Related to revision 499061 bump ports with USES=fortran to have them

benefit from the improved situation where libgcc_s is only used when
absolutely necessary.

Suggested by:	tijl

82 files changed, 82 insertions, 63 deletions

diff --git a/science/PETSc/Makefile b/science/PETSc/Makefile
index e07f446410c4..f0d41f5225ba 100644
--- a/science/PETSc/Makefile
+++ b/science/PETSc/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	PETSc
 DISTVERSION=	3.10.2
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science devel
 MASTER_SITES=	http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/
 DISTNAME=	${PORTNAME:tl}-${DISTVERSION}
diff --git a/science/abinit/Makefile b/science/abinit/Makefile
index 1f2cd7a01352..63d8d005f7bc 100644
--- a/science/abinit/Makefile
+++ b/science/abinit/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	abinit
 DISTVERSION=	8.10.3
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 MASTER_SITES=	https://www.abinit.org/sites/default/files/packages/
 
diff --git a/science/aircraft-datcom/Makefile b/science/aircraft-datcom/Makefile
index 5ad48c6ebc14..63fddb4a9833 100644
--- a/science/aircraft-datcom/Makefile
+++ b/science/aircraft-datcom/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	aircraft-datcom
 DISTVERSION=	0.0.20120723
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	science
 
 MAINTAINER=	mike.d.ft402@gmail.com
diff --git a/science/atom/Makefile b/science/atom/Makefile
index 4e580f9baeb9..16bcf2d4be5f 100644
--- a/science/atom/Makefile
+++ b/science/atom/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	atom
 DISTVERSION=	4.2.7-100
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	science
 MASTER_SITES=	https://departments.icmab.es/leem/siesta/Pseudopotentials/Code/ \
 		https://departments.icmab.es/leem/siesta/Pseudopotentials/:lic
diff --git a/science/atompaw/Makefile b/science/atompaw/Makefile
index f864ab53213e..caea2c8fc0e7 100644
--- a/science/atompaw/Makefile
+++ b/science/atompaw/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	atompaw
 DISTVERSION=	4.1.0.5
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 MASTER_SITES=	http://users.wfu.edu/natalie/papers/pwpaw/
 
diff --git a/science/bagel/Makefile b/science/bagel/Makefile
index c045b60eb141..a7e9d7412237 100644
--- a/science/bagel/Makefile
+++ b/science/bagel/Makefile
@@ -3,7 +3,7 @@
 PORTNAME=	bagel
 DISTVERSIONPREFIX=	v
 DISTVERSION=	1.2.2
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/science/berkeleygw/Makefile b/science/berkeleygw/Makefile
index e9b78ac23316..8986d80cfb43 100644
--- a/science/berkeleygw/Makefile
+++ b/science/berkeleygw/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	BerkeleyGW
 DISTVERSION=	2.0.0
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 MASTER_SITES=	https://berkeley.box.com/shared/static/
 DISTFILES=	wkqu37wu77tll53r8t1soe6ozqja67yy.gz
diff --git a/science/cdf/Makefile b/science/cdf/Makefile
index 27292794dea0..e43e5279886e 100644
--- a/science/cdf/Makefile
+++ b/science/cdf/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	cdf3
 PORTVERSION=	3.3.0
-PORTREVISION=	11
+PORTREVISION=	12
 CATEGORIES=	science
 MASTER_SITES=	LOCAL/thierry/${PORTNAME} \
 		ftp://cdaweb.gsfc.nasa.gov/pub/cdf/dist/cdf${VER}/unix/
diff --git a/science/cgnslib/Makefile b/science/cgnslib/Makefile
index e93d2b1b79e5..b8e8ee0f9fdc 100644
--- a/science/cgnslib/Makefile
+++ b/science/cgnslib/Makefile
@@ -4,6 +4,7 @@
 PORTNAME=	cgnslib
 DISTVERSIONPREFIX=	v
 DISTVERSION=	3.4.0
+PORTREVISION=	1
 PORTEPOCH=	1
 CATEGORIES=	science
 
diff --git a/science/chemps2/Makefile b/science/chemps2/Makefile
index 7f124455a217..a0143639b3c9 100644
--- a/science/chemps2/Makefile
+++ b/science/chemps2/Makefile
@@ -3,7 +3,7 @@
 PORTNAME=	CheMPS2
 DISTVERSIONPREFIX=	v
 DISTVERSION=	1.8.9
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	science
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/science/chrono/Makefile b/science/chrono/Makefile
index ef1f0c505077..2050b8442c33 100644
--- a/science/chrono/Makefile
+++ b/science/chrono/Makefile
@@ -3,7 +3,7 @@
 PORTNAME=	chrono
 DISTVERSION=	2.0.0-9070
 DISTVERSIONSUFFIX=	-g57a828dc0
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	science devel
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/science/clipper/Makefile b/science/clipper/Makefile
index 6eb15c66dedf..fdaa588f3e6b 100644
--- a/science/clipper/Makefile
+++ b/science/clipper/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	clipper
 DISTVERSION=	2.1.20180802
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 MASTER_SITES=	https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/dependencies/
 
