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authorDirk Meyer <dinoex@FreeBSD.org>2002-09-10 14:04:06 +0000
committerDirk Meyer <dinoex@FreeBSD.org>2002-09-10 14:04:06 +0000
commitf593f06ed23ebe54b9a07a1365b2053354efea92 (patch)
treec80cc2d4efdbd02f06ebf85f113adf638572dde4 /biology
parent"Wise2 is package that is focused on comparing DNA sequences at (diff)
Flip is used to find/translate orfs.
WWW: ftp://megasun.bch.umontreal.ca/pub/flip/ PR: 35332 Submitted by: tonym@biolateral.com.au
Notes
Notes: svn path=/head/; revision=66055
Diffstat (limited to 'biology')
-rw-r--r--biology/Makefile1
-rw-r--r--biology/flip/Makefile26
-rw-r--r--biology/flip/distinfo1
-rw-r--r--biology/flip/pkg-comment1
-rw-r--r--biology/flip/pkg-descr3
-rw-r--r--biology/flip/pkg-plist1
6 files changed, 33 insertions, 0 deletions
diff --git a/biology/Makefile b/biology/Makefile
index f46d36d67014..b1ec79a0e5a1 100644
--- a/biology/Makefile
+++ b/biology/Makefile
@@ -16,6 +16,7 @@
SUBDIR += fasta
SUBDIR += fasta3
SUBDIR += fastdnaml
+ SUBDIR += flip
SUBDIR += fluctuate
SUBDIR += gaussian98
SUBDIR += genpak
diff --git a/biology/flip/Makefile b/biology/flip/Makefile
new file mode 100644
index 000000000000..dc48360a0059
--- /dev/null
+++ b/biology/flip/Makefile
@@ -0,0 +1,26 @@
+# New ports collection makefile for: flip
+# Date created: 26 February 2002
+# Whom: Tony Maher <tonym@biolateral.com.au>
+#
+# $FreeBSD$
+#
+
+PORTNAME= flip
+PORTVERSION= 2.0.2
+CATEGORIES= biology
+MASTER_SITES= ftp://megasun.bch.umontreal.ca/pub/flip/
+
+MAINTAINER= tonym@biolateral.com.au
+
+MAN1= flip.1
+
+# make it respect CFLAGS
+
+post-configure:
+ @${PERL} -pi.orig -e 's/CFLAGS=//' ${WRKSRC}/${MAKEFILE}
+
+do-install:
+ ${INSTALL_PROGRAM} ${WRKSRC}/flip ${PREFIX}/bin
+ ${INSTALL_MAN} ${WRKSRC}/${MAN1} ${PREFIX}/man/man1
+
+.include <bsd.port.mk>
diff --git a/biology/flip/distinfo b/biology/flip/distinfo
new file mode 100644
index 000000000000..b9e5261df723
--- /dev/null
+++ b/biology/flip/distinfo
@@ -0,0 +1 @@
+MD5 (flip-2.0.2.tar.gz) = a579fcb268ddf7ba39a5355ea73da0a6
diff --git a/biology/flip/pkg-comment b/biology/flip/pkg-comment
new file mode 100644
index 000000000000..c7bc7af7820a
--- /dev/null
+++ b/biology/flip/pkg-comment
@@ -0,0 +1 @@
+Flip is used to find/translate orfs
diff --git a/biology/flip/pkg-descr b/biology/flip/pkg-descr
new file mode 100644
index 000000000000..70a55439190c
--- /dev/null
+++ b/biology/flip/pkg-descr
@@ -0,0 +1,3 @@
+Flip is used to find/translate orfs.
+
+WWW: ftp://megasun.bch.umontreal.ca/pub/flip/
diff --git a/biology/flip/pkg-plist b/biology/flip/pkg-plist
new file mode 100644
index 000000000000..9e9435b7cc7a
--- /dev/null
+++ b/biology/flip/pkg-plist
@@ -0,0 +1 @@
+bin/flip