diff options
| author | Bill Fenner <fenner@FreeBSD.org> | 1999-03-08 20:23:47 +0000 |
|---|---|---|
| committer | Bill Fenner <fenner@FreeBSD.org> | 1999-03-08 20:23:47 +0000 |
| commit | b0f9653aeaec7d62b47e9f7924fbda2f3d5d3b2c (patch) | |
| tree | 40eeb3c9db5d4d7f336fe577da9f073461f338f5 /biology | |
| parent | Upgrade kmpg to 0.4.0, and change MAINTAINER. (diff) | |
Upgrade to 2.1.1
PR: ports/10228
Submitted by: Michael Haro mharo@area51.fremont.ca.us
Notes
Notes:
svn path=/head/; revision=17072
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/hmmer/Makefile | 16 | ||||
| -rw-r--r-- | biology/hmmer/distinfo | 2 | ||||
| -rw-r--r-- | biology/hmmer/pkg-plist | 6 |
3 files changed, 16 insertions, 8 deletions
diff --git a/biology/hmmer/Makefile b/biology/hmmer/Makefile index 1fec7ac487c0..d30140a70737 100644 --- a/biology/hmmer/Makefile +++ b/biology/hmmer/Makefile @@ -3,27 +3,29 @@ # Date created: June 29 1998 # Whom: barnhart@genetics.wustl.edu # -# $Id: Makefile,v 1.2 1998/12/09 22:35:04 billf Exp $ +# $Id: Makefile,v 1.3 1999/01/02 00:12:17 asami Exp $ # -DISTNAME= hmmer-2.0 +DISTNAME= hmmer-2.1.1 CATEGORIES= biology -MASTER_SITES= ftp://ftp.genetics.wustl.edu/pub/eddy/hmmer/oldversions/2.0/ +MASTER_SITES= ftp://ftp.genetics.wustl.edu/pub/eddy/hmmer/ EXTRACT_SUFX= .tar.Z MAINTAINER= barnhart@genetics.wustl.edu -USE_PERL5= yes -MAN1= hmmalign.1 hmmbuild.1 hmmcalibrate.1 hmmconvert.1 hmmemit.1 hmmer.1 hmmpfam.1 hmmsearch.1 +GNU_CONFIGURE= yes -WRKSRC= ${WRKDIR}/build/${DISTNAME} +USE_PERL5= yes +MAN1= hmmalign.1 hmmbuild.1 hmmcalibrate.1 hmmconvert.1 hmmemit.1 \ + hmmer.1 hmmpfam.1 hmmsearch.1 hmmfetch.1 hmmindex.1 alistat.1 \ + getseq.1 seqstat.1 sreformat.1 post-build: @ strip ${WRKSRC}/binaries/* @ make test test: - @(cd ${WRKSRC}; make test) + @(cd ${WRKSRC}; make check) post-install: .if !defined(NOPORTDOCS) diff --git a/biology/hmmer/distinfo b/biology/hmmer/distinfo index c9d8219fb787..6dbe81b02fd8 100644 --- a/biology/hmmer/distinfo +++ b/biology/hmmer/distinfo @@ -1 +1 @@ -MD5 (hmmer-2.0.tar.Z) = 7e993a3883046840f0672ea004bc268b +MD5 (hmmer-2.1.1.tar.Z) = 0f98910a3507b4d52fbe82adc6fa89b5 diff --git a/biology/hmmer/pkg-plist b/biology/hmmer/pkg-plist index dc16278bb404..07e78f33b196 100644 --- a/biology/hmmer/pkg-plist +++ b/biology/hmmer/pkg-plist @@ -1,9 +1,15 @@ +bin/alistat +bin/getseq bin/hmmalign bin/hmmbuild bin/hmmcalibrate bin/hmmconvert bin/hmmemit +bin/hmmfetch +bin/hmmindex bin/hmmpfam bin/hmmsearch +bin/seqstat +bin/sreformat share/doc/hmmer/Userguide.ps @dirrm share/doc/hmmer |