diff --git a/science/code_saturne/Makefile b/science/code_saturne/Makefile
index ff8b3a575392..fe6eab63e1bc 100644
--- a/science/code_saturne/Makefile
+++ b/science/code_saturne/Makefile
@@ -4,7 +4,7 @@
 PORTNAME=	code_saturne
 PORTVERSION=	5.3.2
 DISTVERSIONPREFIX=	v
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science parallel
 
 MAINTAINER=	thierry@FreeBSD.org
diff --git a/science/coot/Makefile b/science/coot/Makefile
index b8a033a976d3..ed2ba0632e11 100644
--- a/science/coot/Makefile
+++ b/science/coot/Makefile
@@ -2,6 +2,7 @@
 
 PORTNAME=	coot
 DISTVERSION=	0.8.9.2
+PORTREVISION=	1
 CATEGORIES=	science
 MASTER_SITES=	https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/${PORTNAME}/source/releases/ \
 		https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/${PORTNAME}/dependencies/:data
diff --git a/science/cp2k/Makefile b/science/cp2k/Makefile
index 9a76ed905841..37fc8ea73398 100644
--- a/science/cp2k/Makefile
+++ b/science/cp2k/Makefile
@@ -3,7 +3,7 @@
 PORTNAME=	cp2k
 DISTVERSIONPREFIX=	v
 DISTVERSION=	6.1.0
-PORTREVISION=	5
+PORTREVISION=	6
 CATEGORIES=	science
 
 PATCH_SITES=	https://github.com/${PORTNAME}/${PORTNAME}/commit/
diff --git a/science/dalton/Makefile b/science/dalton/Makefile
index 692ca3243d7d..0063ab3521ec 100644
--- a/science/dalton/Makefile
+++ b/science/dalton/Makefile
@@ -2,6 +2,7 @@
 
 PORTNAME=	dalton
 DISTVERSION=	2018.0
+PORTREVISION=	1
 CATEGORIES=	science
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/science/dcl/Makefile b/science/dcl/Makefile
index 666a33785304..6b17e14ff268 100644
--- a/science/dcl/Makefile
+++ b/science/dcl/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	dcl
 PORTVERSION=	5.4.8
-PORTREVISION=	7
+PORTREVISION=	8
 CATEGORIES=	science graphics
 MASTER_SITES=	http://www.gfd-dennou.org/library/dcl/ \
 		http://dennou-h.gfd-dennou.org/library/dcl/ \
diff --git a/science/dftbplus/Makefile b/science/dftbplus/Makefile
index 6d544f87de72..959b8e281fdf 100644
--- a/science/dftbplus/Makefile
+++ b/science/dftbplus/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	dftbplus
 DISTVERSION=	18.2
-PORTREVISION=	4
+PORTREVISION=	5
 CATEGORIES=	science
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/science/dkh/Makefile b/science/dkh/Makefile
index 0943b67482bb..1bc1e42e587e 100644
--- a/science/dkh/Makefile
+++ b/science/dkh/Makefile
@@ -3,7 +3,7 @@
 PORTNAME=	dkh
 DISTVERSIONPREFIX=	v
 DISTVERSION=	1.2
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	science
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/science/dlib-cpp/Makefile b/science/dlib-cpp/Makefile
index 3a40a5710c39..ec23717920f2 100644
--- a/science/dlib-cpp/Makefile
+++ b/science/dlib-cpp/Makefile
@@ -2,6 +2,7 @@
 
