diff options
| author | Jason W. Bacon <jwb@FreeBSD.org> | 2023-10-15 06:47:27 -0500 |
|---|---|---|
| committer | Jason W. Bacon <jwb@FreeBSD.org> | 2023-10-15 06:49:05 -0500 |
| commit | f95880107ae1f12e660b08f24dacb3b88bf176bd (patch) | |
| tree | db0f35f48ec27d39797d3beea07af8cb2701c2b6 /biology | |
| parent | math/armadillo: Update to 12.6.5 (diff) | |
biology/gcta: Add temporary hack for building on aarch64
Add USE_GCC to work around this issue with clang:
/usr/ports/biology/gcta/work/gcta-1.94.1/submods/plink-ng/2.0/ \
plink2_base.h:1008:23: error: argument to '__builtin_neon_vshrq_n_v' \
must be a constant integer
return R_CAST(VecW, _mm_srli_epi64(R_CAST(__m128i, vv), ct));
/usr/lib/clang/14.0.5/include/arm_neon.h:25260:24: note: expanded from \
macro 'vshrq_n_u64'
__ret = (uint64x2_t) __builtin_neon_vshrq_n_v((int8x16_t)__s0, __p1, 51);
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/gcta/Makefile | 13 |
1 files changed, 12 insertions, 1 deletions
diff --git a/biology/gcta/Makefile b/biology/gcta/Makefile index 5599f5c22fee..c9aef3210017 100644 --- a/biology/gcta/Makefile +++ b/biology/gcta/Makefile @@ -32,9 +32,20 @@ LDFLAGS+= -fopenmp PLIST_FILES= bin/gcta64 bin/gcta +.include <bsd.port.pre.mk> + +# Temporary hack for clang build errors: +# /usr/ports/biology/gcta/work/gcta-1.94.1/submods/plink-ng/2.0/plink2_base.h:1008:23: error: argument to '__builtin_neon_vshrq_n_v' must be a constant integer +# return R_CAST(VecW, _mm_srli_epi64(R_CAST(__m128i, vv), ct)); +# /usr/lib/clang/14.0.5/include/arm_neon.h:25260:24: note: expanded from macro 'vshrq_n_u64' +# __ret = (uint64x2_t) __builtin_neon_vshrq_n_v((int8x16_t)__s0, __p1, 51); +.if ${ARCH} == aarch64 +USE_GCC= yes +.endif + do-install: @${MKDIR} ${STAGEDIR}${PREFIX}/bin ${INSTALL_PROGRAM} ${BUILD_WRKSRC}/gcta64 ${STAGEDIR}${PREFIX}/bin ${RLN} ${STAGEDIR}${PREFIX}/bin/gcta64 ${STAGEDIR}${PREFIX}/bin/gcta -.include <bsd.port.mk> +.include <bsd.port.post.mk> |