Notes: svn path=/head/; revision=18964
* This port doesn't build with egcs' f77 compiler.Steve Price1999-05-241-2/+7
| | | | Notes: svn path=/head/; revision=18962
* Build this port on an Alpha box instead of trying to use i386 binaries.Steve Price1999-05-241-1/+5
| | | | Notes: svn path=/head/; revision=18961
* Fix build for Alpha.Steve Price1999-05-241-1/+1
| | | | Notes: svn path=/head/; revision=18960
* Fix build on -current (Alpha) machines.Steve Price1999-05-242-18/+29
| | | | Notes: svn path=/head/; revision=18958
* Added WWW: for www-site target in DESCRSatoshi Taoka1999-05-192-2/+2
| | | | Notes: svn path=/head/; revision=18889
* Added deft and ortep3Satoshi Taoka1999-05-191-1/+3
| | | | Notes: svn path=/head/; revision=18888
* The Oak Ridge Thermal Ellipsoid Plot Program for Crystal StructureSatoshi Taoka1999-05-197-0/+594
| | | | | | | | PR: 11649 Submitted by: Ryo MIYAMOTO <rmiya@cc.hirosaki-u.ac.jp> Notes: svn path=/head/; revision=18887
* Density functional molecular orbital calculation.Satoshi Taoka1999-05-197-0/+226
| | | | | | | | PR: 11647 Submitted by: Ryo MIYAMOTO <rmiya@cc.hirosaki-u.ac.jp> Notes: svn path=/head/; revision=18886
* Fix checksumSeiichirou Hiraoka1999-05-081-1/+1
| | | | Notes: svn path=/head/; revision=18615
* Changed MASTER_SITESSatoshi Taoka1999-05-081-2/+2
| | | | | | | | PR: 11572 Submitted by: maintainer Notes: svn path=/head/; revision=18609
* Changed MASTER_SITESSatoshi Taoka1999-05-081-3/+3
| | | | | | | | PR: 11571 Submitted by: maintainer Notes: svn path=/head/; revision=18608
* Add platon and moldenSatoshi Taoka1999-05-071-1/+3
| | | | Notes: svn path=/head/; revision=18588
* display molecular orbitals and electron densities in 2D and 3DSatoshi Taoka1999-05-077-0/+201
| | | | | | | Submitted by: rmiya@cc.hirosaki-u.ac.jp (Ryo MIYAMOTO) Notes: svn path=/head/; revision=18587
* the one of crystallographic toolsSatoshi Taoka1999-05-076-0/+175
| | | | | | | Submitted by: rmiya@cc.hirosaki-u.ac.jp (Ryo MIYAMOTO) Notes: svn path=/head/; revision=18586
* Be able to use ${PREFIX}Satoshi Taoka1999-05-075-13/+67
| | | | | | | Submitted by: maintainer Notes: svn path=/head/; revision=18582
* Fixed ${CATEGORIES} (removed misc from it)Satoshi Taoka1999-05-061-2/+2
| | | | Notes: svn path=/head/; revision=18536
* Semi-empirical (MNDO, etc.) molecular orbital calculationSatoshi Taoka1999-05-0611-0/+213
| | | | | | | | PR: ports/8863 Submitted by: Ryo MIYAMOTO rmiya@cc.hirosaki-u.ac.jp Notes: svn path=/head/; revision=18535
* Plotting wavefunctions (molecular orbitals) in 3DSatoshi Taoka1999-05-069-0/+365
| | | | | | | | PR: ports/8696 Submitted by: Ryo MIYAMOTO rmiya@cc.hirosaki-u.ac.jp Notes: svn path=/head/; revision=18534
* Add mopac and psi88 (Move mopac and psi88 from misc to biology)Satoshi Taoka1999-05-061-1/+3
| | | | Notes: svn path=/head/; revision=18533
* Weasal and Wabbits and BIG FOOT.Tim Vanderhoek1999-05-026-17/+12
| | | | Notes: svn path=/head/; revision=18337
* Upgrade to 2.1.1Bill Fenner1999-03-083-8/+16
| | | | | | | | PR: ports/10228 Submitted by: Michael Haro mharo@area51.fremont.ca.us Notes: svn path=/head/; revision=17072
* Adjust port Makefiles to new EXTRACT_* variable defaults. See log ofSatoshi Asami1999-02-031-1/+3
| | | | | | | | | | | | | | | | | | | | | | bsd.port.mk rev. 1.304 for details on the change. The fix here is one of the following. (1) Define USE_BZIP2 instead of BUILD_DEPENDS on bzip2 and redefining EXTRACT_* commands. (2) Change ${EXTRACT_CMD} to ${TAR} when the command is obviously calling the "tar" command (i.e., arguments like "-xzf" are spelled out). (3) If ${EXTRACT_CMD} is called directly with ${EXTRACT_BEFORE_ARGS}, add ${EXTRACT_AFTER_ARGS} to the command line as well. (4) If any of EXTRACT_CMD, EXTRACT_BEFORE_ARGS or EXTRACT_AFTER_ARGS is set, define the other two too. Notes: svn path=/head/; revision=16518
* Correct the MD5 checksum.Vanilla I. Shu1999-01-301-1/+1
| | | | | | | Submitted by: maintainer Notes: svn path=/head/; revision=16431