 PORTNAME=	dlib
 DISTVERSION=	19.17
+PORTREVISION=	1
 CATEGORIES=	science devel math
 MASTER_SITES=	http://dlib.net/files/
 PKGNAMESUFFIX=	-cpp
diff --git a/science/dlpoly-classic/Makefile b/science/dlpoly-classic/Makefile
index da1ef2f0885c..e5cd3fedc84f 100644
--- a/science/dlpoly-classic/Makefile
+++ b/science/dlpoly-classic/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	dlpoly
 PORTVERSION=	1.8
-PORTREVISION=	16
+PORTREVISION=	17
 CATEGORIES=	science java
 MASTER_SITES=	http://ccpforge.cse.rl.ac.uk/gf/download/frsrelease/238/2028/
 PKGNAMESUFFIX=	classic
diff --git a/science/elk/Makefile b/science/elk/Makefile
index 542c89c6ef4c..68b243c2babd 100644
--- a/science/elk/Makefile
+++ b/science/elk/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	elk
 DISTVERSION=	5.2.14
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 MASTER_SITES=	SF/${PORTNAME}/
 PKGNAMESUFFIX=	-chemistry
diff --git a/science/erd/Makefile b/science/erd/Makefile
index 9b028f95835e..2c819bbd1f37 100644
--- a/science/erd/Makefile
+++ b/science/erd/Makefile
@@ -3,7 +3,7 @@
 PORTNAME=	erd
 DISTVERSIONPREFIX=	v
 DISTVERSION=	3.0.6
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	science
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/science/erkale/Makefile b/science/erkale/Makefile
index c81d63f336c5..87afbb1f3a27 100644
--- a/science/erkale/Makefile
+++ b/science/erkale/Makefile
@@ -2,6 +2,7 @@
 
 PORTNAME=	erkale
 DISTVERSION=	g20190412
+PORTREVISION=	1
 CATEGORIES=	science
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/science/esys-particle/Makefile b/science/esys-particle/Makefile
index df9b0e5e9364..0713dc51540b 100644
--- a/science/esys-particle/Makefile
+++ b/science/esys-particle/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	esys-particle
 DISTVERSION=	2.3.5
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	science
 MASTER_SITES=	https://launchpad.net/esys-particle/trunk/${DISTVERSION}/+download/
 DISTNAME=	ESyS-Particle-${DISTVERSION}
diff --git a/science/fleur/Makefile b/science/fleur/Makefile
index 85824d9968fd..f0fb329c504a 100644
--- a/science/fleur/Makefile
+++ b/science/fleur/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	fleur
 DISTVERSION=	0.27-3 # Release 3 of Version 0.27
-PORTREVISION=	5
+PORTREVISION=	6
 CATEGORIES=	science
 MASTER_SITES=	http://www.flapw.de/pm/uploads/FLEUR/
 DISTNAME=	fleurMaXR${DISTVERSION:C/.*-//}
diff --git a/science/fvcom/Makefile b/science/fvcom/Makefile
index dd685ce41224..30e6095aca9d 100644
--- a/science/fvcom/Makefile
+++ b/science/fvcom/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	fvcom
 PORTVERSION=	2.7.1
-PORTREVISION?=	13
+PORTREVISION?=	14
 CATEGORIES=	science
 MASTER_SITES=	http://fvcom.smast.umassd.edu/FVCOM/index.html/
 DISTNAME=	sourcecode1
diff --git a/science/gamess-us/Makefile b/science/gamess-us/Makefile
index ab4b90cb0582..2d7416fb7e8c 100644
--- a/science/gamess-us/Makefile
+++ b/science/gamess-us/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	gamess
 DISTVERSION=	20181013
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	science
 PKGNAMESUFFIX=	-us # "US" fork
 DISTNAME=	gamess-current
diff --git a/science/gdma/Makefile b/science/gdma/Makefile
index b0a56d071a00..5ad30bc6c1e3 100644
--- a/science/gdma/Makefile
+++ b/science/gdma/Makefile
@@ -3,7 +3,7 @@
 PORTNAME=	gdma
 DISTVERSIONPREFIX=	v
 DISTVERSION=	2.2.6
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	science
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/science/getdp/Makefile b/science/getdp/Makefile
index 84c5f4c8803e..5669c2af3f82 100644
--- a/science/getdp/Makefile
+++ b/science/getdp/Makefile
@@ -3,6 +3,7 @@
 
 PORTNAME=	getdp
 PORTVERSION=	3.1.0
+PORTREVISION=	1
 CATEGORIES=	science
 MASTER_SITES=	http://www.geuz.org/getdp/src/
 DISTNAME=	${PORTNAME}-${PORTVERSION}-source
diff --git a/science/ghemical/Makefile b/science/ghemical/Makefile
index 659847666af5..8914d04c46dd 100644
--- a/science/ghemical/Makefile
+++ b/science/ghemical/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	ghemical
 PORTVERSION=	3.0.0
-PORTREVISION=	17
+PORTREVISION=	18
 CATEGORIES=	science
 MASTER_SITES=	http://bioinformatics.org/ghemical/download/%SUBDIR%/
 MASTER_SITE_SUBDIR=	release20111012 current
diff --git a/science/gnudatalanguage/Makefile b/science/gnudatalanguage/Makefile
index 0fb9e5389459..9ed3ead3752c 100644
--- a/science/gnudatalanguage/Makefile
+++ b/science/gnudatalanguage/Makefile
@@ -4,7 +4,7 @@
 PORTNAME=	gnudatalanguage
 PORTVERSION=	0.9.9
 DISTVERSIONPREFIX=	v
-PORTREVISION=	6
+PORTREVISION=	7
 CATEGORIES=	science lang
 .if defined(BUILD_PYTHON_MODULE)
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
diff --git a/science/gromacs/Makefile b/science/gromacs/Makefile
index b693dd4b114c..249964341610 100644
--- a/science/gromacs/Makefile
+++ b/science/gromacs/Makefile
@@ -3,6 +3,7 @@
 
