summaryrefslogtreecommitdiff
path: root/math
diff options
context:
space:
mode:
Diffstat (limited to '')
-rw-r--r--math/Makefile1
-rw-r--r--math/R-cran-mpoly/Makefile27
-rw-r--r--math/R-cran-mpoly/distinfo3
-rw-r--r--math/R-cran-mpoly/pkg-descr2
-rw-r--r--math/flint/Makefile6
-rw-r--r--math/flint/distinfo6
-rw-r--r--math/flint/pkg-plist4
-rw-r--r--math/geogebra/Makefile2
-rw-r--r--math/geogebra/distinfo6
-rw-r--r--math/labplot/Makefile2
-rw-r--r--math/mdal/Makefile3
-rw-r--r--math/mdal/distinfo6
-rw-r--r--math/octave-forge-control/Makefile2
-rw-r--r--math/octave-forge-control/distinfo6
-rw-r--r--math/octave-forge-symbolic/Makefile3
-rw-r--r--math/octave-forge-symbolic/distinfo6
-rw-r--r--math/p5-Math-MPFR/Makefile2
-rw-r--r--math/p5-Math-MPFR/distinfo6
-rw-r--r--math/p5-Math-Polygon/Makefile7
-rw-r--r--math/p5-Math-Polygon/distinfo6
-rw-r--r--math/py-networkx/Makefile4
-rw-r--r--math/py-numpy/Makefile48
22 files changed, 102 insertions, 56 deletions
diff --git a/math/Makefile b/math/Makefile
index e94469b8deaa..33cd64aa1d88 100644
--- a/math/Makefile
+++ b/math/Makefile
@@ -104,6 +104,7 @@
SUBDIR += R-cran-mitools
SUBDIR += R-cran-mnormt
SUBDIR += R-cran-moments
+ SUBDIR += R-cran-mpoly
SUBDIR += R-cran-mvtnorm
SUBDIR += R-cran-ncdf4
SUBDIR += R-cran-nloptr
diff --git a/math/R-cran-mpoly/Makefile b/math/R-cran-mpoly/Makefile
new file mode 100644
index 000000000000..93cfd3daa088
--- /dev/null
+++ b/math/R-cran-mpoly/Makefile
@@ -0,0 +1,27 @@
+PORTNAME= mpoly
+DISTVERSION= 1.1.2
+CATEGORIES= math
+DISTNAME= ${PORTNAME}_${PORTVERSION}
+
+MAINTAINER= uzsolt@FreeBSD.org
+COMMENT= Symbolic computing with multivariate polynomials in R
+WWW= https://cran.r-project.org/package=${PORTNAME}
+
+LICENSE= GPLv2
+
+RUN_DEPENDS= R-cran-ggplot2>0:graphics/R-cran-ggplot2 \
+ R-cran-orthopolynom>0:math/R-cran-orthopolynom \
+ R-cran-partitions>0:math/R-cran-partitions \
+ R-cran-plyr>0:devel/R-cran-plyr \
+ R-cran-polynom>0:math/R-cran-polynom \
+ R-cran-stringi>0:textproc/R-cran-stringi \
+ R-cran-stringr>=1.0.0:textproc/R-cran-stringr \
+ R-cran-tidyr>0:devel/R-cran-tidyr
+TEST_DEPENDS= R-cran-covr>0:devel/R-cran-covr \
+ R-cran-dplyr>0:math/R-cran-dplyr \
+ R-cran-magrittr>0:devel/R-cran-magrittr \
+ R-cran-testthat>=2.1.0:devel/R-cran-testthat
+
+USES= cran:auto-plist
+
+.include <bsd.port.mk>
diff --git a/math/R-cran-mpoly/distinfo b/math/R-cran-mpoly/distinfo
new file mode 100644
index 000000000000..cfeb68b37bf4
--- /dev/null
+++ b/math/R-cran-mpoly/distinfo
@@ -0,0 +1,3 @@
+TIMESTAMP = 1757064223
+SHA256 (mpoly_1.1.2.tar.gz) = dbef5aff839d567c5a7e697dfb70f116832501aec79364779caf827796b50cca
+SIZE (mpoly_1.1.2.tar.gz) = 1879213
diff --git a/math/R-cran-mpoly/pkg-descr b/math/R-cran-mpoly/pkg-descr
new file mode 100644
index 000000000000..995e57e4d0e3
--- /dev/null
+++ b/math/R-cran-mpoly/pkg-descr
@@ -0,0 +1,2 @@
+mpoly is a simple collection of tools to help deal with multivariate polynomials
+symbolically and functionally in R.
