diff options
Diffstat (limited to 'science/gamess/files/patch-lked')
-rw-r--r-- | science/gamess/files/patch-lked | 288 |
1 files changed, 0 insertions, 288 deletions
diff --git a/science/gamess/files/patch-lked b/science/gamess/files/patch-lked deleted file mode 100644 index e9075b2fc12d..000000000000 --- a/science/gamess/files/patch-lked +++ /dev/null @@ -1,288 +0,0 @@ ---- lked.orig 2012-10-27 01:12:07.000000000 +0900 -+++ lked 2013-02-27 16:06:32.000000000 +0900 -@@ -57,6 +57,8 @@ - set VB2000=false - if ($TARGET == linux64) set VB2000=true - if ($TARGET == linux32) set VB2000=true -+if ($TARGET == freebsd64) set VB2000=true -+if ($TARGET == freebsd32) set VB2000=true - if ($TARGET == mac64) set VB2000=true - set XMVB=false - # -@@ -632,6 +634,243 @@ - endif - # - endif -+ -+if ($TARGET == freebsd32) then -+ set VECTOR=' ' -+ set QUICHE='zunix.o' -+# -+# settings which depend on the compiler choice: -+# -+ switch ($GMS_FORTRAN) -+ case g77: -+ set LDR='g77' -+ set LDOPTS=' ' # add '-Wl,-M' to see load map -+ set FORTLIBS=' ' -+ breaksw -+ case gfortran: -+ set LDR=%%FC%% -+ set LDOPTS=' ' -+ set FORTLIBS=' ' -+ breaksw -+ case ifort: -+ set LDR='ifort' -+ set LDOPTS=' ' # add '-Wl,-M' to see load map -+ set FORTLIBS='-Vaxlib' -+ breaksw -+ case f2c: -+ set LDR='gcc' -+ set LDOPTS=' ' -+ set FORTLIBS='-lf2c -lm' -+ breaksw -+ default: -+ echo Please spell your freebsd32 compiler correctly. -+ exit 4 -+ endsw -+# -+# settings which depend on the math library: mkl, atlas, acml, none -+# -+ switch ($GMS_MATHLIB) -+ -+# for MKL, we lack experience. The following is the 64-bit -+# stuff, with all 64's removed. It might be right! -+# For the case of "11", this has actually been verified. -+ case mkl: -+ set mpath=$GMS_MATHLIB_PATH -+ switch ($GMS_MKL_VERNO) -+ case 8: -+ set MATHLIBS="-L$mpath -lmkl_lapack -lmkl -lguide -lpthread" -+ breaksw -+ case 9: -+ set MATHLIBS="-L$mpath -lmkl_lapack -lmkl -lguide -lpthread" -+ breaksw -+ case 10: -+ # next one forces single-threaded usage only...exactly what we want. -+ set MATHLIBS="-L$mpath -lmkl_intel -lmkl_sequential -lmkl_core" -+ breaksw -+ case 11: -+ case 12: -+ # next attempts a static link, whereas 10 above is a dynamic link. -+ # if this fails to work, try the version 10 lines shown just above. -+ set MATHLIBS="$mpath/libmkl_intel.a" -+ set MATHLIBS="$MATHLIBS $mpath/libmkl_sequential.a" -+ set MATHLIBS="$MATHLIBS $mpath/libmkl_core.a" -+ breaksw -+ default: -+ echo "unknown version number for MKL/linux32" -+ echo "please edit 'lked' to select the right 32 bit MKL libraries." -+ exit -+ breaksw -+ endsw -+ set BLAS=' ' -+ breaksw -+ -+ case atlas: -+ # If the ATLAS comes with static libraries, link to them, -+ # so that only the compile node has to have the libraries. -+ # Otherwise, attempt a link against shared object libs. -+ # See the 64 bit Atlas below for a way to fix the linker's -+ # not being