 PORTNAME=	gromacs
 DISTVERSION=	2019.2
+PORTREVISION=	1
 CATEGORIES=	science
 MASTER_SITES=	ftp://ftp.gromacs.org/pub/gromacs/
 
diff --git a/science/harminv/Makefile b/science/harminv/Makefile
index a2c4fdaa1da7..de3faf866d80 100644
--- a/science/harminv/Makefile
+++ b/science/harminv/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	harminv
 PORTVERSION=	1.3.1
-PORTREVISION=	14
+PORTREVISION=	15
 CATEGORIES=	science
 MASTER_SITES=	http://ab-initio.mit.edu/harminv/
 
diff --git a/science/hdf/Makefile b/science/hdf/Makefile
index f1c93f98d96e..20cdbae9f443 100644
--- a/science/hdf/Makefile
+++ b/science/hdf/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	hdf
 PORTVERSION=	4.2.11
-PORTREVISION=	6
+PORTREVISION=	7
 PORTEPOCH=	1
 CATEGORIES=	science archivers graphics
 MASTER_SITES=	http://www.hdfgroup.org/ftp/HDF/releases/HDF${PORTVERSION}/src/ \
diff --git a/science/hdf5-18/Makefile b/science/hdf5-18/Makefile
index e2021bc15d7d..a170af02d9b3 100644
--- a/science/hdf5-18/Makefile
+++ b/science/hdf5-18/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	hdf5
 PORTVERSION=	1.8.21 # When PORTVERSION changes, please update french/med/files/patch-configure
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science archivers graphics
 MASTER_SITES=	https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.8/${PORTNAME}-${PORTVERSION}/src/	\
 		http://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.8/${PORTNAME}-${PORTVERSION}/src/	\
diff --git a/science/hdf5/Makefile b/science/hdf5/Makefile
index c1f244f21f12..6a2c4107f528 100644
--- a/science/hdf5/Makefile
+++ b/science/hdf5/Makefile
@@ -3,6 +3,7 @@
 
 PORTNAME=	hdf5
 PORTVERSION=	1.10.5
+PORTREVISION=	1
 CATEGORIES=	science archivers graphics
 MASTER_SITES=	https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-${PORTVERSION:R}/${DISTNAME}/src/ \
 		LOCAL/sunpoet
diff --git a/science/hypre/Makefile b/science/hypre/Makefile
index f8b55affce67..c0888aeb1093 100644
--- a/science/hypre/Makefile
+++ b/science/hypre/Makefile
@@ -4,7 +4,7 @@
 PORTNAME=	hypre
 DISTVERSIONPREFIX=	v
 DISTVERSION=	2.15.1
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/science/iboview/Makefile b/science/iboview/Makefile
index 301a6510b056..4459c4c94900 100644
--- a/science/iboview/Makefile
+++ b/science/iboview/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	iboview
 PORTVERSION=	20150427
-PORTREVISION=	16
+PORTREVISION=	17
 CATEGORIES=	science
 MASTER_SITES=	http://www.iboview.org/bin/
 DISTNAME=	ibo-view.20150427
diff --git a/science/isaac-cfd/Makefile b/science/isaac-cfd/Makefile
index 3cbf2825b88e..58d38faa1721 100644
--- a/science/isaac-cfd/Makefile
+++ b/science/isaac-cfd/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	isaac
 PORTVERSION=	4.2
-PORTREVISION=	14
+PORTREVISION=	15
 CATEGORIES=	science
 MASTER_SITES=	SF/${PORTNAME}-cfd/${PORTNAME}-cfd/ISAAC%20Version%20${PORTVERSION}
 DISTFILES=	${PORTNAME}src.4_2${EXTRACT_SUFX} ${PORTNAME}mk.4_2${EXTRACT_SUFX}
diff --git a/science/jdftx/Makefile b/science/jdftx/Makefile
index f4bcbe543388..4a93fbeddd7b 100644
--- a/science/jdftx/Makefile
+++ b/science/jdftx/Makefile
@@ -3,7 +3,7 @@
 PORTNAME=	jdftx
 DISTVERSIONPREFIX=	v
 DISTVERSION=	1.4.2-74
-PORTREVISION=	5
+PORTREVISION=	6
 DISTVERSIONSUFFIX=	-gba743849
 CATEGORIES=	science
 
diff --git a/science/lammps/Makefile b/science/lammps/Makefile
index 367fe2e77c42..c51c1b268731 100644
--- a/science/lammps/Makefile
+++ b/science/lammps/Makefile
@@ -2,6 +2,7 @@
 
