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authorcvs2svn <cvs2svn@FreeBSD.org>2011-02-11 03:06:02 +0000
committercvs2svn <cvs2svn@FreeBSD.org>2011-02-11 03:06:02 +0000
commitf259566108892351d3632c07a73d13c19134360f (patch)
treed8c04c2dd9d515238e6ff20e97948fc22f7f82be /science
parent- Update to 1.16.2 (diff)
This commit was manufactured by cvs2svn to create tag 'RELEASE_7_4_0'.release/7.4.0
Notes
Notes: svn path=/head/; revision=268906 svn path=/tags/RELEASE_7_4_0/; revision=268907; tag=release/7.4.0
Diffstat (limited to 'science')
-rw-r--r--science/pyvox/Makefile37
-rw-r--r--science/pyvox/distinfo3
-rw-r--r--science/pyvox/pkg-descr10
-rw-r--r--science/pyvox/pkg-plist25
-rw-r--r--science/ruby-netcdf/Makefile38
-rw-r--r--science/ruby-netcdf/distinfo3
-rw-r--r--science/ruby-netcdf/files/patch-extconf.rb12
-rw-r--r--science/ruby-netcdf/pkg-descr5
-rw-r--r--science/ruby-netcdf/pkg-plist21
9 files changed, 0 insertions, 154 deletions
diff --git a/science/pyvox/Makefile b/science/pyvox/Makefile
deleted file mode 100644
index c3aee72b9a3b..000000000000
--- a/science/pyvox/Makefile
+++ /dev/null
@@ -1,37 +0,0 @@
-# ex:ts=8
-# Ports collection Makefile for: bblimage
-# Date created: Jul 22, 2002
-# Whom: ijliao
-#
-# $FreeBSD$
-#
-
-PORTNAME= bblimage
-PORTVERSION= 0.66
-PORTREVISION= 3
-CATEGORIES= science
-MASTER_SITES= ${MASTER_SITE_LOCAL}
-MASTER_SITE_SUBDIR= miwi
-EXTRACT_SUFX= .src.tgz
-
-MAINTAINER= ports@FreeBSD.org
-COMMENT= A set of software tools for medical image processing
-
-LIB_DEPENDS= Xm.2:${PORTSDIR}/x11-toolkits/lesstif
-
-USE_XORG= x11
-USE_PYTHON= yes
-GNU_CONFIGURE= yes
-CONFIGURE_ARGS= --with-lapack --with-python
-USE_GMAKE= yes
-USE_LDCONFIG= yes
-
-MAN1= anonbblanz.1 bblimage.1 binnseg.1 conseg.1 decomment.1 dumpbblanz.1 \
- imstack.1 inleav2.1 lovar.1 qdv.1 rpsamp.1 skmiv.1 swab.1 usb2uc.1 \
- vibihist.1 vihist.1
-MAN5= cdata.5 mri_data.5 param.5
-
-post-patch:
- @${REINPLACE_CMD} -e "s|python1\.5|${PYTHON_VERSION}|g" ${WRKSRC}/configure ${WRKSRC}/Makefile.in
-
-.include <bsd.port.mk>
diff --git a/science/pyvox/distinfo b/science/pyvox/distinfo
deleted file mode 100644
index 7da85ab0f456..000000000000
--- a/science/pyvox/distinfo
+++ /dev/null
@@ -1,3 +0,0 @@
-MD5 (bblimage-0.66.src.tgz) = 9b01e8128c4009984300453ee00d601c
-SHA256 (bblimage-0.66.src.tgz) = d645cda214076dc9977b7ed099f3643b19fe5552eab4a2ea9ddae6cec5d37f11
-SIZE (bblimage-0.66.src.tgz) = 967079
diff --git a/science/pyvox/pkg-descr b/science/pyvox/pkg-descr
deleted file mode 100644
index 9753cc4f0d55..000000000000
--- a/science/pyvox/pkg-descr
+++ /dev/null
@@ -1,10 +0,0 @@
-BBLimage is a set of software tools for medical image processing, particularly
-skull stripping and segmentation of MR brain images; tools to support other
-applications may be added later. These tools are intended to support
-researchers who need to prototype new image analysis algorithms or to develop
-automated image analysis tools for specific image analysis applications. The
-sequence of processing operations is specified through a scripting language
-which can be used interactively or in command files; the language used is an
-extension of Python.
