diff options
| author | Rong-En Fan <rafan@FreeBSD.org> | 2008-04-13 07:22:42 +0000 |
|---|---|---|
| committer | Rong-En Fan <rafan@FreeBSD.org> | 2008-04-13 07:22:42 +0000 |
| commit | 6098818ed49960dcab9b68b012f0cc99491e75c8 (patch) | |
| tree | 3ed08cf5cee089ea60df6c0925673a69f933ca49 /biology/embassy/Makefile | |
| parent | - Sort pkg-plist before updating to 5.0.0 (diff) | |
- Update to 5.0.0
PR: ports/122437
Submitted by: Fernan Aguero <fernan at iib.unsam.edu.ar> (maintainer)
Notes
Notes:
svn path=/head/; revision=211152
Diffstat (limited to 'biology/embassy/Makefile')
| -rw-r--r-- | biology/embassy/Makefile | 22 |
1 files changed, 12 insertions, 10 deletions
diff --git a/biology/embassy/Makefile b/biology/embassy/Makefile index cacec45675aa..2eb8ff563189 100644 --- a/biology/embassy/Makefile +++ b/biology/embassy/Makefile @@ -7,19 +7,16 @@ # PORTNAME= embassy -PORTVERSION= 3.0.0 -PORTREVISION= 2 +PORTVERSION= 5.0.0 CATEGORIES= biology MASTER_SITES= ftp://emboss.open-bio.org/pub/EMBOSS/ \ - ftp://ftp.uk.embnet.org/pub/EMBOSS/ \ - ftp://ftp.es.embnet.org/pub/software/emboss/EMBOSS/ \ ftp://ftp.ebi.ac.uk/pub/software/unix/EMBOSS/ DIST_SUBDIR= emboss MAINTAINER= fernan@iib.unsam.edu.ar COMMENT= A collection of contributed EMBOSS applications -LIB_DEPENDS= nucleus.3:${PORTSDIR}/biology/emboss +LIB_DEPENDS= nucleus.5:${PORTSDIR}/biology/emboss PREFIX?= ${LOCALBASE}/emboss NO_MTREE= yes @@ -27,7 +24,9 @@ USE_SUBMAKE= yes USE_ICONV= yes USE_GMAKE= yes GNU_CONFIGURE= yes +USE_XORG= x11 USE_MOTIF= yes +USE_LDCONFIG= yes OPTIONS= DOMAINATRIX "Protein domain apps" on \ DOMALIGN "Protein domain apps" on \ @@ -41,7 +40,8 @@ OPTIONS= DOMAINATRIX "Protein domain apps" on \ MSE "A multiple sequence screen editor" on \ MYEMBOSS "Examples for developers of EMBOSS apps" on \ PHYLIP "Phylogeny inference" on \ - TOPO "Transmembrane display" on + TOPO "Transmembrane display" on \ + VIENNA "RNA folding" on CONFIGURE_ENV+= CPPFLAGS="-I${PREFIX}/include -I${LOCALBASE}/include" \ LDFLAGS="-L${PREFIX}/lib -L${LOCALBASE}/lib" @@ -50,8 +50,8 @@ EMBASSY_WRKDIR= ${WRKSRC}/EMBASSY DOMAINATRIX_VERSION= 0.1.0 EMNU_VERSION= 1.05 ESIM4_VERSION= 1.0.0 -HMMER_VERSION= 2.1.1 -MEME_VERSION= 2.3.1 +HMMER_VERSION= 2.3.2 +MEME_VERSION= 0.1.0 MSE_VERSION= 1.0.0 TOPO_VERSION= 1.0.0 PHYLIP_VERSION= 3.6b @@ -60,8 +60,10 @@ DOMSEARCH_VERSION= 0.1.0 SIGNATURE_VERSION= 0.1.0 STRUCTURE_VERSION= 0.1.0 MYEMBOSS_VERSION= 3.0.0 -EMBASSY_APPS= DOMAINATRIX EMNU ESIM4 HMMER MEME MSE PHYLIP TOPO \ - DOMALIGN DOMSEARCH SIGNATURE STRUCTURE MYEMBOSS +VIENNA_VERSION= 1.6 +EMBASSY_APPS= DOMAINATRIX EMNU ESIM4 HMMER MEME MSE PHYLIP \ + TOPO DOMALIGN DOMSEARCH SIGNATURE STRUCTURE MYEMBOSS \ + VIENNA .include <bsd.port.pre.mk> |