able to locate -lf77blas, if that happens. -+ if (-e $GMS_MATHLIB_PATH/libf77blas.a) then -+ set MATHLIBS="$GMS_MATHLIB_PATH/libf77blas.a" -+ set MATHLIBS="$MATHLIBS $GMS_MATHLIB_PATH/libatlas.a" -+ else -+ set MATHLIBS="-L$GMS_MATHLIB_PATH -lf77blas -latlas" -+ endif -+ set BLAS=' ' -+ breaksw -+ -+ case acml: -+ # do a static link so that only compile node needs to install ACML -+ set MATHLIBS="$GMS_MATHLIB_PATH/libacml.a" -+ set BLAS=' ' -+ breaksw -+ -+ case none: -+ default: -+ echo "Warning. No math library was found, you should install one." -+ echo " MP2 calculations speed up about 2x with a math library." -+ echo "CCSD(T) calculations speed up about 5x with a math library." -+ set BLAS='%%BLAS%% %%LAPACK%%' -+ set MATHLIBS=' ' -+ breaksw -+ endsw -+# -+ set LIBRARIES="$FORTLIBS $MATHLIBS" -+endif -+# -+# ------ FreeBSD on 64 bit chips ----- -+# -+if ($TARGET == freebsd64) then -+ set VECTOR=' ' -+ set QUICHE='zunix.o' -+# -+# settings which depend on the FORTRAN: -+# -+ switch ($GMS_FORTRAN) -+ case gfortran: -+ set LDR=%%FC%% -+ set LDOPTS=' ' -+ set FORTLIBS=' ' -+ breaksw -+ case ifort: -+ set LDR='ifort' -+ set LDOPTS='-i8' # -Wl,-M generates a load map -+# this auxiliary library seems to have disappeared in ifort 10 -+ set FORTLIBS=' ' -+ if($GMS_IFORT_VERNO < 10) set FORTLIBS='-Vaxlib' -+ breaksw -+ default: -+ echo "don't know how to use a freebsd64 compiler named $GMS_FORTRAN" -+ exit 4 -+ breaksw -+ endsw -+# -+# settings which depend on the math library: mkl, atlas, acml, none -+# -+ switch ($GMS_MATHLIB) -+ -+ case mkl: -+ set mpath=$GMS_MATHLIB_PATH -+ set mklver=$GMS_MKL_VERNO -+ if ($CCHEM == true) set mklver=${mklver}-so -+ switch ($mklver) -+ case 8: -+ set MATHLIBS="-L$mpath -lmkl_lapack64 -lmkl -lguide -lpthread" -+ breaksw -+ case 9: -+ set MATHLIBS="-L$mpath -lmkl_lapack -lmkl -lguide -lpthread" -+ breaksw -+ breaksw -+ case 10: -+ case 11: -+ case 12: -+ # next are a static link, in single-threaded mode (serial BLAS). -+ # The choices preclude any need to -+ # a) install .so shared object libraries on every node, -+ # b) define LD_LIBRARY_PATH to find the .so libraries, or -+ # c) define MKL_NUM_THREADS=1 -+ # If desired, there is a single-threaded shared object link below. -+ # Note, there's now a gfortran-specific compiler interface library. -+ set iflib=intel -+ if ($GMS_FORTRAN == gfortran) set iflib=gf -+ set MATHLIBS=" $mpath/libmkl_${iflib}_ilp64.a" -+ set MATHLIBS="$MATHLIBS $mpath/libmkl_sequential.a" -+ set MATHLIBS="$MATHLIBS $mpath/libmkl_core.a" -+ breaksw -+ case 10-so: -+ case 11-so: -+ case 12-so: -+ # next one chooses dynamic linking (so= shared object libs) -+ # Just hand edit GMS_MKL_VERNO in your 'install.info' to use this. -+ # run-time libs (and LD_LIBRARY_PATH) needed on every compute node! -+ # note that it does force single-threaded usage. -+ # LIBCCHEM fails to link properly against static