diff options
Diffstat (limited to 'biology/nab/Makefile')
| -rw-r--r-- | biology/nab/Makefile | 56 |
1 files changed, 36 insertions, 20 deletions
diff --git a/biology/nab/Makefile b/biology/nab/Makefile index 592421cc793b..bce5da6ac325 100644 --- a/biology/nab/Makefile +++ b/biology/nab/Makefile @@ -4,48 +4,64 @@ # $FreeBSD$ PORTNAME= nab -PORTVERSION= 4.2 +PORTVERSION= 4.3.2 CATEGORIES= biology MASTER_SITES= ftp://ftp.scripps.edu/pub/case/ MAINTAINER= bdodson@scms.utmb.edu -NO_WRKSUBDIR= yes -MAKE_ENV+= WRKSRC=${WRKSRC} PREFIX=${PREFIX} \ - NABHOME=${PREFIX}/share/nab ARCH= \ - INSTALL_MAN="${INSTALL_MAN}" +MAKE_ENV+= NABHOME=${WRKSRC} ARCH= PATH=${WRKSRC}/bin:${PATH} + MAN1= nab.1 MANCOMPRESSED= yes +BINARIES= matextract matmul teLeap tss_main \ + matgen nab transform tss_next \ + matmerge nab2c tss_init ucpp + +LIBRARIES= cifparse.a libnab.a libsym.a + +INCS= defreal.h nab.h nabcode.h nabtypes.h + post-extract: - @${CP} ${FILESDIR}/Makefile ${WRKSRC} - @${CP} ${FILESDIR}/Makefile.doc ${WRKSRC}/doc/Makefile @${CP} ${FILESDIR}/config.h ${WRKSRC} pre-install: + @cd ${WRKSRC}/src && \ + ${SETENV} PREFIX=${PREFIX} ${MAKE} beforerealinstall + +do-install: @-mkdir -p ${PREFIX}/share/nab -.if !defined(${NOPORTDOCS}) - @cd ${WRKSRC} && (tar cf - examples test | \ + @-mkdir -p ${PREFIX}/share/nab/bin + @-mkdir -p ${PREFIX}/share/nab/include + @-mkdir -p ${PREFIX}/share/nab/lib +.if !defined(NOPORTDOCS) + @cd ${WRKSRC} && (tar cf - examples test peptide suppose | \ (cd ${PREFIX}/share/nab; tar xf -)) @-mkdir -p ${PREFIX}/share/doc/nab ${INSTALL_MAN} ${WRKSRC}/doc/NAB.pdf ${PREFIX}/share/doc/nab .endif - @cd ${WRKSRC} && (tar cf - dgdb reslib | \ + @cd ${WRKSRC} && (tar cf - dgdb reslib fd_data | \ (cd ${PREFIX}/share/nab; tar xf -)) @(cd ${PREFIX}/share; ${CHOWN} -R ${SHAREOWN}.${SHAREGRP} nab; \ ${CHMOD} -R ugo+rX-w nab) - @-(cd ${PREFIX}/share/nab; ${RM} -f coords && ${LN} -s ../NDB coords) + @-(cd ${PREFIX}/share/nab && ${LN} -sf ../NDB coords) + ${INSTALL_PROGRAM} ${WRKSRC}/bin/* ${PREFIX}/bin + ${INSTALL_DATA} ${WRKSRC}/include/* ${PREFIX}/include + ${INSTALL_DATA} ${WRKSRC}/lib/* ${PREFIX}/lib + @-cd ${WRKSRC}/doc && ${GZIP_CMD} ${MAN1} + ${INSTALL_MAN} ${WRKSRC}/doc/nab.1.gz ${PREFIX}/man/man1 +.for f in ${BINARIES} + @cd ${PREFIX}/share/nab/bin && ${LN} -sf ../../../bin/${f} . +.endfor +.for f in ${LIBRARIES} + @cd ${PREFIX}/share/nab/lib && ${LN} -sf ../../../lib/${f} . +.endfor +.for f in ${INCS} + @cd ${PREFIX}/share/nab/include && ${LN} -sf ../../../include/${f} . +.endfor post-install: - @(cd ${PREFIX}/bin; \ - ${RM} -f nab && ${MV} ${PREFIX}/share/nab/bin/nab . ; \ - ${RM} -f nab2c && ${MV} ${PREFIX}/share/nab/bin/nab2c . ; \ - ${CHOWN} ${BINOWN}:${BINGRP} nab nab2c teLeap ; \ - strip nab nab2c teLeap ; \ - ${RMDIR} ${PREFIX}/share/nab/bin) @${CAT} ${PKGMESSAGE} -test: all - @cd ${WRKSRC}/src && make test - .include <bsd.port.mk> |