diff --git a/math/flint/Makefile b/math/flint/Makefile
index 652cd8119eca..06888de4f74e 100644
--- a/math/flint/Makefile
+++ b/math/flint/Makefile
@@ -1,5 +1,5 @@
PORTNAME= flint
-DISTVERSION= 3.2.0
+DISTVERSION= 3.3.1
CATEGORIES= math
MASTER_SITES= http://www.flintlib.org/download/
@@ -45,8 +45,8 @@ MAKE_ENV+= VERBOSE=1
MAKE_ARGS+= VERBOSE=1
post-install:
- @${STRIP_CMD} ${STAGEDIR}${PREFIX}/lib/libflint.so.20.0.0
+ @${STRIP_CMD} ${STAGEDIR}${PREFIX}/lib/libflint.so.21.0.0
-# tests as of 3.2.0: All tests passed.
+# tests as of 3.3.1: All tests passed.
.include <bsd.port.mk>
diff --git a/math/flint/distinfo b/math/flint/distinfo
index 91a90dc16a1a..73745c05e495 100644
--- a/math/flint/distinfo
+++ b/math/flint/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1741882945
-SHA256 (flint-3.2.0.tar.gz) = 6d182c4a05d3d6bfc611565d6331d02f94066a3be32df36ed880264afa9c30f4
-SIZE (flint-3.2.0.tar.gz) = 8384561
+TIMESTAMP = 1757637266
+SHA256 (flint-3.3.1.tar.gz) = 64d70e513076cfa971e0410b58c1da5d35112913e9a56b44e2c681b459d3eafb
+SIZE (flint-3.3.1.tar.gz) = 8400253
diff --git a/math/flint/pkg-plist b/math/flint/pkg-plist
index b293f9f6d6b5..54ce9b9d01cb 100644
--- a/math/flint/pkg-plist
+++ b/math/flint/pkg-plist
@@ -174,6 +174,6 @@ include/flint/thread_pool.h
include/flint/thread_support.h
include/flint/ulong_extras.h
lib/libflint.so
-lib/libflint.so.20
-lib/libflint.so.20.0.0
+lib/libflint.so.21
+lib/libflint.so.21.0.0
libdata/pkgconfig/flint.pc
diff --git a/math/geogebra/Makefile b/math/geogebra/Makefile
index ed04d03890c1..8d4a8db5b136 100644
--- a/math/geogebra/Makefile
+++ b/math/geogebra/Makefile
@@ -1,5 +1,5 @@
PORTNAME= geogebra
-DISTVERSION= 5-2-898-1
+DISTVERSION= 5-2-899-0
CATEGORIES= math education java
MASTER_SITES= http://download.geogebra.org/installers/5.2/ \
https://static.geogebra.org/images/ \
diff --git a/math/geogebra/distinfo b/math/geogebra/distinfo
index b7ba6f3a36d3..84a9e4d8c457 100644
--- a/math/geogebra/distinfo
+++ b/math/geogebra/distinfo
@@ -1,6 +1,6 @@
-TIMESTAMP = 1756283344
-SHA256 (GeoGebra-Linux-Portable-5-2-898-1.tar.bz2) = 43bc1442b2ad8ef346932383fc4bc5166f2928a18c70bc453f1092fc62135fca
-SIZE (GeoGebra-Linux-Portable-5-2-898-1.tar.bz2) = 62967973
+TIMESTAMP = 1757477906
+SHA256 (GeoGebra-Linux-Portable-5-2-899-0.tar.bz2) = dda3e8075e66990418a5913e38bbdd72a8bf32a2805f1886aa1d13aaad95b264
+SIZE (GeoGebra-Linux-Portable-5-2-899-0.tar.bz2) = 62954321
SHA256 (geogebra.png) = e97122d77209e2c235f5afcee8f783c1e933d14062851ac73a4ed7a6520c5614
SIZE (geogebra.png) = 4018
SHA256 (geogebra-logo.svg) = 55ded6b5ec9ad382494f858d8ab5def0ed6c7d529481cd212863b2edde3b5e07