* Added 'ONLY_FOR_ARCHS=i386' to XForms dependent ports.Hidetoshi Shimokawa1999-01-071-1/+4
| | | | | | | XForms has not been available for FreeBSD/alpha yet. Notes: svn path=/head/; revision=15906
* Add 'ONLY_FOR_ARCHS=i386' to linux_lib dependent ports.Hidetoshi Shimokawa1999-01-071-1/+3
| | | | Notes: svn path=/head/; revision=15902
* Change *_DEPENDS on lang/perl5 to USE_PERL5 so we won't have anySatoshi Asami1999-01-021-3/+2
| | | | | | | | | | dependencies to perl5 in -current. This might cause some unwanted perl5 installations on -stable (if it was originally RUN_DEPENDS, perl5 will now be installed during build too, etc.), but its lifetime is limited anyway. Notes: svn path=/head/; revision=15765
* Update MASTER_SITES.Bill Fumerola1998-12-092-4/+6
| | | | | | | Thanks To: Fenner's portsurvey and ftpsearch.lycos.com Notes: svn path=/head/; revision=15237
* Add a comment about setting env var 'FC' to 'g77' if EGCS is to beJoseph Koshy1998-11-181-3/+4
| | | | | | | used for building. Notes: svn path=/head/; revision=14622
* Activate tinker.Joseph Koshy1998-11-171-1/+2
| | | | Notes: svn path=/head/; revision=14598
* New port of the Tinker Molecular modelling program.Joseph Koshy1998-11-1711-0/+725
| | | | | | | | | PR: 8690 Reviewed by: jkoshy Submitted by: Glenn Johnson <gljohns@bellsouth.net> Notes: svn path=/head/; revision=14597
* Use bsd.port.{pre,post}.mk to move PORTOBJFORMAT to front, or changeSatoshi Asami1998-11-141-6/+8
| | | | | | | | shell loops to make loops. Use EXTRA_PKG_FLAGS to add install scripts instead of adding it to PKG_FLAGS after bsd.port.mk. Notes: svn path=/head/; revision=14512
* Update of MASTER_SITES.Bill Fumerola1998-11-131-2/+2
| | | | | | | | PR: ports/8600 Submitted by: frankch@waru.life.nthu.edu.tw Notes: svn path=/head/; revision=14501
* Unbreak for ELFJustin M. Seger1998-11-031-3/+1
| | | | Notes: svn path=/head/; revision=14321
* Master site changed, update MD5.Joseph Koshy1998-10-082-3/+3
| | | | | | | | PR: 8200 Submitted by: frankch@waru.life.nthu.edu.tw (maintainer) Notes: svn path=/head/; revision=13734
* Checksum changed again....Satoshi Asami1998-09-281-1/+1
| | | | Notes: svn path=/head/; revision=13509
* Remove empty doc dir on deinstall.Steve Price1998-09-271-0/+1
| | | | Notes: svn path=/head/; revision=13429
* Don't strip the binary when building ELF.Steve Price1998-09-271-1/+5
| | | | Notes: svn path=/head/; revision=13428
* Checksum of seaview.tar changed.Steve Price1998-09-271-1/+1
| | | | Notes: svn path=/head/; revision=13427
* Mark broken for ELF because of xforms port.Steve Price1998-09-261-2/+4
| | | | Notes: svn path=/head/; revision=13406
* Take the manpages out of pkg/PLIST and put them in MAN1.Steve Price1998-09-162-2/+3
| | | | Notes: svn path=/head/; revision=13165
* Unbreak by making a new checksum and fixing the makefile to find a new sourceJustin M. Seger1998-08-213-6/+4
| | | | | | | file. Notes: svn path=/head/; revision=12701
* BROKEN:Justin M. Seger1998-08-201-1/+3
| | | | | | | | # make checksum >> Checksum mismatch for seaview.tar. Notes: svn path=/head/; revision=12692
* Remove manpages from pkg/PLISTDavid E. O'Brien1998-08-131-8/+0
| | | | Notes: svn path=/head/; revision=12504
* Fix up dependencies for ports that moved into the x11-toolkits category.Satoshi Asami1998-08-071-2/+2
| | | | Notes: svn path=/head/; revision=12335
* Rename all USE_X11 to USE_X_PREFIX. Requires 1.279 (3.0-current) orSatoshi Asami1998-08-051-2/+2
| | | | | | | | 1.227.2.41 (2.2-stable) of bsd.port.mk for this to be interpreted correctly. Notes: svn path=/head/; revision=12289
* Making x11 category more useful project part 1: take out "x11" ofSatoshi Asami1998-07-272-4/+4
| | | | | | | | | ports that are mere users of X. Partial list submitted by: Josh Gilliam <josh@quick.net> Notes: svn path=/head/; revision=12173
* Another batch of "Add homepage." for benchmarks through converters.Tim Vanderhoek1998-07-251-0/+2
| | | | Notes: svn path=/head/; revision=12104
* Turn on hmmer.Steve Price1998-07-121-1/+2
| | | | Notes: svn path=/head/; revision=11872