 PORTNAME=	lammps
 PORTVERSION=	${GH_TAGNAME:C/(stable|patch)_([0-9]{1,2})([A-Z][a-z][a-z])([0-9]{4})/\4.\3.\2/S/Jan/01/S/Feb/02/S/Mar/03/S/Apr/04/S/May/05/S/Jun/06/S/Jul/07/S/Aug/08/S/Sep/09/S/Oct/10/S/Nov/11/S/Dec/12/}
+PORTREVISION=	1
 CATEGORIES=	science
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/science/latte/Makefile b/science/latte/Makefile
index 78cf428dd025..47c40294a946 100644
--- a/science/latte/Makefile
+++ b/science/latte/Makefile
@@ -3,7 +3,7 @@
 PORTNAME=	latte
 DISTVERSIONPREFIX=	v
 DISTVERSION=	1.2.1
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/science/libccp4/Makefile b/science/libccp4/Makefile
index 265da3ea37f1..1190eba70917 100644
--- a/science/libccp4/Makefile
+++ b/science/libccp4/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	libccp4
 DISTVERSION=	6.5.1
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	science
 MASTER_SITES=	ftp://ftp.ccp4.ac.uk/opensource/
 
diff --git a/science/libctl/Makefile b/science/libctl/Makefile
index 313087e209f3..97e454b89584 100644
--- a/science/libctl/Makefile
+++ b/science/libctl/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	libctl
 PORTVERSION=	3.2.2
-PORTREVISION=	6
+PORTREVISION=	7
 CATEGORIES=	science math
 MASTER_SITES=	http://ab-initio.mit.edu/libctl/
 
diff --git a/science/libghemical/Makefile b/science/libghemical/Makefile
index 1ca71b066e45..b6229143c8c9 100644
--- a/science/libghemical/Makefile
+++ b/science/libghemical/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	libghemical
 PORTVERSION=	3.0.0
-PORTREVISION=	14
+PORTREVISION=	15
 CATEGORIES=	science
 MASTER_SITES=	http://bioinformatics.org/ghemical/download/release20111012/	\
 		http://bioinformatics.org/ghemical/download/current/
diff --git a/science/libgridxc/Makefile b/science/libgridxc/Makefile
index b3691c938779..d0f91a71324b 100644
--- a/science/libgridxc/Makefile
+++ b/science/libgridxc/Makefile
@@ -2,6 +2,7 @@
 
 PORTNAME=	libgridxc
 DISTVERSION=	0.8.5
+PORTREVISION=	1
 CATEGORIES=	science
 MASTER_SITES=	https://launchpad.net/${PORTNAME}/trunk/${DISTVERSION:R}/+download/
 
diff --git a/science/libxc/Makefile b/science/libxc/Makefile
index 3edda4a88f48..cc008b9f8b65 100644
--- a/science/libxc/Makefile
+++ b/science/libxc/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	libxc
 DISTVERSION=	4.2.3
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 MASTER_SITES=	http://www.tddft.org/programs/octopus/download/libxc/${DISTVERSION}/
 
diff --git a/science/liggghts/Makefile b/science/liggghts/Makefile
index 7699263d6ab1..b6eb633e7b38 100644
--- a/science/liggghts/Makefile
+++ b/science/liggghts/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	liggghts
 DISTVERSION=	3.8.0
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	science
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/science/lm/Makefile b/science/lm/Makefile
index a44eda55c4ea..79b18f7872c6 100644
--- a/science/lm/Makefile
+++ b/science/lm/Makefile
@@ -3,7 +3,7 @@
 PORTNAME=	lm
 DISTVERSION=	2.3.0
 DISTVERSIONSUFFIX=	-src
-PORTREVISION=	5
+PORTREVISION=	6
 CATEGORIES=	science
 MASTER_SITES=	http://scs.illinois.edu/schulten/${PORTNAME}/download/${PORTNAME}${DISTVERSION:R:S/.//}/
 PKGNAMESUFFIX=	-uiuc
diff --git a/science/madness/Makefile b/science/madness/Makefile
index de9a27a2fbc5..44606f8164d2 100644
--- a/science/madness/Makefile
+++ b/science/madness/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	madness
 DISTVERSION=	0.10.1.20180823
-PORTREVISION=	5
+PORTREVISION=	6
 CATEGORIES=	science
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/science/mbdyn/Makefile b/science/mbdyn/Makefile
index 5a0734f9352f..f9658964b319 100644
--- a/science/mbdyn/Makefile
+++ b/science/mbdyn/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	mbdyn
 PORTVERSION=	1.7.2
-PORTREVISION=	6
+PORTREVISION=	7
 CATEGORIES=	science
 MASTER_SITES=	https://www.mbdyn.org/userfiles/downloads/
 