diff --git a/math/labplot/Makefile b/math/labplot/Makefile
index 2ccd56f65050..a2ff6b0f5b21 100644
--- a/math/labplot/Makefile
+++ b/math/labplot/Makefile
@@ -32,6 +32,8 @@ USE_XORG= x11 xcb
KDE_INVENT= 110f258e44a45354c5219e497409a22185fa2933 education labplot
+CXXFLAGS+= -Wno-error=undef
+
PLIST_SUB= SHLIB_VER=${PORTVERSION}
OPTIONS_DEFINE= CANTOR FITS FFTW3 HDF5 LIBCERF MATLAB NETCDF ORCUS \
diff --git a/math/mdal/Makefile b/math/mdal/Makefile
index 1ef54c326153..a2d5099e06fc 100644
--- a/math/mdal/Makefile
+++ b/math/mdal/Makefile
@@ -1,7 +1,6 @@
PORTNAME= mdal
DISTVERSIONPREFIX= release-
-DISTVERSION= 1.2.0
-PORTREVISION= 5
+DISTVERSION= 1.3.1
CATEGORIES= math geography
MAINTAINER= wen@FreeBSD.org
diff --git a/math/mdal/distinfo b/math/mdal/distinfo
index 68030c466242..ac54efbc281d 100644
--- a/math/mdal/distinfo
+++ b/math/mdal/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1716859101
-SHA256 (lutraconsulting-MDAL-release-1.2.0_GH0.tar.gz) = d97ac5543daf25c388dee770d0b14d6462e5e596b502b5314018c056aeea7919
-SIZE (lutraconsulting-MDAL-release-1.2.0_GH0.tar.gz) = 88009275
+TIMESTAMP = 1757039653
+SHA256 (lutraconsulting-MDAL-release-1.3.1_GH0.tar.gz) = 86431efe97680201583ba0491ecd110e2c50d006134cd02ff8b9630123cda998
+SIZE (lutraconsulting-MDAL-release-1.3.1_GH0.tar.gz) = 88023474
diff --git a/math/octave-forge-control/Makefile b/math/octave-forge-control/Makefile
index 8d1a16e54c2f..d563854aa7da 100644
--- a/math/octave-forge-control/Makefile
+++ b/math/octave-forge-control/Makefile
@@ -1,6 +1,6 @@
PORTNAME= octave-forge-control
DISTVERSIONPREFIX= control-
-DISTVERSION= 4.1.2
+DISTVERSION= 4.1.3
CATEGORIES= math
MAINTAINER= stephen@FreeBSD.org
diff --git a/math/octave-forge-control/distinfo b/math/octave-forge-control/distinfo
index f72ac829cb38..feb811ec2d39 100644
--- a/math/octave-forge-control/distinfo
+++ b/math/octave-forge-control/distinfo
@@ -1,5 +1,5 @@
-TIMESTAMP = 1747609254
-SHA256 (octave-forge/gnu-octave-pkg-control-control-4.1.2_GH0.tar.gz) = ad4c25b749ff0ff6fa0e938ff96a1fa120c0daf411f8be590ac93af18fb70183
-SIZE (octave-forge/gnu-octave-pkg-control-control-4.1.2_GH0.tar.gz) = 352141
+TIMESTAMP = 1757703269
+SHA256 (octave-forge/gnu-octave-pkg-control-control-4.1.3_GH0.tar.gz) = aeef643cbaf3b83e4331cf22f6a0dd173198443df87a53b3bf27074c1f99aa7d
+SIZE (octave-forge/gnu-octave-pkg-control-control-4.1.3_GH0.tar.gz) = 358422
SHA256 (octave-forge/SLICOT-SLICOT-Reference-401037e_GH0.tar.gz) = bbdf70fe0a069ca80567f4421ba428ff9ea99b57f96ca552467032750f48b66f
SIZE (octave-forge/SLICOT-SLICOT-Reference-401037e_GH0.tar.gz) = 2868815
