diff options
| author | Andrej Zverev <az@FreeBSD.org> | 2012-06-28 17:51:57 +0000 |
|---|---|---|
| committer | Andrej Zverev <az@FreeBSD.org> | 2012-06-28 17:51:57 +0000 |
| commit | fb486fa9815f6bcbfda1201bbf2a381d9610d992 (patch) | |
| tree | 8743beffc1add7432c438edd4235779c3c978a51 /science | |
| parent | - Fix two linux/dvb ioctls in multimedia/v4l_compat , multimedia/webcamd , (diff) | |
- Remove SITE_PERL from *_DEPENDS
Approved by: maintainer (via IRC)
Notes
Notes:
svn path=/head/; revision=300171
Diffstat (limited to 'science')
| -rw-r--r-- | science/p5-Chemistry-3DBuilder/Makefile | 24 | ||||
| -rw-r--r-- | science/p5-Chemistry-Bond-Find/Makefile | 4 | ||||
| -rw-r--r-- | science/p5-Chemistry-Canonicalize/Makefile | 4 | ||||
| -rw-r--r-- | science/p5-Chemistry-File-MDLMol/Makefile | 8 | ||||
| -rw-r--r-- | science/p5-Chemistry-File-Mopac/Makefile | 8 | ||||
| -rw-r--r-- | science/p5-Chemistry-File-SLN/Makefile | 20 | ||||
| -rw-r--r-- | science/p5-Chemistry-File-SMARTS/Makefile | 16 | ||||
| -rw-r--r-- | science/p5-Chemistry-File-SMILES/Makefile | 16 | ||||
| -rw-r--r-- | science/p5-Chemistry-File-VRML/Makefile | 4 | ||||
| -rw-r--r-- | science/p5-Chemistry-File-XYZ/Makefile | 4 | ||||
| -rw-r--r-- | science/p5-Chemistry-FormulaPattern/Makefile | 8 | ||||
| -rw-r--r-- | science/p5-Chemistry-InternalCoords/Makefile | 12 | ||||
| -rw-r--r-- | science/p5-Chemistry-MidasPattern/Makefile | 16 | ||||
| -rw-r--r-- | science/p5-Chemistry-Mok/Makefile | 16 | ||||
| -rw-r--r-- | science/p5-Chemistry-Pattern/Makefile | 4 | ||||
| -rw-r--r-- | science/p5-Chemistry-Reaction/Makefile | 16 | ||||
| -rw-r--r-- | science/p5-Chemistry-Ring/Makefile | 8 | ||||
| -rw-r--r-- | science/p5-PerlMol/Makefile | 92 |
18 files changed, 140 insertions, 140 deletions
diff --git a/science/p5-Chemistry-3DBuilder/Makefile b/science/p5-Chemistry-3DBuilder/Makefile index 1a64fa76f2ec..5442f4b14084 100644 --- a/science/p5-Chemistry-3DBuilder/Makefile +++ b/science/p5-Chemistry-3DBuilder/Makefile @@ -15,18 +15,18 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Generate 3D coordinates from a connection table -BUILD_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/File/SMILES.pm:${PORTSDIR}/science/p5-Chemistry-File-SMILES \ - ${SITE_PERL}/Chemistry/File/SMARTS.pm:${PORTSDIR}/science/p5-Chemistry-File-SMARTS \ - ${SITE_PERL}/Chemistry/Ring.pm:${PORTSDIR}/science/p5-Chemistry-Ring \ - ${SITE_PERL}/Chemistry/InternalCoords.pm:${PORTSDIR}/science/p5-Chemistry-InternalCoords \ - ${SITE_PERL}/Math/VectorReal.pm:${PORTSDIR}/math/p5-Math-VectorReal -RUN_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/File/SMILES.pm:${PORTSDIR}/science/p5-Chemistry-File-SMILES \ - ${SITE_PERL}/Chemistry/File/SMARTS.pm:${PORTSDIR}/science/p5-Chemistry-File-SMARTS \ - ${SITE_PERL}/Chemistry/Ring.pm:${PORTSDIR}/science/p5-Chemistry-Ring \ - ${SITE_PERL}/Chemistry/InternalCoords.pm:${PORTSDIR}/science/p5-Chemistry-InternalCoords \ - ${SITE_PERL}/Math/VectorReal.pm:${PORTSDIR}/math/p5-Math-VectorReal +BUILD_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-File-SMILES>=0:${PORTSDIR}/science/p5-Chemistry-File-SMILES \ + p5-Chemistry-File-SMARTS>=0:${PORTSDIR}/science/p5-Chemistry-File-SMARTS \ + p5-Chemistry-Ring>=0:${PORTSDIR}/science/p5-Chemistry-Ring \ + p5-Chemistry-InternalCoords>=0:${PORTSDIR}/science/p5-Chemistry-InternalCoords \ + p5-Math-VectorReal>=0:${PORTSDIR}/math/p5-Math-VectorReal +RUN_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-File-SMILES>=0:${PORTSDIR}/science/p5-Chemistry-File-SMILES \ + p5-Chemistry-File-SMARTS>=0:${PORTSDIR}/science/p5-Chemistry-File-SMARTS \ + p5-Chemistry-Ring>=0:${PORTSDIR}/science/p5-Chemistry-Ring \ + p5-Chemistry-InternalCoords>=0:${PORTSDIR}/science/p5-Chemistry-InternalCoords \ + p5-Math-VectorReal>=0:${PORTSDIR}/math/p5-Math-VectorReal PERL_CONFIGURE= yes diff --git a/science/p5-Chemistry-Bond-Find/Makefile b/science/p5-Chemistry-Bond-Find/Makefile index e8f7001e689d..920c97278719 100644 --- a/science/p5-Chemistry-Bond-Find/Makefile +++ b/science/p5-Chemistry-Bond-Find/Makefile @@ -15,8 +15,8 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Detect bonds in a molecule and assign formal bond orders -BUILD_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol -RUN_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol +BUILD_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol +RUN_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol MAN3= Chemistry::Bond::Find.3 diff --git a/science/p5-Chemistry-Canonicalize/Makefile b/science/p5-Chemistry-Canonicalize/Makefile index 878c20315bde..5165e04733a4 100644 --- a/science/p5-Chemistry-Canonicalize/Makefile +++ b/science/p5-Chemistry-Canonicalize/Makefile @@ -15,8 +15,8 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Number the atoms in a molecule in a unique way -BUILD_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol -RUN_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol +BUILD_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol +RUN_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol MAN3= Chemistry::Canonicalize.3 diff --git a/science/p5-Chemistry-File-MDLMol/Makefile b/science/p5-Chemistry-File-MDLMol/Makefile index 7aab92ac89aa..263832e40c1c 100644 --- a/science/p5-Chemistry-File-MDLMol/Makefile +++ b/science/p5-Chemistry-File-MDLMol/Makefile @@ -15,10 +15,10 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= MDL molfile reader/write -BUILD_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/Ring/Find.pm:${PORTSDIR}/science/p5-Chemistry-Ring -RUN_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/Ring/Find.pm:${PORTSDIR}/science/p5-Chemistry-Ring +BUILD_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-Ring>=0:${PORTSDIR}/science/p5-Chemistry-Ring +RUN_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-Ring>=0:${PORTSDIR}/science/p5-Chemistry-Ring MAN3= Chemistry::File::MDLMol.3 Chemistry::File::SDF.3 diff --git a/science/p5-Chemistry-File-Mopac/Makefile b/science/p5-Chemistry-File-Mopac/Makefile index 1bec43115fc2..e9bfa6cce2d2 100644 --- a/science/p5-Chemistry-File-Mopac/Makefile +++ b/science/p5-Chemistry-File-Mopac/Makefile @@ -15,10 +15,10 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= MOPAC 6 input file reader/writer -BUILD_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/InternalCoords.pm:${PORTSDIR}/science/p5-Chemistry-InternalCoords -RUN_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/InternalCoords.pm:${PORTSDIR}/science/p5-Chemistry-InternalCoords +BUILD_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-InternalCoords>=0:${PORTSDIR}/science/p5-Chemistry-InternalCoords +RUN_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-InternalCoords>=0:${PORTSDIR}/science/p5-Chemistry-InternalCoords MAN3= Chemistry::File::Mopac.3 diff --git a/science/p5-Chemistry-File-SLN/Makefile b/science/p5-Chemistry-File-SLN/Makefile index 4b37f5cc9c24..86264056a93a 100644 --- a/science/p5-Chemistry-File-SLN/Makefile +++ b/science/p5-Chemistry-File-SLN/Makefile @@ -15,16 +15,16 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= SLN linear notation parser/writer -BUILD_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/Ring/Find.pm:${PORTSDIR}/science/p5-Chemistry-Ring \ - ${SITE_PERL}/Chemistry/Canonicalize.pm:${PORTSDIR}/science/p5-Chemistry-Canonicalize \ - ${SITE_PERL}/Chemistry/Bond/Find.pm:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ - ${SITE_PERL}/Parse/Yapp/Parse.pm:${PORTSDIR}/devel/p5-Parse-Yapp -RUN_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/Ring/Find.pm:${PORTSDIR}/science/p5-Chemistry-Ring \ - ${SITE_PERL}/Chemistry/Canonicalize.pm:${PORTSDIR}/science/p5-Chemistry-Canonicalize \ - ${SITE_PERL}/Chemistry/Bond/Find.pm:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ - ${SITE_PERL}/Parse/Yapp/Parse.pm:${PORTSDIR}/devel/p5-Parse-Yapp +BUILD_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-Ring>=0:${PORTSDIR}/science/p5-Chemistry-Ring \ + p5-Chemistry-Canonicalize>=0:${PORTSDIR}/science/p5-Chemistry-Canonicalize \ + p5-Chemistry-Bond-Find>=0:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ + p5-Parse-Yapp>=0:${PORTSDIR}/devel/p5-Parse-Yapp +RUN_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-Ring>=0:${PORTSDIR}/science/p5-Chemistry-Ring \ + p5-Chemistry-Canonicalize>=0:${PORTSDIR}/science/p5-Chemistry-Canonicalize \ + p5-Chemistry-Bond-Find>=0:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ + p5-Parse-Yapp>=0:${PORTSDIR}/devel/p5-Parse-Yapp MAN3= Chemistry::File::SLN.3 diff --git a/science/p5-Chemistry-File-SMARTS/Makefile b/science/p5-Chemistry-File-SMARTS/Makefile index 5f7f452dd518..b23fe9d6fb75 100644 --- a/science/p5-Chemistry-File-SMARTS/Makefile +++ b/science/p5-Chemistry-File-SMARTS/Makefile @@ -15,14 +15,14 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= SMARTS chemical substructure pattern linear notation parser -BUILD_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/Ring/Find.pm:${PORTSDIR}/science/p5-Chemistry-Ring \ - ${SITE_PERL}/Chemistry/Pattern.pm:${PORTSDIR}/science/p5-Chemistry-Pattern \ - ${SITE_PERL}/Chemistry/File/SMILES.pm:${PORTSDIR}/science/p5-Chemistry-File-SMILES -RUN_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/Ring/Find.pm:${PORTSDIR}/science/p5-Chemistry-Ring \ - ${SITE_PERL}/Chemistry/Pattern.pm:${PORTSDIR}/science/p5-Chemistry-Pattern \ - ${SITE_PERL}/Chemistry/File/SMILES.pm:${PORTSDIR}/science/p5-Chemistry-File-SMILES +BUILD_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-Ring>=0:${PORTSDIR}/science/p5-Chemistry-Ring \ + p5-Chemistry-Pattern>=0:${PORTSDIR}/science/p5-Chemistry-Pattern \ + p5-Chemistry-File-SMILES>=0:${PORTSDIR}/science/p5-Chemistry-File-SMILES +RUN_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-Ring>=0:${PORTSDIR}/science/p5-Chemistry-Ring \ + p5-Chemistry-Pattern>=0:${PORTSDIR}/science/p5-Chemistry-Pattern \ + p5-Chemistry-File-SMILES>=0:${PORTSDIR}/science/p5-Chemistry-File-SMILES MAN3= Chemistry::File::SMARTS.3 diff --git a/science/p5-Chemistry-File-SMILES/Makefile b/science/p5-Chemistry-File-SMILES/Makefile index 445605e87d35..6241b618f8f4 100644 --- a/science/p5-Chemistry-File-SMILES/Makefile +++ b/science/p5-Chemistry-File-SMILES/Makefile @@ -15,14 +15,14 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= SMILES linear notation parser/writer -BUILD_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/Bond/Find.pm:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ - ${SITE_PERL}/Chemistry/Canonicalize.pm:${PORTSDIR}/science/p5-Chemistry-Canonicalize \ - ${SITE_PERL}/Chemistry/Ring.pm:${PORTSDIR}/science/p5-Chemistry-Ring -RUN_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/Bond/Find.pm:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ - ${SITE_PERL}/Chemistry/Canonicalize.pm:${PORTSDIR}/science/p5-Chemistry-Canonicalize \ - ${SITE_PERL}/Chemistry/Ring.pm:${PORTSDIR}/science/p5-Chemistry-Ring +BUILD_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-Bond-Find>=0:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ + p5-Chemistry-Canonicalize>=0:${PORTSDIR}/science/p5-Chemistry-Canonicalize \ + p5-Chemistry-Ring>=0:${PORTSDIR}/science/p5-Chemistry-Ring +RUN_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-Bond-Find>=0:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ + p5-Chemistry-Canonicalize>=0:${PORTSDIR}/science/p5-Chemistry-Canonicalize \ + p5-Chemistry-Ring>=0:${PORTSDIR}/science/p5-Chemistry-Ring MAN3= Chemistry::File::SMILES.3 diff --git a/science/p5-Chemistry-File-VRML/Makefile b/science/p5-Chemistry-File-VRML/Makefile index 7f6a380e02c5..69a16b1693c3 100644 --- a/science/p5-Chemistry-File-VRML/Makefile +++ b/science/p5-Chemistry-File-VRML/Makefile @@ -15,8 +15,8 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Generate VRML models for molecules -BUILD_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol -RUN_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol +BUILD_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol +RUN_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol MAN3= Chemistry::File::VRML.3 diff --git a/science/p5-Chemistry-File-XYZ/Makefile b/science/p5-Chemistry-File-XYZ/Makefile index 7e114083d54d..5da0f4732fde 100644 --- a/science/p5-Chemistry-File-XYZ/Makefile +++ b/science/p5-Chemistry-File-XYZ/Makefile @@ -15,8 +15,8 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= XYZ molecule format reader/writer -BUILD_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol -RUN_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol +BUILD_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol +RUN_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol MAN3= Chemistry::File::XYZ.3 diff --git a/science/p5-Chemistry-FormulaPattern/Makefile b/science/p5-Chemistry-FormulaPattern/Makefile index 8adc555cc2cd..c63d35c40df0 100644 --- a/science/p5-Chemistry-FormulaPattern/Makefile +++ b/science/p5-Chemistry-FormulaPattern/Makefile @@ -15,10 +15,10 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Match molecule by formula -BUILD_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/Pattern.pm:${PORTSDIR}/science/p5-Chemistry-Pattern -RUN_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/Pattern.pm:${PORTSDIR}/science/p5-Chemistry-Pattern +BUILD_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-Pattern>=0:${PORTSDIR}/science/p5-Chemistry-Pattern +RUN_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-Pattern>=0:${PORTSDIR}/science/p5-Chemistry-Pattern MAN3= Chemistry::FormulaPattern.3 Chemistry::File::FormulaPattern.3 diff --git a/science/p5-Chemistry-InternalCoords/Makefile b/science/p5-Chemistry-InternalCoords/Makefile index 3b3dad21b818..e9687243181d 100644 --- a/science/p5-Chemistry-InternalCoords/Makefile +++ b/science/p5-Chemistry-InternalCoords/Makefile @@ -15,12 +15,12 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Represent the position of an atom using internal coordinates -BUILD_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/Bond/Find.pm:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ - ${SITE_PERL}/Chemistry/Canonicalize.pm:${PORTSDIR}/science/p5-Chemistry-Canonicalize -RUN_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/Bond/Find.pm:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ - ${SITE_PERL}/Chemistry/Canonicalize.pm:${PORTSDIR}/science/p5-Chemistry-Canonicalize +BUILD_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-Bond-Find>=0:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ + p5-Chemistry-Canonicalize>=0:${PORTSDIR}/science/p5-Chemistry-Canonicalize +RUN_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-Bond-Find>=0:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ + p5-Chemistry-Canonicalize>=0:${PORTSDIR}/science/p5-Chemistry-Canonicalize MAN3= Chemistry::InternalCoords.3 Chemistry::InternalCoords::Builder.3 diff --git a/science/p5-Chemistry-MidasPattern/Makefile b/science/p5-Chemistry-MidasPattern/Makefile index 2b9f6b8a12f5..bf768e2aba73 100644 --- a/science/p5-Chemistry-MidasPattern/Makefile +++ b/science/p5-Chemistry-MidasPattern/Makefile @@ -15,14 +15,14 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Select atoms in macromolecules -BUILD_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/File/PDB.pm:${PORTSDIR}/science/p5-Chemistry-File-PDB \ - ${SITE_PERL}/Chemistry/MacroMol.pm:${PORTSDIR}/science/p5-Chemistry-MacroMol \ - ${SITE_PERL}/Chemistry/Pattern.pm:${PORTSDIR}/science/p5-Chemistry-Pattern -RUN_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/File/PDB.pm:${PORTSDIR}/science/p5-Chemistry-File-PDB \ - ${SITE_PERL}/Chemistry/MacroMol.pm:${PORTSDIR}/science/p5-Chemistry-MacroMol \ - ${SITE_PERL}/Chemistry/Pattern.pm:${PORTSDIR}/science/p5-Chemistry-Pattern +BUILD_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-File-PDB>=0:${PORTSDIR}/science/p5-Chemistry-File-PDB \ + p5-Chemistry-MacroMol>=0:${PORTSDIR}/science/p5-Chemistry-MacroMol \ + p5-Chemistry-Pattern>=0:${PORTSDIR}/science/p5-Chemistry-Pattern +RUN_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-File-PDB>=0:${PORTSDIR}/science/p5-Chemistry-File-PDB \ + p5-Chemistry-MacroMol>=0:${PORTSDIR}/science/p5-Chemistry-MacroMol \ + p5-Chemistry-Pattern>=0:${PORTSDIR}/science/p5-Chemistry-Pattern MAN3= Chemistry::MidasPattern.3 Chemistry::File::MidasPattern.3 diff --git a/science/p5-Chemistry-Mok/Makefile b/science/p5-Chemistry-Mok/Makefile index 26a5a7b978fa..6e04d65a92bb 100644 --- a/science/p5-Chemistry-Mok/Makefile +++ b/science/p5-Chemistry-Mok/Makefile @@ -15,14 +15,14 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Molecular awk interpreter -BUILD_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/File/SMILES.pm:${PORTSDIR}/science/p5-Chemistry-File-SMILES \ - ${SITE_PERL}/Chemistry/Bond/Find.pm:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ - ${SITE_PERL}/Chemistry/Pattern.pm:${PORTSDIR}/science/p5-Chemistry-Pattern -RUN_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/File/SMILES.pm:${PORTSDIR}/science/p5-Chemistry-File-SMILES \ - ${SITE_PERL}/Chemistry/Bond/Find.pm:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ - ${SITE_PERL}/Chemistry/Pattern.pm:${PORTSDIR}/science/p5-Chemistry-Pattern +BUILD_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-File-SMILES>=0:${PORTSDIR}/science/p5-Chemistry-File-SMILES \ + p5-Chemistry-Bond-Find>=0:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ + p5-Chemistry-Pattern>=0:${PORTSDIR}/science/p5-Chemistry-Pattern +RUN_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-File-SMILES>=0:${PORTSDIR}/science/p5-Chemistry-File-SMILES \ + p5-Chemistry-Bond-Find>=0:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ + p5-Chemistry-Pattern>=0:${PORTSDIR}/science/p5-Chemistry-Pattern MAN1= mok.1 MAN3= Chemistry::Mok.3 diff --git a/science/p5-Chemistry-Pattern/Makefile b/science/p5-Chemistry-Pattern/Makefile index 5f544ee92a2a..55e851fc74ef 100644 --- a/science/p5-Chemistry-Pattern/Makefile +++ b/science/p5-Chemistry-Pattern/Makefile @@ -15,8 +15,8 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Chemical substructure pattern matching -BUILD_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol -RUN_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol +BUILD_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol +RUN_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol MAN3= Chemistry::Pattern.3 Chemistry::Pattern::Atom.3 Chemistry::Pattern::Bond.3 diff --git a/science/p5-Chemistry-Reaction/Makefile b/science/p5-Chemistry-Reaction/Makefile index a63a656af3d2..6e55a365c762 100644 --- a/science/p5-Chemistry-Reaction/Makefile +++ b/science/p5-Chemistry-Reaction/Makefile @@ -15,14 +15,14 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Represent a ring as a substructure of a molecule -BUILD_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/File/SMILES.pm:${PORTSDIR}/science/p5-Chemistry-File-SMILES \ - ${SITE_PERL}/Statistics/Regression.pm:${PORTSDIR}/math/p5-Statistics-Regression \ - ${SITE_PERL}/Chemistry/Pattern.pm:${PORTSDIR}/science/p5-Chemistry-Pattern -RUN_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/File/SMILES.pm:${PORTSDIR}/science/p5-Chemistry-File-SMILES \ - ${SITE_PERL}/Statistics/Regression.pm:${PORTSDIR}/math/p5-Statistics-Regression \ - ${SITE_PERL}/Chemistry/Pattern.pm:${PORTSDIR}/science/p5-Chemistry-Pattern +BUILD_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-File-SMILES>=0:${PORTSDIR}/science/p5-Chemistry-File-SMILES \ + p5-Statistics-Regression>=0:${PORTSDIR}/math/p5-Statistics-Regression \ + p5-Chemistry-Pattern>=0:${PORTSDIR}/science/p5-Chemistry-Pattern +RUN_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-File-SMILES>=0:${PORTSDIR}/science/p5-Chemistry-File-SMILES \ + p5-Statistics-Regression>=0:${PORTSDIR}/math/p5-Statistics-Regression \ + p5-Chemistry-Pattern>=0:${PORTSDIR}/science/p5-Chemistry-Pattern MAN3= Chemistry::Reaction.3 diff --git a/science/p5-Chemistry-Ring/Makefile b/science/p5-Chemistry-Ring/Makefile index d51da95ce19d..f8b5d735996c 100644 --- a/science/p5-Chemistry-Ring/Makefile +++ b/science/p5-Chemistry-Ring/Makefile @@ -15,10 +15,10 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Represent a ring as a substructure of a molecule -BUILD_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Statistics/Regression.pm:${PORTSDIR}/math/p5-Statistics-Regression -RUN_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Statistics/Regression.pm:${PORTSDIR}/math/p5-Statistics-Regression +BUILD_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Statistics-Regression>=0:${PORTSDIR}/math/p5-Statistics-Regression +RUN_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Statistics-Regression>=0:${PORTSDIR}/math/p5-Statistics-Regression MAN3= Chemistry::Ring.3 Chemistry::Ring::Find.3 diff --git a/science/p5-PerlMol/Makefile b/science/p5-PerlMol/Makefile index 9f5c0a1a2008..12ed99ffd4e6 100644 --- a/science/p5-PerlMol/Makefile +++ b/science/p5-PerlMol/Makefile @@ -15,52 +15,52 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Perl modules for molecular chemistry -BUILD_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/MacroMol.pm:${PORTSDIR}/science/p5-Chemistry-MacroMol \ - ${SITE_PERL}/Parse/Yapp/Parse.pm:${PORTSDIR}/devel/p5-Parse-Yapp \ - ${SITE_PERL}/Chemistry/File/SMILES.pm:${PORTSDIR}/science/p5-Chemistry-File-SMILES \ - ${SITE_PERL}/Chemistry/File/SMARTS.pm:${PORTSDIR}/science/p5-Chemistry-File-SMARTS \ - ${SITE_PERL}/Chemistry/InternalCoords.pm:${PORTSDIR}/science/p5-Chemistry-InternalCoords \ - ${SITE_PERL}/Chemistry/Pattern.pm:${PORTSDIR}/science/p5-Chemistry-Pattern \ - ${SITE_PERL}/Chemistry/Ring.pm:${PORTSDIR}/science/p5-Chemistry-Ring \ - ${SITE_PERL}/Chemistry/Isotope.pm:${PORTSDIR}/science/p5-Chemistry-Isotope \ - ${SITE_PERL}/Chemistry/3DBuilder.pm:${PORTSDIR}/science/p5-Chemistry-3DBuilder \ - ${SITE_PERL}/Chemistry/Bond/Find.pm:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ - ${SITE_PERL}/Chemistry/Canonicalize.pm:${PORTSDIR}/science/p5-Chemistry-Canonicalize \ - ${SITE_PERL}/Chemistry/File/PDB.pm:${PORTSDIR}/science/p5-Chemistry-File-PDB \ - ${SITE_PERL}/Chemistry/File/XYZ.pm:${PORTSDIR}/science/p5-Chemistry-File-XYZ \ - ${SITE_PERL}/Chemistry/File/VRML.pm:${PORTSDIR}/science/p5-Chemistry-File-VRML \ - ${SITE_PERL}/Chemistry/File/SLN.pm:${PORTSDIR}/science/p5-Chemistry-File-SLN \ - ${SITE_PERL}/Chemistry/File/Mopac.pm:${PORTSDIR}/science/p5-Chemistry-File-Mopac \ - ${SITE_PERL}/Chemistry/File/MDLMol.pm:${PORTSDIR}/science/p5-Chemistry-File-MDLMol \ - ${SITE_PERL}/Chemistry/Reaction.pm:${PORTSDIR}/science/p5-Chemistry-Reaction \ - ${SITE_PERL}/Chemistry/FormulaPattern.pm:${PORTSDIR}/science/p5-Chemistry-FormulaPattern \ - ${SITE_PERL}/Chemistry/MidasPattern.pm:${PORTSDIR}/science/p5-Chemistry-MidasPattern \ - ${SITE_PERL}/Chemistry/Mok.pm:${PORTSDIR}/science/p5-Chemistry-Mok \ - ${SITE_PERL}/Statistics/Regression.pm:${PORTSDIR}/math/p5-Statistics-Regression -BUILD_DEPENDS= ${SITE_PERL}/Chemistry/Mol.pm:${PORTSDIR}/science/p5-Chemistry-Mol \ - ${SITE_PERL}/Chemistry/MacroMol.pm:${PORTSDIR}/science/p5-Chemistry-MacroMol \ - ${SITE_PERL}/Parse/Yapp/Parse.pm:${PORTSDIR}/devel/p5-Parse-Yapp \ - ${SITE_PERL}/Chemistry/File/SMILES.pm:${PORTSDIR}/science/p5-Chemistry-File-SMILES \ - ${SITE_PERL}/Chemistry/File/SMARTS.pm:${PORTSDIR}/science/p5-Chemistry-File-SMARTS \ - ${SITE_PERL}/Chemistry/InternalCoords.pm:${PORTSDIR}/science/p5-Chemistry-InternalCoords \ - ${SITE_PERL}/Chemistry/Pattern.pm:${PORTSDIR}/science/p5-Chemistry-Pattern \ - ${SITE_PERL}/Chemistry/Ring.pm:${PORTSDIR}/science/p5-Chemistry-Ring \ - ${SITE_PERL}/Chemistry/Isotope.pm:${PORTSDIR}/science/p5-Chemistry-Isotope \ - ${SITE_PERL}/Chemistry/3DBuilder.pm:${PORTSDIR}/science/p5-Chemistry-3DBuilder \ - ${SITE_PERL}/Chemistry/Bond/Find.pm:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ - ${SITE_PERL}/Chemistry/Canonicalize.pm:${PORTSDIR}/science/p5-Chemistry-Canonicalize \ - ${SITE_PERL}/Chemistry/File/PDB.pm:${PORTSDIR}/science/p5-Chemistry-File-PDB \ - ${SITE_PERL}/Chemistry/File/XYZ.pm:${PORTSDIR}/science/p5-Chemistry-File-XYZ \ - ${SITE_PERL}/Chemistry/File/VRML.pm:${PORTSDIR}/science/p5-Chemistry-File-VRML \ - ${SITE_PERL}/Chemistry/File/SLN.pm:${PORTSDIR}/science/p5-Chemistry-File-SLN \ - ${SITE_PERL}/Chemistry/File/Mopac.pm:${PORTSDIR}/science/p5-Chemistry-File-Mopac \ - ${SITE_PERL}/Chemistry/File/MDLMol.pm:${PORTSDIR}/science/p5-Chemistry-File-MDLMol \ - ${SITE_PERL}/Chemistry/Reaction.pm:${PORTSDIR}/science/p5-Chemistry-Reaction \ - ${SITE_PERL}/Chemistry/FormulaPattern.pm:${PORTSDIR}/science/p5-Chemistry-FormulaPattern \ - ${SITE_PERL}/Chemistry/MidasPattern.pm:${PORTSDIR}/science/p5-Chemistry-MidasPattern \ - ${SITE_PERL}/Chemistry/Mok.pm:${PORTSDIR}/science/p5-Chemistry-Mok \ - ${SITE_PERL}/Statistics/Regression.pm:${PORTSDIR}/math/p5-Statistics-Regression +BUILD_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-MacroMol>=0:${PORTSDIR}/science/p5-Chemistry-MacroMol \ + p5-Parse-Yapp>=0:${PORTSDIR}/devel/p5-Parse-Yapp \ + p5-Chemistry-File-SMILES>=0:${PORTSDIR}/science/p5-Chemistry-File-SMILES \ + p5-Chemistry-File-SMARTS>=0:${PORTSDIR}/science/p5-Chemistry-File-SMARTS \ + p5-Chemistry-InternalCoords>=0:${PORTSDIR}/science/p5-Chemistry-InternalCoords \ + p5-Chemistry-Pattern>=0:${PORTSDIR}/science/p5-Chemistry-Pattern \ + p5-Chemistry-Ring>=0:${PORTSDIR}/science/p5-Chemistry-Ring \ + p5-Chemistry-Isotope>=0:${PORTSDIR}/science/p5-Chemistry-Isotope \ + p5-Chemistry-3DBuilder>=0:${PORTSDIR}/science/p5-Chemistry-3DBuilder \ + p5-Chemistry-Bond-Find>=0:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ + p5-Chemistry-Canonicalize>=0:${PORTSDIR}/science/p5-Chemistry-Canonicalize \ + p5-Chemistry-File-PDB>=0:${PORTSDIR}/science/p5-Chemistry-File-PDB \ + p5-Chemistry-File-XYZ>=0:${PORTSDIR}/science/p5-Chemistry-File-XYZ \ + p5-Chemistry-File-VRML>=0:${PORTSDIR}/science/p5-Chemistry-File-VRML \ + p5-Chemistry-File-SLN>=0:${PORTSDIR}/science/p5-Chemistry-File-SLN \ + p5-Chemistry-File-Mopac>=0:${PORTSDIR}/science/p5-Chemistry-File-Mopac \ + p5-Chemistry-File-MDLMol>=0:${PORTSDIR}/science/p5-Chemistry-File-MDLMol \ + p5-Chemistry-Reaction>=0:${PORTSDIR}/science/p5-Chemistry-Reaction \ + p5-Chemistry-FormulaPattern>=0:${PORTSDIR}/science/p5-Chemistry-FormulaPattern \ + p5-Chemistry-MidasPattern>=0:${PORTSDIR}/science/p5-Chemistry-MidasPattern \ + p5-Chemistry-Mok>=0:${PORTSDIR}/science/p5-Chemistry-Mok \ + p5-Statistics-Regression>=0:${PORTSDIR}/math/p5-Statistics-Regression +BUILD_DEPENDS= p5-Chemistry-Mol>=0:${PORTSDIR}/science/p5-Chemistry-Mol \ + p5-Chemistry-MacroMol>=0:${PORTSDIR}/science/p5-Chemistry-MacroMol \ + p5-Parse-Yapp>=0:${PORTSDIR}/devel/p5-Parse-Yapp \ + p5-Chemistry-File-SMILES>=0:${PORTSDIR}/science/p5-Chemistry-File-SMILES \ + p5-Chemistry-File-SMARTS>=0:${PORTSDIR}/science/p5-Chemistry-File-SMARTS \ + p5-Chemistry-InternalCoords>=0:${PORTSDIR}/science/p5-Chemistry-InternalCoords \ + p5-Chemistry-Pattern>=0:${PORTSDIR}/science/p5-Chemistry-Pattern \ + p5-Chemistry-Ring>=0:${PORTSDIR}/science/p5-Chemistry-Ring \ + p5-Chemistry-Isotope>=0:${PORTSDIR}/science/p5-Chemistry-Isotope \ + p5-Chemistry-3DBuilder>=0:${PORTSDIR}/science/p5-Chemistry-3DBuilder \ + p5-Chemistry-Bond-Find>=0:${PORTSDIR}/science/p5-Chemistry-Bond-Find \ + p5-Chemistry-Canonicalize>=0:${PORTSDIR}/science/p5-Chemistry-Canonicalize \ + p5-Chemistry-File-PDB>=0:${PORTSDIR}/science/p5-Chemistry-File-PDB \ + p5-Chemistry-File-XYZ>=0:${PORTSDIR}/science/p5-Chemistry-File-XYZ \ + p5-Chemistry-File-VRML>=0:${PORTSDIR}/science/p5-Chemistry-File-VRML \ + p5-Chemistry-File-SLN>=0:${PORTSDIR}/science/p5-Chemistry-File-SLN \ + p5-Chemistry-File-Mopac>=0:${PORTSDIR}/science/p5-Chemistry-File-Mopac \ + p5-Chemistry-File-MDLMol>=0:${PORTSDIR}/science/p5-Chemistry-File-MDLMol \ + p5-Chemistry-Reaction>=0:${PORTSDIR}/science/p5-Chemistry-Reaction \ + p5-Chemistry-FormulaPattern>=0:${PORTSDIR}/science/p5-Chemistry-FormulaPattern \ + p5-Chemistry-MidasPattern>=0:${PORTSDIR}/science/p5-Chemistry-MidasPattern \ + p5-Chemistry-Mok>=0:${PORTSDIR}/science/p5-Chemistry-Mok \ + p5-Statistics-Regression>=0:${PORTSDIR}/math/p5-Statistics-Regression PERL_CONFIGURE= yes |