diff options
author | Christian Weisgerber <naddy@FreeBSD.org> | 2003-02-11 18:13:27 +0000 |
---|---|---|
committer | Christian Weisgerber <naddy@FreeBSD.org> | 2003-02-11 18:13:27 +0000 |
commit | aeefc83b6ce0f12649d48480725bd0f44ea14563 (patch) | |
tree | 773f353157961fa6299029bc7054816e155ea9f3 /biology | |
parent | upgrade to 0.12 (diff) |
Update to version 0.5.1.
PR: 48047
Submitted by: Ports Fury
Notes
Notes:
svn path=/head/; revision=75308
Diffstat (limited to 'biology')
-rw-r--r-- | biology/libgenome/Makefile | 7 | ||||
-rw-r--r-- | biology/libgenome/distinfo | 2 | ||||
-rw-r--r-- | biology/libgenome/files/patch-include::gn::gnCompare.h | 10 | ||||
-rw-r--r-- | biology/libgenome/files/patch-include::gn::gnException.h | 10 | ||||
-rw-r--r-- | biology/libgenome/files/patch-include::gn::gnFastTranslator.h | 10 | ||||
-rw-r--r-- | biology/libgenome/files/patch-include::gn::gnFileContig.h | 11 | ||||
-rw-r--r-- | biology/libgenome/files/patch-include::gn::gnSourceHeader.h | 11 | ||||
-rw-r--r-- | biology/libgenome/files/patch-include::gn::gnSourceQualifier.h | 11 |
8 files changed, 4 insertions, 68 deletions
diff --git a/biology/libgenome/Makefile b/biology/libgenome/Makefile index 833f646d2de2..2695838321e7 100644 --- a/biology/libgenome/Makefile +++ b/biology/libgenome/Makefile @@ -7,8 +7,7 @@ # PORTNAME= libgenome -PORTVERSION= 0.5.0 -PORTREVISION= 1 +PORTVERSION= 0.5.1 CATEGORIES= biology MASTER_SITES= http://www.libgenome.org/releases/ DISTNAME= libGenome-${PORTVERSION} @@ -17,11 +16,11 @@ MAINTAINER= ports@FreeBSD.org USE_REINPLACE= yes USE_LIBTOOL= yes -CONFIGURE_TARGET= --build=${ARCH}-portbld-freebsd${OSREL} +CONFIGURE_TARGET= --build=${MACHINE_ARCH}-portbld-freebsd${OSREL} INSTALLS_SHLIB= yes post-patch: - @${REINPLACE_CMD} -e 's|-O3|@CXXFLAGS@|g' ${WRKSRC}/src/Makefile.in + @${REINPLACE_CMD} -e 's|-O2|@CXXFLAGS@|g' ${WRKSRC}/src/Makefile.in post-install: .if !defined(NOPORTDOCS) diff --git a/biology/libgenome/distinfo b/biology/libgenome/distinfo index b5a1be9e6724..ceec061cd6b0 100644 --- a/biology/libgenome/distinfo +++ b/biology/libgenome/distinfo @@ -1 +1 @@ -MD5 (libGenome-0.5.0.tar.gz) = dc4351115328a4d10fb52850ee6675d1 +MD5 (libGenome-0.5.1.tar.gz) = da0b97fab9a374d8674a1de06a4a911c diff --git a/biology/libgenome/files/patch-include::gn::gnCompare.h b/biology/libgenome/files/patch-include::gn::gnCompare.h deleted file mode 100644 index e33025bdb37d..000000000000 --- a/biology/libgenome/files/patch-include::gn::gnCompare.h +++ /dev/null @@ -1,10 +0,0 @@ ---- include/gn/gnCompare.h.orig Tue Nov 20 09:23:47 2001 -+++ include/gn/gnCompare.h Sun Dec 22 09:45:37 2002 -@@ -15,6 +15,7 @@ - - #include "gn/gnDefs.h" - -+#include <cctype> - #include <string> - #include "gn/gnClone.h" - diff --git a/biology/libgenome/files/patch-include::gn::gnException.h