diff options
| author | Beat Gaetzi <beat@FreeBSD.org> | 2011-01-26 20:26:36 +0000 |
|---|---|---|
| committer | Beat Gaetzi <beat@FreeBSD.org> | 2011-01-26 20:26:36 +0000 |
| commit | ae9f790ad13eb536cf2191ff023c695064ed96c6 (patch) | |
| tree | 66275016563ff270b032827d4702ea9d29cd89cc /biology | |
| parent | Mark this as deprecated, since it doesn't fetch, only builds on 8, and (diff) | |
- Update to 36.3.2 to fix distfile fetching on pointyhat
PR: ports/154267
Submitted by: Fernan Aguero <fernan AT iib.unsam.edu.ar> (maintainer)
Feature safe: yes
Notes
Notes:
svn path=/head/; revision=268272
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/fasta3/Makefile | 16 | ||||
| -rw-r--r-- | biology/fasta3/distinfo | 5 | ||||
| -rw-r--r-- | biology/fasta3/pkg-plist | 8 |
3 files changed, 13 insertions, 16 deletions
diff --git a/biology/fasta3/Makefile b/biology/fasta3/Makefile index e0bcd8c78aca..f6cc152969f8 100644 --- a/biology/fasta3/Makefile +++ b/biology/fasta3/Makefile @@ -7,9 +7,9 @@ # PORTNAME= fasta3 -PORTVERSION= 35.4.9 +PORTVERSION= 36.3.2 CATEGORIES= biology -MASTER_SITES= http://faculty.virginia.edu/wrpearson/fasta/fasta3/ +MASTER_SITES= http://faculty.virginia.edu/wrpearson/fasta/fasta36/ DISTNAME= fasta-${PORTVERSION} MAINTAINER= fernan@iib.unsam.edu.ar @@ -34,12 +34,12 @@ FASTA3_DOCS= README.versions fasta3x.me fasta3x.doc \ DATA= data/*.mat EXAMPLES= seq/*.aa seq/*.lc seq/*.seq seq/*.lib -MAN1= fasta35.1 map_db.1 ps_lav.1 pvcomp.1 -MLINKS= fasta35.1 tfasta35.1 fasta35.1 fastx35.1 fasta35.1 tfastx35.1 \ - fasta35.1 fasty35.1 fasta35.1 tfasty35.1 fasta35.1 ssearch35.1 \ - fasta35.1 fastf35.1 fasta35.1 fasts35.1 fasta35.1 tfasts35.1 \ - fasta35.1 fastm35.1 fasta35.1 tfastf35.1 fasta35.1 ggsearch35.1 \ - fasta35.1 lalign35.1 fasta35.1 prss35.1 fasta35.1 prfx35.1 +MAN1= fasta36.1 fastf3.1 fasts3.1 prss3.1 map_db.1 ps_lav.1 +MLINKS= fasta36.1 tfasta35.1 fasta36.1 fastx35.1 fasta36.1 tfastx35.1 \ + fasta36.1 fasty35.1 fasta36.1 tfasty35.1 fasta36.1 ssearch35.1 \ + fasta36.1 fastf35.1 fasta36.1 fasts35.1 fasta36.1 tfasts35.1 \ + fasta36.1 fastm35.1 fasta36.1 tfastf35.1 fasta36.1 ggsearch35.1 \ + fasta36.1 lalign35.1 fasta36.1 prss35.1 fasta36.1 prfx35.1 PLIST_SUB= VER=${PORTVERSION:R:R} post-patch: diff --git a/biology/fasta3/distinfo b/biology/fasta3/distinfo index c23995fba9ed..18f14d4f2af2 100644 --- a/biology/fasta3/distinfo +++ b/biology/fasta3/distinfo @@ -1,3 +1,2 @@ -MD5 (fasta-35.4.9.tar.gz) = 6bf19b771f2c64287b7713864b9f0a69 -SHA256 (fasta-35.4.9.tar.gz) = 4beaed42557572a1c8e5480e93641af175fa43c545f75c4bf06db62dced6bd39 -SIZE (fasta-35.4.9.tar.gz) = 630748 +SHA256 (fasta-36.3.2.tar.gz) = 1eddb7dac3a52311d43bac854b2153c13aa23cbb163952c9e385a75aa2b9e446 +SIZE (fasta-36.3.2.tar.gz) = 711876 diff --git a/biology/fasta3/pkg-plist b/biology/fasta3/pkg-plist index 578f0d04e515..1e5d72a5e1fd 100644 --- a/biology/fasta3/pkg-plist +++ b/biology/fasta3/pkg-plist @@ -17,7 +17,6 @@ bin/glsearch%%VER%%_t bin/lalign%%VER%% bin/lav2ps bin/lav2svg -bin/list_db bin/map_db bin/ssearch%%VER%% bin/ssearch%%VER%%_t @@ -39,10 +38,6 @@ etc/fastlibs.sample %%PORTDOCS%%%%DOCSDIR%%/fasta3x.doc %%PORTDOCS%%%%DOCSDIR%%/fasta20.doc %%PORTDOCS%%%%DOCSDIR%%/fasta_func.doc -%%PORTDOCS%%%%DOCSDIR%%/readme.mpi_3.3 -%%PORTDOCS%%%%DOCSDIR%%/readme.pvm_3.2 -%%PORTDOCS%%%%DOCSDIR%%/readme.pvm_3.3 -%%PORTDOCS%%%%DOCSDIR%%/readme.pvm_3.4 %%PORTDOCS%%%%DOCSDIR%%/readme.v30 %%PORTDOCS%%%%DOCSDIR%%/readme.v30t6 %%PORTDOCS%%%%DOCSDIR%%/readme.v30t7 @@ -52,12 +47,14 @@ etc/fastlibs.sample %%PORTDOCS%%%%DOCSDIR%%/readme.v33t0 %%PORTDOCS%%%%DOCSDIR%%/readme.v34t0 %%PORTDOCS%%%%DOCSDIR%%/readme.v35 +%%PORTDOCS%%%%DOCSDIR%%/readme.v36 %%PORTDOCS%%%%DOCSDIR%%/readme.w32 %%PORTDOCS%%%%DOCSDIR%%/fasta.defaults %%PORTDOCS%%%%DOCSDIR%%/fasta.options %%PORTDOCS%%%%DOCSDIR%%/fasta_versions.html %%PORTDOCS%%%%DOCSDIR%%/changes_v34.html %%PORTDOCS%%%%DOCSDIR%%/changes_v35.html +%%PORTDOCS%%%%DOCSDIR%%/changes_v36.html %%EXAMPLESDIR%%/egmsmg.aa %%EXAMPLESDIR%%/gstt1_drome.aa %%EXAMPLESDIR%%/gtm1_human.aa @@ -95,6 +92,7 @@ etc/fastlibs.sample %%EXAMPLESDIR%%/hsgstm1b.seq %%EXAMPLESDIR%%/humgstd.seq %%EXAMPLESDIR%%/mgstm1.seq +%%EXAMPLESDIR%%/mgstm1_genclone.seq %%EXAMPLESDIR%%/mgtt2_x.seq %%EXAMPLESDIR%%/titin_hum.seq %%EXAMPLESDIR%%/mu.lib |