diff --git a/math/octave-forge-symbolic/Makefile b/math/octave-forge-symbolic/Makefile
index 022a622905a1..481b532332c3 100644
--- a/math/octave-forge-symbolic/Makefile
+++ b/math/octave-forge-symbolic/Makefile
@@ -1,6 +1,5 @@
PORTNAME= octave-forge-symbolic
-PORTVERSION= 3.2.1
-PORTREVISION= 1
+PORTVERSION= 3.2.2
CATEGORIES= math
MASTER_SITES= SF/octave/Octave%20Forge%20Packages/Individual%20Package%20Releases
DISTNAME= ${OCTAVE_PKGNAME}-${DISTVERSIONFULL}
diff --git a/math/octave-forge-symbolic/distinfo b/math/octave-forge-symbolic/distinfo
index 09a305e78e4b..440056caea6f 100644
--- a/math/octave-forge-symbolic/distinfo
+++ b/math/octave-forge-symbolic/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1715801086
-SHA256 (octave-forge/symbolic-3.2.1.tar.gz) = d1a6ef4d12c48fc4412ceec380f398a6cd5180e518c131ba12683e9eb8f75460
-SIZE (octave-forge/symbolic-3.2.1.tar.gz) = 273021
+TIMESTAMP = 1757703320
+SHA256 (octave-forge/symbolic-3.2.2.tar.gz) = 8eb492408ec5aafe4e196ec5bdbd2298e0ac068d2b754948f34b9082b9126b37
+SIZE (octave-forge/symbolic-3.2.2.tar.gz) = 276452
diff --git a/math/p5-Math-MPFR/Makefile b/math/p5-Math-MPFR/Makefile
index b44a9d11c69b..99042f1e3b7e 100644
--- a/math/p5-Math-MPFR/Makefile
+++ b/math/p5-Math-MPFR/Makefile
@@ -1,5 +1,5 @@
PORTNAME= Math-MPFR
-PORTVERSION= 4.43
+PORTVERSION= 4.44
CATEGORIES= math perl5
MASTER_SITES= CPAN
PKGNAMEPREFIX= p5-
diff --git a/math/p5-Math-MPFR/distinfo b/math/p5-Math-MPFR/distinfo
index 46c83f4f7f69..df626cc9bac1 100644
--- a/math/p5-Math-MPFR/distinfo
+++ b/math/p5-Math-MPFR/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1752262705
-SHA256 (Math-MPFR-4.43.tar.gz) = cfa3d6c15c0a7f991927f7e6046543343798351724f9d13868751dbdb476ee89
-SIZE (Math-MPFR-4.43.tar.gz) = 243205
+TIMESTAMP = 1757518741
+SHA256 (Math-MPFR-4.44.tar.gz) = f6b829b46d1eef1acaa6e4004c5817eab5fe4b22bb79532b060035e82eccc354
+SIZE (Math-MPFR-4.44.tar.gz) = 248292
diff --git a/math/p5-Math-Polygon/Makefile b/math/p5-Math-Polygon/Makefile
index ec3053923bec..fdc8352ff1c4 100644
--- a/math/p5-Math-Polygon/Makefile
+++ b/math/p5-Math-Polygon/Makefile
@@ -1,5 +1,5 @@
PORTNAME= Math-Polygon
-PORTVERSION= 1.11
+PORTVERSION= 2.00
CATEGORIES= math perl5
MASTER_SITES= CPAN
PKGNAMEPREFIX= p5-
@@ -11,8 +11,11 @@ WWW= https://metacpan.org/release/Math-Polygon
LICENSE= ART10 GPLv1+
LICENSE_COMB= dual
-NO_ARCH= yes
+TEST_DEPENDS= p5-Log-Report>0:devel/p5-Log-Report
+
USES= perl5
USE_PERL5= configure
+NO_ARCH= yes
+
.include <bsd.port.mk>
diff --git a/math/p5-Math-Polygon/distinfo b/math/p5-Math-Polygon/distinfo