diff --git a/science/mcstas-comps/Makefile b/science/mcstas-comps/Makefile
index 207e1e7e3a01..7421bfacd527 100644
--- a/science/mcstas-comps/Makefile
+++ b/science/mcstas-comps/Makefile
@@ -3,6 +3,7 @@
 
 PORTNAME=	mcstas-comps
 PORTVERSION=	2.5
+PORTREVISION=	1
 CATEGORIES=	science
 MASTER_SITES=	http://download.mcstas.org/${PORTNAME:C/-comps\$//}-${PORTVERSION}/unix/
 DISTNAME=	${PORTNAME}-${PORTVERSION}-src
diff --git a/science/mdynamix/Makefile b/science/mdynamix/Makefile
index fb24c08b3b27..3133d2becb25 100644
--- a/science/mdynamix/Makefile
+++ b/science/mdynamix/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	mdynamix
 DISTVERSION=	5.2.8
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	science
 MASTER_SITES=	http://www.fos.su.se/~sasha/${PORTNAME}/versions/
 DISTNAME=	md${DISTVERSION:S/.//g}
diff --git a/science/meep/Makefile b/science/meep/Makefile
index 203385276a9c..731924479616 100644
--- a/science/meep/Makefile
+++ b/science/meep/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	meep
 PORTVERSION=	1.2.1
-PORTREVISION=	17
+PORTREVISION=	18
 CATEGORIES=	science
 MASTER_SITES=	http://ab-initio.mit.edu/meep/
 
diff --git a/science/mpb/Makefile b/science/mpb/Makefile
index 7a92f614644d..bf8d7f816304 100644
--- a/science/mpb/Makefile
+++ b/science/mpb/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	mpb
 PORTVERSION=	1.5
-PORTREVISION=	12
+PORTREVISION=	13
 CATEGORIES=	science
 MASTER_SITES=	http://ab-initio.mit.edu/mpb/
 
diff --git a/science/mpqc/Makefile b/science/mpqc/Makefile
index 0f1b2930f4e3..0d8fcfd625c6 100644
--- a/science/mpqc/Makefile
+++ b/science/mpqc/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	mpqc
 PORTVERSION=	2.3.1
-PORTREVISION=	42
+PORTREVISION=	43
 CATEGORIES=	science parallel
 MASTER_SITES=	SF
 
diff --git a/science/multiwfn/Makefile b/science/multiwfn/Makefile
index 8da2ec468199..59d1a7c26b86 100644
--- a/science/multiwfn/Makefile
+++ b/science/multiwfn/Makefile
@@ -3,7 +3,7 @@
 PORTNAME=	multiwfn
 DISTVERSIONPREFIX=	v
 DISTVERSION=	3.4.1-0-14
-PORTREVISION=	1
+PORTREVISION=	2
 DISTVERSIONSUFFIX=	-ge873677
 CATEGORIES=	science
 
diff --git a/science/namd/Makefile b/science/namd/Makefile
index 0af9c352fd4a..279ee3f47104 100644
--- a/science/namd/Makefile
+++ b/science/namd/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	namd
 DISTVERSION=	2.12
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 DISTNAME=	${PORTNAME:tu}_${DISTVERSION}_Source
 
diff --git a/science/netcdf-fortran/Makefile b/science/netcdf-fortran/Makefile
index 8d785a2f45e2..52a55790d6ac 100644
--- a/science/netcdf-fortran/Makefile
+++ b/science/netcdf-fortran/Makefile
@@ -4,7 +4,7 @@
 PORTNAME=	netcdf-fortran
 PORTVERSION=	4.4.5
 DISTVERSIONPREFIX=	v
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 
 MAINTAINER=	sunpoet@FreeBSD.org
diff --git a/science/nwchem/Makefile b/science/nwchem/Makefile
index b8ae6ca2fa7b..e2575a4a025c 100644
--- a/science/nwchem/Makefile
+++ b/science/nwchem/Makefile
@@ -2,6 +2,7 @@
 
 PORTNAME=	nwchem
 PORTVERSION=	6.8.1.20190412
+PORTREVISION=	1
 CATEGORIES=	science
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/science/octopus/Makefile b/science/octopus/Makefile
index 446bc18b9fd7..3a4440b0d04c 100644
--- a/science/octopus/Makefile
+++ b/science/octopus/Makefile
@@ -2,6 +2,7 @@
 
