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2015-08-08biology/seqtools: 4.35 -> 4.36Kurt Jaeger2-3/+3
2015-08-05Fix build on mips by properly respecting compiler and flagsDmitry Marakasov2-9/+20
2015-08-05Update to 1.65.Mathieu Arnold2-4/+4
2015-07-28UnbreakAntoine Brodin1-1/+1
2015-07-25- Fix four cases of an obvious typo: LICENSE_FILES -> LICENSE_FILEAlexey Dokuchaev1-2/+2
2015-07-15- Update Unipro UGENE to version 1.17.0 (documentation was also rerolled)Alexey Dokuchaev2-16/+11
2015-07-12- Update to 1.14.0Danilo Egea Gondolfo3-4/+5
2015-07-07biology/seqtools: 4.34.1 -> 4.35Kurt Jaeger2-5/+5
2015-06-29After r390893, chmod u+w/u-w for stripping perl XS modules is unnecessary,Adam Weinberger1-5/+2
2015-06-28- Update optionsWen Heping1-7/+1
2015-06-28- Update to 3.6.11Wen Heping2-15/+10
2015-06-27Use BROKEN helpersBaptiste Daroussin1-6/+2
2015-06-27Use BROKEN helpersBaptiste Daroussin1-5/+5
2015-06-25- Add LICENSEDmitry Marakasov1-1/+12
2015-06-24Start removing MASTER_SITE_SUBDIR=CPAN:username where possible. TheAdam Weinberger1-1/+0
2015-06-23Convert to COPYTREE_SHAREBaptiste Daroussin1-9/+6
2015-06-22Convert to USES=jpegAntoine Brodin1-1/+1
2015-06-11- Fix shebangsDmitry Marakasov1-1/+3
2015-06-05New port: biology/bcftoolsKurt Jaeger10-0/+178
2015-06-03- Strip binariesDmitry Marakasov1-1/+2
2015-06-03biology/mafft: update 7.149 -> 7.221Bartek Rutkowski3-8/+7
2015-05-31- Add NO_ARCHDmitry Marakasov1-0/+1
2015-05-30- Fix shebangsDmitry Marakasov1-3/+9
2015-05-28Update Unipro UGENE to version 1.16.2.Alexey Dokuchaev3-3/+5
2015-05-22Remove $FreeBSD$ from patches files in categories a-j.Mathieu Arnold7-20/+0
2015-05-22biology/seaview: Update version 4.5.4=>4.5.4.4Muhammad Moinur Rahman2-3/+4
2015-05-18- Update to 7.1.3Wen Heping4-20/+22
2015-05-18- Update to 3.6.9 and unbreakWen Heping2-5/+3
2015-05-14MASTER_SITES cleanup.Mathieu Arnold3-7/+4
2015-05-12- Update to 5.11.4Wen Heping3-4/+10
2015-05-11Cleanup DIST* variables.Mathieu Arnold1-2/+1
2015-05-08Reassign biology/ perl modules to perl@.Adam Weinberger8-21/+22
2015-05-07- Update to 36.3.7aWen Heping3-6/+11
2015-05-06biology/seqtools: 4.33 -> 4.34.1Kurt Jaeger3-3/+7
2015-05-06Update ports in the [bcd]* categories to not use GH_COMMIT.Mathieu Arnold4-7/+4
2015-05-04- UnbreakWen Heping2-2/+11
2015-04-28Mark BROKEN: fails to configureAntoine Brodin1-0/+2
2015-04-25biology/ncbi-blast+: Add additionl MASTER_SITE to unbreak fetchJohn Marino1-3/+2
2015-04-13${ENV} does not exist, it is called ${SETENV}.Mathieu Arnold1-1/+1
2015-04-11biology/seaview: Unbreak -- it fetches fineJohn Marino1-4/+1
2015-04-11biology/platon: Upgrade from 05 MAR 2015 => 30 MAR 2015 to unbreakJohn Marino2-6/+5
2015-04-11biology/p5-Bio-ASN1-EntrezGene: bump PORTEPOCHJohn Marino1-0/+1
2015-04-11biology/p5-Bio-ASN1-EntrezGene: Upgrade 1.09 => 1.70 to unbreakJohn Marino3-15/+15
2015-04-10Update biology/paml to 4.8a and unbreak.Brad Davis2-7/+5
2015-04-09Convert bsd.gnustep.mk to USES=gnustepBaptiste Daroussin1-4/+2
2015-04-05Mark as broken unfetchable portsBaptiste Daroussin10-0/+18
2015-04-03biology/ruby-bio: mark broken with ruby 2.2Steve Wills1-1/+7
2015-04-02- Remove deprecated optionDmitry Marakasov1-9/+16
2015-03-31biology/seqtools: 4.32 -> 4.33Kurt Jaeger2-3/+3
2015-03-28- Add LICENSESunpoet Po-Chuan Hsieh1-4/+6
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