index 07c9bc25b96d..07fd36e57941 100644
--- a/math/p5-Math-Polygon/distinfo
+++ b/math/p5-Math-Polygon/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1746329043
-SHA256 (Math-Polygon-1.11.tar.gz) = 14c117db44d42e09de60fd1918322d83bfb4b5474d1d767cf70c80fe78efa2d8
-SIZE (Math-Polygon-1.11.tar.gz) = 27063
+TIMESTAMP = 1757519272
+SHA256 (Math-Polygon-2.00.tar.gz) = 6c403bad7c0a61b4d7c86736aaeb76789ae432fa7a864c147e160f3d552afa53
+SIZE (Math-Polygon-2.00.tar.gz) = 28973
diff --git a/math/py-networkx/Makefile b/math/py-networkx/Makefile
index 5f76f6f76119..368f5c22ae7b 100644
--- a/math/py-networkx/Makefile
+++ b/math/py-networkx/Makefile
@@ -1,6 +1,6 @@
PORTNAME= networkx
DISTVERSION= 3.5
-PORTREVISION= 2
+PORTREVISION= 3
PORTEPOCH= 2
CATEGORIES= math python
MASTER_SITES= PYPI
@@ -48,7 +48,7 @@ GRAPHVIZ_DESC= Additional graph layout and rendering algorithms
GRAPHVIZ_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pygraphviz>=1.2:graphics/py-pygraphviz@${PY_FLAVOR}
LXML_DESC= Binding for the libxml2 and libxslt libraries
-LXML_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}lxml5>=0:devel/py-lxml5@${PY_FLAVOR}
+LXML_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}lxml>=0:devel/py-lxml@${PY_FLAVOR}
PANDAS_DESC= Data analysis
PANDAS_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pandas>=1.3:math/py-pandas@${PY_FLAVOR}
diff --git a/math/py-numpy/Makefile b/math/py-numpy/Makefile
index 9e95667d2031..0c9257ff3e9c 100644
--- a/math/py-numpy/Makefile
+++ b/math/py-numpy/Makefile
@@ -18,47 +18,54 @@ WWW= https://www.numpy.org/
LICENSE= BSD3CLAUSE
LICENSE_FILE= ${WRKSRC}/LICENSE.txt
-TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pytest>=6.2.5:devel/py-pytest@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}hypothesis>=6.24.1:devel/py-hypothesis@${PY_FLAVOR} \
+TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}hypothesis>=6.24.1:devel/py-hypothesis@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}pytest>=6.2.5:devel/py-pytest@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}typing-extensions>=4.2.0:devel/py-typing-extensions@${PY_FLAVOR}
USES= compiler:c11 cpe fortran python:3.9+
USE_PYTHON= allflavors autoplist concurrent cython distutils
-GCCLIBDIR_CMDS= ${FC} -print-file-name=libgfortran.so | ${SED} -e s/libgfortran.so//
-LDFLAGS+= -s
-PYDISTUTILS_BUILDARGS= --fcompiler=gnu95
+GCCLIBDIR_CMDS= ${FC} -print-file-name=libgfortran.so | ${SED} -e \
+ s/libgfortran.so//
PYDISTUTILS_CONFIGUREARGS= --fcompiler=gnu95
+PYDISTUTILS_BUILDARGS= --fcompiler=gnu95
+LDFLAGS+= -s
PIE_UNSAFE= yes
-PORTDOCS= *
-
PORTSCOUT= limit:^1\.
