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* biology/py-cutadapt: Upgrade to 2.3Jason W. Bacon2019-04-272-5/+4
* Clean up plistAntoine Brodin2019-04-251-1/+1
* biology/minimap2: Pairwise aligner for genomic and spliced nucleotide sequencesJason W. Bacon2019-04-245-0/+87
* biology/bowtie2: Clarify CPU-specificityJason W. Bacon2019-04-241-1/+2
* biology/star: Modify PKGBASE to avoid conflict with archivers/starJason W. Bacon2019-04-231-0/+1
* Fix typoSunpoet Po-Chuan Hsieh2019-04-231-2/+2
* Sort PLISTSunpoet Po-Chuan Hsieh2019-04-222-23/+23
* Related to revision 499061 bump ports with USES=fortran to have themGerald Pfeifer2019-04-224-4/+4
* biology/star: Spliced Transcripts Alignment to a ReferenceJason W. Bacon2019-04-216-0/+70
* biology/bowtie2: Upgrade to 2.3.5.1Jason W. Bacon2019-04-214-13/+42
* biology/canu: Fix build on powerpc64 and aarch64Jason W. Bacon2019-04-184-20/+141
* New port: biology/py-xenaPython: API for Xena Hub to access genetic informati...Yuri Victorovich2019-04-124-0/+32
* devel/boost-*: update to 1.70.0Jan Beich2019-04-127-3/+7
* Bump a few PORTREVISIONs after r498529Antoine Brodin2019-04-105-1/+5
* Update devel/readline to 8.0Sunpoet Po-Chuan Hsieh2019-04-091-1/+1
* Use real PORTVERSION of devel/p5-Parse-RecDescentSunpoet Po-Chuan Hsieh2019-04-061-1/+1
* biology/igv: Update 2.4.19 -> 2.5.0Yuri Victorovich2019-04-042-6/+6
* - Fix build in head i386Danilo Egea Gondolfo2019-04-011-0/+1
* biology/py-fastTSNE: Add the PORTSCOUT lineYuri Victorovich2019-03-311-0/+2
* biology/ngs-sdk: Update 2.9.4 -> 2.9.6Yuri Victorovich2019-03-313-5/+5
* - Add LICENSEDmitry Marakasov2019-03-301-4/+4
* Mark as broken on aarch64:Mark Linimon2019-03-291-0/+2
* biology/p5-TrimGalore: Upgrade to 0.6.1Jason W. Bacon2019-03-244-11/+39
* biology/py-cutadapt: Upgrade to 2.1Jason W. Bacon2019-03-242-7/+13
* UnbreakAntoine Brodin2019-03-242-2/+2
* biology/py-dnaio: Read and write FASTQ and FASTAJason W. Bacon2019-03-244-0/+27
* biology/bowtie2: Upgrade to 2.3.5Jason W. Bacon2019-03-185-41/+111
* Qt4 deprecation: Remove Qt4 and its consumes.Tobias C. Berner2019-03-165-62/+0
* biology/cd-hit: Upgrade to 4.8.1Jason W. Bacon2019-03-144-14/+106
* biology/bedtools: unbreak with libc++ 8Jan Beich2019-03-041-0/+5
* biology/paml: Update to version 4.9iJoseph Mingrone2019-02-263-4/+6
* New port: biology/abyss: Assembly By Short Sequences: parallel, paired-end se...Yuri Victorovich2019-02-256-0/+116
* kallisto: Upgrade to 0.45.1, unbundle hstlibJason W. Bacon2019-02-245-16/+65
* biology/unanimity: Upgrade to 3.4.1Jason W. Bacon2019-02-243-5/+5
* biology/ngs-sdk: Update 2.9.3 -> 2.9.4Yuri Victorovich2019-02-233-5/+5
* biology/igv: Update 2.4.16 -> 2.4.19Yuri Victorovich2019-02-232-6/+6
* biology/unanimity is not compatible with python 3.xAntoine Brodin2019-02-222-2/+2
* Update to 1.007005 (1.7.5)Sunpoet Po-Chuan Hsieh2019-02-223-17/+2
* biology/iqtree: Update to version 1.6.10Joseph Mingrone2019-02-212-5/+4
* Update to 1.007003Sunpoet Po-Chuan Hsieh2019-02-204-67/+16
* Update to 1.007004 (1.7.4)Sunpoet Po-Chuan Hsieh2019-02-205-998/+189
* Add p5-Bio-Cluster 1.7.3Sunpoet Po-Chuan Hsieh2019-02-205-0/+55
* biology/pbseqan: Mark deprecatedJason W. Bacon2019-02-201-0/+2
* biology/unanimity: Upgrade to 3.4.0Jason W. Bacon2019-02-2010-70/+133
* biology/pbbam: Upgrade to 0.18.0 releaseJason W. Bacon2019-02-194-23/+47
* biology/pbcopper: Upgrade to 0.4.1 releaseJason W. Bacon2019-02-195-38/+26
* vec_splats function is not supported by base GCC. Add USES=compiler:c11Mark Linimon2019-02-181-2/+2
* biology/pbseqan: Minor upgrade to latest commitJason W. Bacon2019-02-172-6/+6
* Update dns/libidn2 to 2.1.1Sunpoet Po-Chuan Hsieh2019-02-092-2/+2
* biology/checkm: Update 1.0.12 -> 1.0.13Yuri Victorovich2019-02-092-5/+4
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