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* - UnbreakMartin Wilke2007-04-211-3/+3
| | | | | | | | | | - Add backup MASTER_SITES PR: 111963 Submitted by: Jason Harris <jharris@widomaker.com> Notes: svn path=/head/; revision=190551
* BROKEN: UnfetchableKris Kennaway2007-04-201-0/+2
| | | | Notes: svn path=/head/; revision=190429
* [patch] cleanup non-supported FreeBSD versionsEdwin Groothuis2007-04-163-41/+1
| | | | | | | | | PR: ports/111727 Submitted by: Edwin Groothuis <edwin@mavetju.org> Approved by: Bob Zimmermann <rpz@cse.wustl.edu> Notes: svn path=/head/; revision=190149
* Remove always-true condition due to OSVERSIONEdwin Groothuis2007-04-161-1/+1
| | | | Notes: svn path=/head/; revision=190115
* - Remove unreachable OSVERSION code.Edwin Groothuis2007-04-161-13/+9
| | | | | | | - Make portlint happier Notes: svn path=/head/; revision=190114
* - Fix after objformat removalPav Lucistnik2007-03-281-0/+3
| | | | | | | Reported by: pointyhat Notes: svn path=/head/; revision=188681
* - Update to 1.5-beta2Martin Wilke2007-03-273-13/+14
| | | | | | | | | | - Pass maintainership to submitter PR: 110621 Submitted by: Nemo Liu<nemoliu@gmail.com> Notes: svn path=/head/; revision=188470
* - MASTER_SITE is back, remove BROKENGabor Kovesdan2007-03-161-2/+0
| | | | | | | | PR: ports/109954 Submitted by: Tsurutani Naoki <turutani@scphys.kyoto-u.ac.jp> Notes: svn path=/head/; revision=187549
* Reset razi@genet.sickkids.on.ca due to maintainer-timeouts and no response toMark Linimon2007-03-141-1/+1
| | | | | | | | | email. Hat: portmgr Notes: svn path=/head/; revision=187365
* Reset dbader@eece.unm.edu due to maintainer-timeouts.Mark Linimon2007-03-111-1/+1
| | | | | | | Hat: portmgr Notes: svn path=/head/; revision=187091
* Reset dbader@eece.unm.edu due to maintainer-timeout. While here, fix fetch.Mark Linimon2007-03-111-2/+2
| | | | Notes: svn path=/head/; revision=187090
* Reset chuynh@biolateral.com.au: address bounces.Mark Linimon2007-03-102-2/+2
| | | | | | | Hat: portmgr Notes: svn path=/head/; revision=187072
* - Update to 4.96Martin Wilke2007-03-093-10/+143
| | | | | | | | PR: 110080 Submitted by: Fernan Aguero<fernan@iib.unsam.edu.ar> (maintainer) Notes: svn path=/head/; revision=186994
* - Update to 34.26.2Martin Wilke2007-03-092-8/+6
| | | | | | | | PR: 110079 Submitted by: Fernan Aguero<fernan@iib.unsam.edu.ar> (maintainer) Notes: svn path=/head/; revision=186993
* - Release distfile was renamed.Martin Wilke2007-03-082-5/+5
| | | | | | | | PR: 110078 Submitted by: Fernan Aguero<fernan@iib.unsam.edu.ar> (maintainer) Notes: svn path=/head/; revision=186894
* BROKEN: UnfetchableKris Kennaway2007-02-271-0/+2
| | | | Notes: svn path=/head/; revision=186074
* - mark ignore on FreeBSD 5.xDirk Meyer2007-02-191-1/+7
| | | | | | | Approved by: maintainer Notes: svn path=/head/; revision=185488
* Schedule these broken ports for removal on 2007-04-10 if they are stillKris Kennaway2007-02-111-0/+2
| | | | | | | broken at that time and no fix has been submitted. Notes: svn path=/head/; revision=184837
* Update to 0.99rc6.Maho Nakata2007-02-092-5/+5
| | | | | | | | PR: 108940 Submitted by: CHAO Shin Notes: svn path=/head/; revision=184650
* BROKEN: Does not buildKris Kennaway2007-02-051-0/+2
| | | | Notes: svn path=/head/; revision=184205
* Use libtool port instead of included version to avoid objformat a.out botchKris Kennaway2007-02-011-0/+1
| | | | Notes: svn path=/head/; revision=183830
* - add category gnustepDirk Meyer2007-01-312-2/+2
| | | | | | | | PR: 103931 Approved by: pav Notes: svn path=/head/; revision=183799
* Build fix.Maho Nakata2007-01-291-1/+2
| | | | | | | Submitted by: kris via pointyhat and pav. Notes: svn path=/head/; revision=183588
* Update to 3.66Ion-Mihai Tetcu2007-01-272-4/+4
| | | | | | | | PR: ports/108434 Submitted by: Marcelo Araujo Notes: svn path=/head/; revision=183435
* Fix master sites, un-deprecate and update biology/recombine to 1.41.Vasil Dimov2007-01-254-86/+19
| | | | Notes: svn path=/head/; revision=183251
* Remove expired leaf port:Vasil Dimov2007-01-256-78/+0
| | | | | | | | | | | | 2007-01-07 biology/coalesce: distfile disappeared from homepage Actually the software is still available at: http://evolution.gs.washington.edu/lamarc/coalesce.html, but it is not supported by the authors. Last version is from 1995 and biology/fluctuate can be used instead. Notes: svn path=/head/; revision=183249
* Get rid of biology/coalesce dependency, it is deprecated and will be removedVasil Dimov2007-01-251-2/+2