+PORTDOCS= *
+
OPTIONS_DEFINE= DOCS SUITESPARSE
+OPTIONS_DEFAULT= OPENBLAS SUITESPARSE
OPTIONS_SINGLE= BLASLIB
OPTIONS_SINGLE_BLASLIB= ATLAS NETLIB OPENBLAS
-OPTIONS_DEFAULT= OPENBLAS SUITESPARSE
SUITESPARSE_DESC= Use AMD and UMFPACK in SuiteSparse
-ATLAS_USES= blaslapack:atlas
-ATLAS_VARS= BLASLIBS="ptf77blas, ptcblas" BLASNAME=atlas LAPACKLIBS=alapack LIBRARIES=atlas_libs
-NETLIB_LIB_DEPENDS= libcblas.so:math/cblas
-NETLIB_USES= blaslapack:netlib
-NETLIB_VARS= BLASLIBS="blas, cblas" BLASNAME=atlas LAPACKLIBS=lapack LIBRARIES=atlas_libs
-OPENBLAS_USES= blaslapack:openblas
-OPENBLAS_VARS= BLASLIBS="openblas, gfortran" BLASNAME=openblas LAPACKLIBS="openblas, gfortran" LIBRARIES=libraries
-SUITESPARSE_LIB_DEPENDS=libumfpack.so:math/suitesparse-umfpack
+ATLAS_USES= blaslapack:atlas
+ATLAS_VARS= BLASLIBS="ptf77blas, ptcblas" \
+ BLASNAME=atlas \
+ LAPACKLIBS=alapack \
+ LIBRARIES=atlas_libs
+NETLIB_LIB_DEPENDS= libcblas.so:math/cblas
+NETLIB_USES= blaslapack:netlib
+NETLIB_VARS= BLASLIBS="blas, cblas" \
+ BLASNAME=atlas \
+ LAPACKLIBS=lapack \
+ LIBRARIES=atlas_libs
+OPENBLAS_USES= blaslapack:openblas
+OPENBLAS_VARS= BLASLIBS="openblas, gfortran" \
+ BLASNAME=openblas \
+ LAPACKLIBS="openblas, gfortran" \
+ LIBRARIES=libraries
+SUITESPARSE_LIB_DEPENDS= libumfpack.so:math/suitesparse-umfpack
post-extract:
@${TOUCH} ${WRKSRC}/numpy/f2py/tests/src/temp
@${TOUCH} ${WRKSRC}/numpy/random/_examples/temp
@${TOUCH} ${WRKSRC}/numpy/core/tests/examples/temp
-pre-configure-SUITESPARSE-off:
- @${REINPLACE_CMD} -e 's|:%%LOCALBASE%%/include/suitesparse||' ${WRKSRC}/site.cfg
-
pre-configure:
@${REINPLACE_CMD} -e 's|%%FC%%|${FC}|' ${WRKSRC}/numpy/distutils/fcompiler/gnu.py
@${CP} ${FILESDIR}/site.cfg ${WRKSRC}/site.cfg
@@ -68,6 +75,9 @@ pre-configure:
${WRKSRC}/site.cfg
@${REINPLACE_CMD} -e "s|%%GCCLIBDIR%%|$$(${GCCLIBDIR_CMDS})|" ${WRKSRC}/site.cfg ${WRKSRC}/numpy/distutils/system_info.py
+pre-configure-SUITESPARSE-off:
+ @${REINPLACE_CMD} -e 's|:%%LOCALBASE%%/include/suitesparse||' ${WRKSRC}/site.cfg
+
do-configure:
post-install:
generated by cgit v1.2.3 (git 2.25.1) at 2025-09-13 05:57:13 +0000