libraries. -+ # LIBCCHEM prefers to use threading -+ set iflib=intel -+ if ($GMS_FORTRAN == gfortran) set iflib=gf -+ if ($CCHEM == false) then -+ set MATHLIBS="-L$mpath -lmkl_${iflib}_ilp64 -lmkl_sequential -lmkl_core" -+ else -+ set MATHLIBS="-L$mpath -lmkl_${iflib}_ilp64 -lmkl_${iflib}_thread -lmkl_core -liomp5" -+ endif -+ breaksw -+ default: -+ echo "unknown version number for MKL/linux64" -+ echo "please edit 'lked' to select the right 64 bit MKL libraries." -+ exit -+ breaksw -+ endsw -+ set BLAS=' ' -+ breaksw -+ -+ case atlas: -+ # If the ATLAS comes with static libraries, link to them, -+ # so that only the compile node has to have the libraries. -+ # Otherwise, attempt a link against shared object libs. -+ # -+ # Some versions of Atlas come without proper setup to use them. -+ # For example, you may need to give some specific version such -+ # as 3.0 some generic names, by doing the right soft links: -+ # chdir /usr/lib64/atlas (just 'lib' for linux32) -+ # ln -s libatlas.so.3.0 libatlas.so -+ # ln -s libblas.so.3.0 libblas.so -+ # ln -s libcblas.so.3.0 libcblas.so -+ # ln -s libf77blas.so.3.0 libf77blas.so -+ # ln -s liblapack_atlas.so.3.0 liblapack.so -+ # ln -s liblapack.so.3.0 liblapack.so -+ # It is strange the RPM's don't do these soft links for us. -+ if (-e $GMS_MATHLIB_PATH/libf77blas.a) then -+ set MATHLIBS="$GMS_MATHLIB_PATH/libf77blas.a" -+ set MATHLIBS="$MATHLIBS $GMS_MATHLIB_PATH/libatlas.a" -+ else -+ set MATHLIBS="-L$GMS_MATHLIB_PATH -lf77blas -latlas" -+ endif -+ set BLAS=' ' -+ breaksw -+ -+ case acml: -+ # do a static link so that only compile node needs to install ACML -+ set MATHLIBS="$GMS_MATHLIB_PATH/libacml.a" -+ # if you want to try a dynamic link, use this: -+ #---set MATHLIBS="-L$GMS_MATHLIB_PATH -lacml -lacml_mv" -+ set BLAS=' ' -+ breaksw -+ -+ case none: -+ default: -+ echo "Warning. No math library was found, you should install one." -+ echo " MP2 calculations speed up about 2x with a math library." -+ echo "CCSD(T) calculations speed up about 5x with a math library." -+ set BLAS='%%BLAS%% %%LAPACK%%' -+ set MATHLIBS=' ' -+ breaksw -+ endsw -+# -+ set LIBRARIES="$FORTLIBS $MATHLIBS" -+endif -+# -+endif -+ - # - # MacIntosh - # -@@ -675,6 +914,23 @@ - set VECTOR=' ' - set QUICHE='zunix.o' - endif -+#FreeBSD settings -+if ($TARGET == freebsd32) then -+ set LDR=%%FC%% -+ set LDOPTS='%%LDFLAGS%%' -+ set LIBRARIES='' -+ set BLAS="-L%%LOCALBASE%%/lib %%BLAS%% %%LIBSVM%% %%LIBG2C%%" -+ set VECTOR=' ' -+ set QUICHE='zunix.o' -+endif -+if ($TARGET == freebsd64) then -+ set LDR=%%FC%% -+ set LDOPTS='%%LDFLAGS%%' -+ set LIBRARIES='' -+ set BLAS="-L%%LOCALBASE%%/lib %%BLAS%%" -+ set VECTOR=' ' -+ set QUICHE='zunix.o' -+endif - # - if ($TARGET == necsx) then - set LDR='f90' -@@ -1199,6 +1199,8 @@ - case ibm64: - case linux32: - case linux64: -+ case freebsd32: -+ case freebsd64: - case mac32: - case mac64: - case sgi32: |