b/biology/libgenome/files/patch-include::gn::gnException.h deleted file mode 100644 index 5abab05ab50f..000000000000 --- a/biology/libgenome/files/patch-include::gn::gnException.h +++ /dev/null @@ -1,10 +0,0 @@ ---- include/gn/gnException.h.orig Sat Dec 1 05:57:29 2001 -+++ include/gn/gnException.h Sun Dec 22 12:44:39 2002 -@@ -4,6 +4,7 @@ - #include "gnClone.h" - #include "gn/gnExceptionCode.h" - #include <string> -+#include <iostream> - #include <list> - - class GNDLLEXPORT gnException diff --git a/biology/libgenome/files/patch-include::gn::gnFastTranslator.h b/biology/libgenome/files/patch-include::gn::gnFastTranslator.h deleted file mode 100644 index 3b16c3b8cf94..000000000000 --- a/biology/libgenome/files/patch-include::gn::gnFastTranslator.h +++ /dev/null @@ -1,10 +0,0 @@ ---- include/gn/gnFastTranslator.h.orig Tue Mar 19 08:52:51 2002 -+++ include/gn/gnFastTranslator.h Fri Dec 27 21:15:56 2002 -@@ -17,6 +17,7 @@ - #include "gn/gnDefs.h" - - #include <string> -+#include <iostream> - #include <vector> - #include <map> - #include "gn/gnClone.h" diff --git a/biology/libgenome/files/patch-include::gn::gnFileContig.h b/biology/libgenome/files/patch-include::gn::gnFileContig.h deleted file mode 100644 index 77d8d7550bef..000000000000 --- a/biology/libgenome/files/patch-include::gn::gnFileContig.h +++ /dev/null @@ -1,11 +0,0 @@ ---- include/gn/gnFileContig.h.orig Wed Jul 18 01:52:09 2001 -+++ include/gn/gnFileContig.h Sun Dec 22 12:51:21 2002 -@@ -17,7 +17,7 @@ - - #include <string> - #include "gn/gnClone.h" --#ifdef __GNUG__ -+#if (defined(__GNUC__) && (__GNUC__) < 3) - #include "pair.h" - #endif - diff --git a/biology/libgenome/files/patch-include::gn::gnSourceHeader.h b/biology/libgenome/files/patch-include::gn::gnSourceHeader.h deleted file mode 100644 index 7d44dd8d3cba..000000000000 --- a/biology/libgenome/files/patch-include::gn::gnSourceHeader.h +++ /dev/null @@ -1,11 +0,0 @@ ---- include/gn/gnSourceHeader.h.orig Tue Oct 16 02:59:53 2001 -+++ include/gn/gnSourceHeader.h Sun Dec 22 12:50:29 2002 -@@ -19,7 +19,7 @@ - #include "gn/gnBaseHeader.h" - #include "gn/gnBaseSource.h" - --#ifdef __GNUG__ -+#if (defined(__GNUC__) && (__GNUC__) < 3) - #include "pair.h" - #endif - diff --git a/biology/libgenome/files/patch-include::gn::gnSourceQualifier.h b/biology/libgenome/files/patch-include::gn::gnSourceQualifier.h deleted file mode 100644 index 57b6706d0648..000000000000 --- a/biology/libgenome/files/patch-include::gn::gnSourceQualifier.h +++ /dev/null @@ -1,11 +0,0 @@ ---- include/gn/gnSourceQualifier.h.orig Tue Oct 16 02:59:53 2001 -+++ include/gn/gnSourceQualifier.h Sun Dec 22 12:48:20 2002 -@@ -19,7 +19,7 @@ - #include "gn/gnBaseQualifier.h" - #include "gn/gnBaseSource.h" - --#ifdef __GNUG__ -+#if (defined(__GNUC__) && (__GNUC__) < 3) - #include "pair.h" - #endif - |