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-rw-r--r--science/afni/Makefile36
1 files changed, 20 insertions, 16 deletions
diff --git a/science/afni/Makefile b/science/afni/Makefile
index 7c3c29b56fc7..dc3aa6e7d92d 100644
--- a/science/afni/Makefile
+++ b/science/afni/Makefile
@@ -16,14 +16,14 @@
# Makefile.BSD, which is included in the source distribution.
PORTNAME= afni
-PORTVERSION= 2006.03.21.1314
+PORTVERSION= 2006.06.30.1332
CATEGORIES= science biology graphics
-MASTER_SITES= http://afni.nimh.nih.gov/pub/dist/tgz/ \
- http://www.neuro.mcw.edu/~bacon/Ports/distfiles/AFNI/${PORTVERSION}/
-DISTFILES= afni_src.tgz afni_doc.tgz afni.1 Makefile.FreeBSD_PORT \
- TTatlas+tlrc.BRIK.gz TTatlas+tlrc.HEAD CA_EZ_v1.3b-Mar1506.tgz
+MASTER_SITES= http://www.neuro.mcw.edu/~bacon/Ports/distfiles/AFNI/${PORTVERSION}/ \
+ http://afni.nimh.nih.gov/pub/dist/tgz/
+DISTFILES= afni_src.tgz afni_doc.tgz afni.1 \
+ TTatlas+tlrc.BRIK.gz TTatlas+tlrc.HEAD CA_EZ_v1.3c-May0806.tgz
DIST_SUBDIR= AFNI-${PORTVERSION}
-EXTRACT_ONLY= afni_src.tgz afni_doc.tgz CA_EZ_v1.3b-Mar1506.tgz
+EXTRACT_ONLY= afni_src.tgz afni_doc.tgz CA_EZ_v1.3c-May0806.tgz
MAINTAINER= bacon@smithers.neuro.mcw.edu
COMMENT= Advanced Functional Neuro Imaging
@@ -36,7 +36,7 @@ RUN_DEPENDS= cjpeg:${PORTSDIR}/graphics/jpeg \
.include <bsd.port.pre.mk>
.if ${ARCH} == "sparc64"
-BROKEN= Does not compile on sparc64: "undefined reference to '_mcount'"
+BROKEN= Does not compile on sparc64: "undefined reference to `_mcount'"
.endif
USE_GETTEXT= yes
@@ -49,8 +49,6 @@ WRKSRC= ${WRKDIR}/afni_src
MAKEFILE= Makefile.FreeBSD_PORT
ALL_TARGET= vastness suma
-SUB_FILES= pkg-message
-
###########################################################################
# Install parameters
@@ -66,6 +64,7 @@ SCRIPTS=\
@Center_Distance \
@CheckForAfniDset \
@CommandGlobb \
+ @DoPerRoi.py \
@DTI_studio_reposition \
@FromRAI \
@GetAfniOrient \
@@ -76,6 +75,7 @@ SCRIPTS=\
@Purify_1D \
@RenamePanga \
@SUMA_AlignToExperiment \
+ @SUMA_Make_Spec_Caret \
@SUMA_Make_Spec_FS \
@SUMA_Make_Spec_SF \
@ToRAI \
@@ -90,6 +90,7 @@ SCRIPTS=\
@np \
@parse_afni_name \
@parse_name \
+ afni_base.py \
3dMax \
suma_change_spec
@@ -99,15 +100,18 @@ INSTALL_WRKSRC= ${WRKSRC}/BSD
INSTALL_TEMP= ${WRKSRC}/Backup.BSD
post-extract:
- ${CP} -f ${DISTDIR}/${DIST_SUBDIR}/Makefile.FreeBSD_PORT ${WRKSRC}
+ ${CP} -f ${FILESDIR}/Makefile.FreeBSD_PORT ${WRKSRC}
+ ${CP} ${DISTDIR}/${DIST_SUBDIR}/afni.1 ${WRKDIR}
+ ${REINPLACE_CMD} -e 's|%%PREFIX%%|${PREFIX}|g' ${WRKDIR}/afni.1
do-install:
- ${MKDIR} ${DATADIR} ${INSTALL_TEMP}
+ ${MKDIR} ${DATADIR} ${INSTALL_TEMP} \
+ ${PREFIX}/lib/afni ${PREFIX}/include/afni
@${MV} ${INSTALL_WRKSRC}/libf2c.a ${INSTALL_TEMP}
${INSTALL_DATA} ${INSTALL_WRKSRC}/*.so ${INSTALL_WRKSRC}/*.a \
- ${PREFIX}/lib
+ ${PREFIX}/lib/afni
${INSTALL_DATA} ${INSTALL_WRKSRC}/*.h \
- ${PREFIX}/include
+ ${PREFIX}/include/afni
${INSTALL_DATA} ${INSTALL_WRKSRC}/*.jpg ${INSTALL_WRKSRC}/*.txt \
${DATADIR}
@${MV} ${INSTALL_WRKSRC}/*.so \
@@ -126,8 +130,8 @@ do-install:
.endfor
${INSTALL_PROGRAM} ${INSTALL_WRKSRC}/* ${PREFIX}/bin
${INSTALL_DATA} ${DISTDIR}/${DIST_SUBDIR}/TTatlas* ${DATADIR}
- ${INSTALL_DATA} ${WRKDIR}/CA_EZ_v1.3b-Mar1506/* ${DATADIR}
- ${INSTALL_MAN} ${DISTDIR}/${DIST_SUBDIR}/afni.1 ${PREFIX}/man/man1
+ ${INSTALL_DATA} ${WRKDIR}/CA_EZ_v1.3c-May0806/* ${DATADIR}
+ ${INSTALL_MAN} ${WRKDIR}/afni.1 ${PREFIX}/man/man1
@${MV} ${INSTALL_TEMP}/* ${INSTALL_WRKSRC}
.if !defined(NOPORTDOCS)
${MKDIR} ${DOCSDIR}
@@ -135,6 +139,6 @@ do-install:
.endif
post-install:
- @${CAT} ${WRKDIR}/pkg-message
+ @${CAT} pkg-message
.include <bsd.port.post.mk>