 PORTNAME=	octopus
 DISTVERSION=	8.4
+PORTREVISION=	1
 CATEGORIES=	science
 MASTER_SITES=	http://www.tddft.org/programs/${PORTNAME}/download/${DISTVERSION}/
 
diff --git a/science/openkim/Makefile b/science/openkim/Makefile
index 8b90499ab024..632df3a884c3 100644
--- a/science/openkim/Makefile
+++ b/science/openkim/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	openkim
 PORTVERSION=	1.1.1
-PORTREVISION=	8
+PORTREVISION=	9
 CATEGORIES=	science
 MASTER_SITES=	http://s3.openkim.org/openkim-api/
 DISTNAME=	${PORTNAME}-api-v${PORTVERSION}
diff --git a/science/openmx/Makefile b/science/openmx/Makefile
index d9482b6088e2..f84cf65ee0d5 100644
--- a/science/openmx/Makefile
+++ b/science/openmx/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	openmx
 DISTVERSION=	3.8.5 # the 18June12 patch upgrades 3.8 -> 3.8.5
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	science
 MASTER_SITES=	http://www.openmx-square.org/ \
 		http://www.openmx-square.org/bugfixed/18June12/:patch
diff --git a/science/opensim-core/Makefile b/science/opensim-core/Makefile
index 114ac053eb04..8e2e6369ba13 100644
--- a/science/opensim-core/Makefile
+++ b/science/opensim-core/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	OpenSim
 DISTVERSION=	4.0
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 PKGNAMESUFFIX=	-core
 
diff --git a/science/pcmsolver/Makefile b/science/pcmsolver/Makefile
index bd88ec57c6af..61b6361f233b 100644
--- a/science/pcmsolver/Makefile
+++ b/science/pcmsolver/Makefile
@@ -3,6 +3,7 @@
 PORTNAME=	pcmsolver
 DISTVERSIONPREFIX=	v
 DISTVERSION=	1.2.3
+PORTREVISION=	1
 CATEGORIES=	science
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/science/pnetcdf/Makefile b/science/pnetcdf/Makefile
index 11533fdf4892..db8a76ad793f 100644
--- a/science/pnetcdf/Makefile
+++ b/science/pnetcdf/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	pnetcdf
 PORTVERSION=	1.8.1
-PORTREVISION=	7
+PORTREVISION=	8
 CATEGORIES=	science parallel
 MASTER_SITES=	http://cucis.ece.northwestern.edu/projects/PnetCDF/Release/ \
 		LOCAL/sunpoet
diff --git a/science/psychopy/Makefile b/science/psychopy/Makefile
index 7c52b0185812..13c72eb0a163 100644
--- a/science/psychopy/Makefile
+++ b/science/psychopy/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	psychopy
 DISTVERSION=	1.90.3
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	science python
 
 MAINTAINER=	ports@FreeBSD.org
diff --git a/science/py-obspy/Makefile b/science/py-obspy/Makefile
index 70e4e8e162bd..fcb6fe9f856d 100644
--- a/science/py-obspy/Makefile
+++ b/science/py-obspy/Makefile
@@ -3,6 +3,7 @@
 
 PORTNAME=	obspy
 PORTVERSION=	1.1.1
+PORTREVISION=	1
 CATEGORIES=	science python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
diff --git a/science/py-scikit-learn/Makefile b/science/py-scikit-learn/Makefile
index 8fc99a89a37d..1b9f71974710 100644
--- a/science/py-scikit-learn/Makefile
+++ b/science/py-scikit-learn/Makefile
@@ -3,6 +3,7 @@
 
 PORTNAME=	scikit-learn
 DISTVERSION=	0.20.2
+PORTREVISION=	1
 CATEGORIES=	science python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
diff --git a/science/py-scikit-sparse/Makefile b/science/py-scikit-sparse/Makefile
index ba20f3037efe..ef23e7c08527 100644
--- a/science/py-scikit-sparse/Makefile
+++ b/science/py-scikit-sparse/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	scikit-sparse
 DISTVERSION=	0.4.4
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
diff --git a/science/py-scipy/Makefile b/science/py-scipy/Makefile
index e1d2f8073987..2ebc2966c6b4 100644
--- a/science/py-scipy/Makefile
+++ b/science/py-scipy/Makefile
@@ -3,6 +3,7 @@
 