-
-WWW: http://www.uphs.upenn.edu/bbl/software/bblimage/
diff --git a/science/pyvox/pkg-plist b/science/pyvox/pkg-plist
deleted file mode 100644
index 114ca046c741..000000000000
--- a/science/pyvox/pkg-plist
+++ /dev/null
@@ -1,25 +0,0 @@
-bin/anonbblanz
-bin/binnseg
-bin/conseg
-bin/decomment
-bin/dumpbblanz
-bin/imstack
-bin/inleav2
-bin/lovar
-bin/qdv
-bin/rowcol
-bin/rpsamp
-bin/skmiv
-bin/swab
-bin/usb2uc
-bin/vibihist
-bin/vihist
-lib/libbbli.so
-%%PYTHON_SITELIBDIR%%/exim.so
-%%PYTHON_SITELIBDIR%%/optim.py
-%%PYTHON_SITELIBDIR%%/optim.pyc
-%%PYTHON_SITELIBDIR%%/pyvox.py
-%%PYTHON_SITELIBDIR%%/pyvox.pyc
-%%PYTHON_SITELIBDIR%%/pyvoxC.so
-%%PYTHON_SITELIBDIR%%/regis.py
-%%PYTHON_SITELIBDIR%%/regis.pyc
diff --git a/science/ruby-netcdf/Makefile b/science/ruby-netcdf/Makefile
deleted file mode 100644
index a165ca77c9e7..000000000000
--- a/science/ruby-netcdf/Makefile
+++ /dev/null
@@ -1,38 +0,0 @@
-# New ports collection makefile for: RubyNetCDF
-# Date created: 11 June 2002
-# Whom: Akinori MUSHA aka knu <knu@idaemons.org>
-#
-# $FreeBSD$
-#
-
-PORTNAME= netcdf
-PORTVERSION= 0.6.4
-CATEGORIES= math ruby
-MASTER_SITES= http://ruby.gfd-dennou.org/products/ruby-netcdf/
-PKGNAMEPREFIX= ${RUBY_PKGNAMEPREFIX}
-DISTNAME= ruby-${PORTNAME}-${PORTVERSION}
-DIST_SUBDIR= ruby
-
-MAINTAINER= ruby@FreeBSD.org
-COMMENT= A Ruby interface to the NetCDF scientific IO library
-
-BUILD_DEPENDS= ${RUBY_SITEARCHLIBDIR}/narray.so:${PORTSDIR}/math/ruby-narray
-LIB_DEPENDS= netcdf.4:${PORTSDIR}/science/netcdf
-RUN_DEPENDS= ${RUBY_SITEARCHLIBDIR}/narray.so:${PORTSDIR}/math/ruby-narray
-
-USE_RUBY= yes
-USE_RUBY_EXTCONF= yes
-
-DOCS= ChangeLog ToDo doc/*
-
-post-install:
-.if !defined(NOPORTDOCS)
- ${MKDIR} ${RUBY_MODEXAMPLESDIR}
- ${INSTALL_DATA} ${WRKSRC}/demo/* ${RUBY_MODEXAMPLESDIR}/
- ${MKDIR} ${RUBY_MODDOCDIR}
-.for f in ${DOCS}
- ${INSTALL_DATA} ${WRKSRC}/${f} ${RUBY_MODDOCDIR}/
-.endfor
-.endif
-
-.include <bsd.port.mk>
diff --git a/science/ruby-netcdf/distinfo b/science/ruby-netcdf/distinfo
deleted file mode 100644
index 0dde1aaf6307..000000000000
--- a/science/ruby-netcdf/distinfo
+++ /dev/null
@@ -1,3 +0,0 @@
-MD5 (ruby/ruby-netcdf-0.6.4.tar.gz) = bbdeee98da256ab027515d6ac894bbcf
-SHA256 (ruby/ruby-netcdf-0.6.4.tar.gz) = 2f9a22f54fe99132a259a735d1052b3b82fb7219af060ad20d76a22d1b68aa88
-SIZE (ruby/ruby-netcdf-0.6.4.tar.gz) = 74369
diff --git a/science/ruby-netcdf/files/patch-extconf.rb b/science/ruby-netcdf/files/patch-extconf.rb
deleted file mode 100644
index d0708cf8702a..000000000000
--- a/science/ruby-netcdf/files/patch-extconf.rb
+++ /dev/null
@@ -1,12 +0,0 @@
---- extconf.rb.orig Thu Jun 23 09:20:15 2005
-+++ extconf.rb Tue Jan 17 13:36:39 2006
-@@ -105,9 +105,6 @@
- newmkfl.puts("")
- newmkfl.puts("test: all") # insert the "test" target
- newmkfl.puts("\t\t@cd test && ruby test.rb && echo 'test did not fail :-p (please ignore the warnings)' && cd ..")
-- when /lib\/netcdf/
-- line = line.chomp! + "/"
-- newmkfl.puts(line)
- else
- newmkfl.puts(line)
- end
diff --git a/science/ruby-netcdf/pkg-descr b/science/ruby-netcdf/pkg-descr
deleted file mode 100644
index f89d48a0bdc3..000000000000
--- a/science/ruby-netcdf/pkg-descr
+++ /dev/null
@@ -1,5 +0,0 @@
-This is a Ruby interface to the NetCDF scientific IO library.
-
-Author: Takeshi Horinouchi <horinout@kurasc.kyoto-u.ac.jp>
- & Dennou Ruby Project
-WWW: http://ruby.gfd-dennou.org/products/ruby-netcdf
diff --git a/science/ruby-netcdf/pkg-plist b/science/ruby-netcdf/pkg-plist
deleted file mode 100644
index 139c9f991a09..000000000000
--- a/science/ruby-netcdf/pkg-plist
+++ /dev/null
@@ -1,21 +0,0 @@
-%%RUBY_SITEARCHLIBDIR%%/numru/netcdfraw.so
-@unexec rmdir %B 2>/dev/null || true
-%%RUBY_SITELIBDIR%%/numru/netcdf.rb
-%%RUBY_SITELIBDIR%%/numru/netcdf_miss.rb
-@unexec rmdir %B 2>/dev/null || true
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/README
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/demo1-create-alt.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/demo1-create.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/demo2-graphic.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/demo3-ncepclim.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/demo4-copy.rb
-%%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%
-%%PORTDOCS%%%%RUBY_MODDOCDIR%%/ChangeLog
-%%PORTDOCS%%%%RUBY_MODDOCDIR%%/ToDo
-%%PORTDOCS%%%%RUBY_MODDOCDIR%%/README_JP.txt
-%%PORTDOCS%%%%RUBY_MODDOCDIR%%/Ref_man.html
-%%PORTDOCS%%%%RUBY_MODDOCDIR%%/Ref_man.rd
-%%PORTDOCS%%%%RUBY_MODDOCDIR%%/Ref_man_jp.html
-%%PORTDOCS%%%%RUBY_MODDOCDIR%%/Ref_man_jp.rd
-%%PORTDOCS%%%%RUBY_MODDOCDIR%%/to_html
-%%PORTDOCS%%@dirrm %%RUBY_MODDOCDIR%%