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1999-01-02Change *_DEPENDS on lang/perl5 to USE_PERL5 so we won't have anySatoshi Asami1-3/+2
dependencies to perl5 in -current. This might cause some unwanted perl5 installations on -stable (if it was originally RUN_DEPENDS, perl5 will now be installed during build too, etc.), but its lifetime is limited anyway. Notes: svn path=/head/; revision=15765
1998-12-09Update MASTER_SITES.Bill Fumerola2-4/+6
Thanks To: Fenner's portsurvey and ftpsearch.lycos.com Notes: svn path=/head/; revision=15237
1998-11-18Add a comment about setting env var 'FC' to 'g77' if EGCS is to beJoseph Koshy1-3/+4
used for building. Notes: svn path=/head/; revision=14622
1998-11-17Activate tinker.Joseph Koshy1-1/+2
Notes: svn path=/head/; revision=14598
1998-11-17New port of the Tinker Molecular modelling program.Joseph Koshy11-0/+725
PR: 8690 Reviewed by: jkoshy Submitted by: Glenn Johnson <gljohns@bellsouth.net> Notes: svn path=/head/; revision=14597
1998-11-14Use bsd.port.{pre,post}.mk to move PORTOBJFORMAT to front, or changeSatoshi Asami1-6/+8
shell loops to make loops. Use EXTRA_PKG_FLAGS to add install scripts instead of adding it to PKG_FLAGS after bsd.port.mk. Notes: svn path=/head/; revision=14512
1998-11-13Update of MASTER_SITES.Bill Fumerola1-2/+2
PR: ports/8600 Submitted by: frankch@waru.life.nthu.edu.tw Notes: svn path=/head/; revision=14501
1998-11-03Unbreak for ELFJustin M. Seger1-3/+1
Notes: svn path=/head/; revision=14321
1998-10-08Master site changed, update MD5.Joseph Koshy2-3/+3
PR: 8200 Submitted by: frankch@waru.life.nthu.edu.tw (maintainer) Notes: svn path=/head/; revision=13734
1998-09-28Checksum changed again....Satoshi Asami1-1/+1
Notes: svn path=/head/; revision=13509
1998-09-27Remove empty doc dir on deinstall.Steve Price1-0/+1
Notes: svn path=/head/; revision=13429
1998-09-27Don't strip the binary when building ELF.Steve Price1-1/+5
Notes: svn path=/head/; revision=13428
1998-09-27Checksum of seaview.tar changed.Steve Price1-1/+1
Notes: svn path=/head/; revision=13427
1998-09-26Mark broken for ELF because of xforms port.Steve Price1-2/+4
Notes: svn path=/head/; revision=13406
1998-09-16Take the manpages out of pkg/PLIST and put them in MAN1.Steve Price2-2/+3
Notes: svn path=/head/; revision=13165
1998-08-21Unbreak by making a new checksum and fixing the makefile to find a new sourceJustin M. Seger3-6/+4
file. Notes: svn path=/head/; revision=12701
1998-08-20BROKEN:Justin M. Seger1-1/+3
# make checksum >> Checksum mismatch for seaview.tar. Notes: svn path=/head/; revision=12692
1998-08-13Remove manpages from pkg/PLISTDavid E. O'Brien1-8/+0
Notes: svn path=/head/; revision=12504
1998-08-07Fix up dependencies for ports that moved into the x11-toolkits category.Satoshi Asami1-2/+2
Notes: svn path=/head/; revision=12335
1998-08-05Rename all USE_X11 to USE_X_PREFIX. Requires 1.279 (3.0-current) orSatoshi Asami1-2/+2
1.227.2.41 (2.2-stable) of bsd.port.mk for this to be interpreted correctly. Notes: svn path=/head/; revision=12289
1998-07-27Making x11 category more useful project part 1: take out "x11" ofSatoshi Asami2-4/+4
ports that are mere users of X. Partial list submitted by: Josh Gilliam <josh@quick.net> Notes: svn path=/head/; revision=12173
1998-07-25Another batch of "Add homepage." for benchmarks through converters.Tim Vanderhoek1-0/+2