 PORTNAME=	scipy
 PORTVERSION=	1.2.0
+PORTREVISION=	1
 CATEGORIES=	science python
 MASTER_SITES=	https://docs.scipy.org/doc/scipy/:doc \
 		CHEESESHOP:source \
diff --git a/science/qmcpack/Makefile b/science/qmcpack/Makefile
index a34b328c5b24..769f20bbfefd 100644
--- a/science/qmcpack/Makefile
+++ b/science/qmcpack/Makefile
@@ -3,7 +3,7 @@
 PORTNAME=	qmcpack
 DISTVERSIONPREFIX=	v
 DISTVERSION=	3.7.0
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/science/quantum-espresso/Makefile b/science/quantum-espresso/Makefile
index b415449664dd..e7373c99cd97 100644
--- a/science/quantum-espresso/Makefile
+++ b/science/quantum-espresso/Makefile
@@ -3,6 +3,7 @@
 PORTNAME=	quantum-espresso
 DISTVERSIONPREFIX=	qe-
 DISTVERSION=	6.4.1
+PORTREVISION=	1
 CATEGORIES=	science
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/science/qwalk/Makefile b/science/qwalk/Makefile
index e64035cfebde..9fbf058e6a03 100644
--- a/science/qwalk/Makefile
+++ b/science/qwalk/Makefile
@@ -3,7 +3,7 @@
 PORTNAME=	qwalk
 DISTVERSIONPREFIX=	v
 DISTVERSION=	1.0.1-300
-PORTREVISION=	1
+PORTREVISION=	2
 DISTVERSIONSUFFIX=	-g1b7e381
 CATEGORIES=	science
 
diff --git a/science/siesta/Makefile b/science/siesta/Makefile
index 6d54bef5dd60..24f11081a534 100644
--- a/science/siesta/Makefile
+++ b/science/siesta/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	siesta
 DISTVERSION=	4.0.2
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 MASTER_SITES=	https://launchpad.net/${PORTNAME}/${DISTVERSION:R}/${DISTVERSION}/+download/
 
diff --git a/science/silo/Makefile b/science/silo/Makefile
index 1ad48f408cb1..011138c3a07e 100644
--- a/science/silo/Makefile
+++ b/science/silo/Makefile
@@ -4,7 +4,7 @@
 PORTNAME=	silo
 PORTVERSION=	4.10.2
 DISTVERSIONSUFFIX=	-bsd
-PORTREVISION=	11
+PORTREVISION=	12
 CATEGORIES=	science
 MASTER_SITES=	http://wci.llnl.gov/content/assets/docs/simulation/computer-codes/${PORTNAME}/silo-${PORTVERSION}/
 
diff --git a/science/simbody/Makefile b/science/simbody/Makefile
index c302d7fc8dd4..53b0137d5a97 100644
--- a/science/simbody/Makefile
+++ b/science/simbody/Makefile
@@ -3,7 +3,7 @@
 PORTNAME=	simbody
 DISTVERSIONPREFIX=	Simbody-
 DISTVERSION=	3.6.1
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science biology
 
 PATCH_SITES=	https://github.com/${PORTNAME}/${PORTNAME}/commit/
diff --git a/science/tinker/Makefile b/science/tinker/Makefile
index 416fa105eb96..f833020b24d8 100644
--- a/science/tinker/Makefile
+++ b/science/tinker/Makefile
@@ -3,6 +3,7 @@
 
 PORTNAME=	tinker
 DISTVERSION=	8.6.1
+PORTREVISION=	1
 CATEGORIES=	science
 MASTER_SITES=	https://dasher.wustl.edu/tinker/downloads/
 
diff --git a/science/v_sim/Makefile b/science/v_sim/Makefile
index b1ed953d0384..21745eafbe70 100644
--- a/science/v_sim/Makefile
+++ b/science/v_sim/Makefile
@@ -3,7 +3,7 @@
 
 PORTNAME=	v_sim
 PORTVERSION=	3.7.2
-PORTREVISION=	10
+PORTREVISION=	11
 CATEGORIES=	science
 MASTER_SITES=	http://inac.cea.fr/L_Sim/V_Sim/download/
 
diff --git a/science/wannier90/Makefile b/science/wannier90/Makefile
index fc1a7f89637e..49d297cdab94 100644
--- a/science/wannier90/Makefile
+++ b/science/wannier90/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	wannier90
 DISTVERSION=	2.1.0
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 MASTER_SITES=	http://www.wannier.org/code/
 
diff --git a/science/xcrysden/Makefile b/science/xcrysden/Makefile
index f2cdaee56330..f3df6229b36d 100644
--- a/science/xcrysden/Makefile
+++ b/science/xcrysden/Makefile
@@ -2,7 +2,7 @@
 
 PORTNAME=	xcrysden
 DISTVERSION=	1.5.60
-PORTREVISION=	6
+PORTREVISION=	7
 CATEGORIES=	science
 MASTER_SITES=	http://www.xcrysden.org/download/