| | | | | | | shortly. Notes: svn path=/head/; revision=183248
* Fix master site and un-deprecateVasil Dimov2007-01-251-4/+1
| | | | Notes: svn path=/head/; revision=183246
* - Fix typoMartin Wilke2007-01-231-1/+1
| | | | Notes: svn path=/head/; revision=183075
* - Project moves to a new home. Change MASTER_SITES and WWWRong-En Fan2007-01-222-2/+2
| | | | | | | | | PR: ports/108214 Submitted by: Thomas Abthorpe <thomas at goodking.ca> Approved by: Fernan Aguero <fernan at iib.unsam.edu.ar> (maintainer) Notes: svn path=/head/; revision=183029
* Fix build.Maho Nakata2007-01-191-1/+1
| | | | | | | Submitted by: kris via pointyhat. Notes: svn path=/head/; revision=182781
* Forgot to commit a patch. Fixes build.Maho Nakata2007-01-191-0/+20
| | | | | | | Submitted by: kris via pointyhat. Notes: svn path=/head/; revision=182769
* * Migrate to gfortran.Maho Nakata2007-01-172-13/+11
| | | | | | | * Bump port revision. Notes: svn path=/head/; revision=182584
* . change dependencies: shells/bash2 -> shells/bash;Boris Samorodov2007-01-161-1/+2
| | | | | | | | | | | | | | | | | | . bump PORTREVISION (RUN_DEPENDS changes); . for converters/konwert: - introduce PATCHLEVEL to be used instead of PORTREVISION at filenames; - update to new PATCHLEVEL=11. PR: 107000 [1], 107046 [2], 107106 [3], 107114 [4] Submitted by: bsam (me) Approved by: all maintainers timeout three and a half week: mij at bitchx.it [1] j.koopmann at seceidos.de [2] chuynh at biolateral.com.au [3] alexs at snark.rinet.ru [4] Notes: svn path=/head/; revision=182531
* * Migrate to gfortran.Maho Nakata2007-01-161-5/+4
| | | | | | | | | | * Bump port revision. * fix build [1]. Submitted by: kris [1] Notes: svn path=/head/; revision=182485
* - update to use new bsd.gnustep.mkDirk Meyer2007-01-131-4/+3
| | | | | | | Approved by: gurkan@linuks.mine.nu Notes: svn path=/head/; revision=182275
* * Migrate to gfortran.Maho Nakata2007-01-122-2/+7
| | | | | | | * Bump port revision. Notes: svn path=/head/; revision=182197
* Using gfortran42 only. not using gcc42.Maho Nakata2007-01-121-3/+5
| | | | | | | Bump portrevision. Notes: svn path=/head/; revision=182137
* Using only gfortran42. not gcc42.Maho Nakata2007-01-122-6/+10
| | | | | | | Bump portrevision. Notes: svn path=/head/; revision=182136
* * Add dummy knob WANT_FORTRAN for future gfortranMaho Nakata2007-01-092-127/+147
| | | | | | | | migration. currently it is not buildable with gfrotran42. * Honor FC and FFLAGS. Notes: svn path=/head/; revision=181827
* migrated to gfortran.Maho Nakata2007-01-091-0/+3
| | | | Notes: svn path=/head/; revision=181823
* Migrated to gfortran.Maho Nakata2007-01-093-6/+13
| | | | Notes: svn path=/head/; revision=181822
* The BioCocoa framework provides developers with the opportunity to addDirk Meyer2006-12-305-0/+45
| | | | | | | | | | | | support for reading and writing BEAST, Clustal, EMBL, Fasta, GCG-MSF, GDE, Hennig86, NCBI, NEXUS, NONA, PDB, Phylip, PIR, Plain/Raw, Swiss-Prot and TNT files by writing only three lines of code. The framework is written in Cocoa (Objective-C). WWW: http://bioinformatics.org/biococoa/ Notes: svn path=/head/; revision=181036
* - Update to 1.0.1Martin Wilke2006-12-293-97/+98
| | | | | | | | | | | - Update MASTER_SITES - Pass maintainership to submitter PR: ports/107246 Submitted by: Fernan Aguero<fernan@iib.unsam.edu.ar> (maintainer) Notes: svn path=/head/; revision=181012
* Update to v0.15Aaron Dalton2006-12-273-40/+40
| | | | Notes: svn path=/head/; revision=180879
* Reset tonymaher@optusnet.com.au due to maintainer-timeouts and no responseMark Linimon2006-12-265-5/+5
| | | | | | | | | to email. Hat: portmgr Notes: svn path=/head/; revision=180796
* - Update to 5.1.2Martin Wilke2006-12-2311-236/+308
| | | | | | | | | | - Update maintainer mail adresse PR: ports/107118 Submitted by: M. L. Dodson <bdodson@houston.rr.com> (maintainer) Notes: svn path=/head/; revision=180626
* - Update to 1.03Rong-En Fan2006-12-193-105/+42
| | | | | | | | | PR: ports/106300 Submitted by: chinsan Approved by: maintainer timeout (15 days) Notes: svn path=/head/; revision=180115
* Reset dbader@ece.unm.edu due to timeouts and no response to email.Mark Linimon2006-12-132-2/+2
| | | | | | | Hat: portmgr Notes: svn path=/head/; revision=179659
* Reset whitekid@gmail.com after timeouts and no response to email.Mark Linimon2006-12-131-1/+1
| | | | | | | Hat: portmgr Notes: svn path=/head/; revision=179658
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