Notes: svn path=/head/; revision=12104
1998-07-12Turn on hmmer.Steve Price1-1/+2
Notes: svn path=/head/; revision=11872
1998-07-12Initial import of hmmer version 2.0.Steve Price6-0/+86
Profile hidden Markov models for biological sequence analysis. PR: 7120 Submitted by: Matthew Jason Euclid Barnhart <barnhart@sequencer.wustl.edu> Notes: svn path=/head/; revision=11871
1998-05-24Update to 2.6b2.1.Steve Price3-7/+7
PR: 6673 Submitted by: maintainer Notes: svn path=/head/; revision=11122
1998-03-30mkdir -> ${MKDIR}. This also has the side-effect of making thisSatoshi Asami1-2/+2
port reinstall-friendly. Notes: svn path=/head/; revision=10380
1998-03-17Add DIST_SUBDIR, the name "periodic.tab" is kinda generic. Speaking of which,Satoshi Asami2-7/+8
its checksum was different so fix it too. Notes: svn path=/head/; revision=10207
1998-03-16Add linux_lib DEPEND lines.Justin M. Seger1-1/+4
PR: 5816 Submitted by: frankch@waru.life.nthu.edu.tw Notes: svn path=/head/; revision=10198
1998-03-16Activate povchem.Vanilla I. Shu1-1/+2
Notes: svn path=/head/; revision=10174
1998-03-16Povchem is a tool to generate POV file from a PDB(ProteinVanilla I. Shu7-0/+78
DataBank) entry. One can adjust many parameters for a high quality molecular graphic. PR: ports/6008 Submitted by: Frank Chen Hsiung Chan <frankch@waru.life.nthu.edu.tw> Notes: svn path=/head/; revision=10173
1998-01-29Activate kinemageJustin M. Seger1-1/+2
Notes: svn path=/head/; revision=9513
1998-01-29Import of ports/biology/kinemage 4.2Justin M. Seger5-0/+37
Kinemage is a molecular visualization program. It is very suitable for educational usage. PR: ports/5217 Submitted by: frankch@waru.life.nthu.edu.tw Notes: svn path=/head/; revision=9512
1997-12-26Typo (LIB_DEPEND -> LIB_DEPENDS).Satoshi Asami1-2/+2
Notes: svn path=/head/; revision=9191
1997-12-24Move pkg/INSTALL to pkg/MESSAGE, add another patch from maintainer.Vanilla I. Shu3-6/+14
PR: ports/5361 Reviewed by: asami Submitted by: maintainer Notes: svn path=/head/; revision=9162
1997-12-21Activate seaview.Vanilla I. Shu1-1/+2
Notes: svn path=/head/; revision=9151
1997-12-21Seaview is a multiple DNA sequence alignment editor.Vanilla I. Shu6-0/+72
It is capable of align DNA sequences from various organisms and assign their position in the phylogenic tree. PR: ports/5229 Submitted by: Frank Chen Hsiung Chan <frankch@waru.life.nthu.edu.tw> Notes: svn path=/head/; revision=9150
1997-12-21Activate babel.Vanilla I. Shu1-1/+2
Notes: svn path=/head/; revision=9149
1997-12-21This is a port of a molecular file format converter, babel.Vanilla I. Shu7-0/+95
Babel is developed by Dolata Group, Department of Chemistry, University of Arizona and Ohio State University. PR: ports/5215 Submitted by: Frank Chen Hsiung Chan <frankch@waru.life.nthu.edu.tw> Notes: svn path=/head/; revision=9147
1997-12-15Activate rasmol.Vanilla I. Shu1-2/+2
Notes: svn path=/head/; revision=9084
1997-12-15rasmol is a biological molecule visualization program.Vanilla I. Shu6-0/+46
PR: ports/5214 Submitted by: frankch@waru.life.nthu.edu.tw Notes: svn path=/head/; revision=9083
1997-12-13The new ports category "biology" starts here today. No DarwinSatoshi Asami2-0/+7
jokes please! Notes: svn path=/head/; revision=9066
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