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PORTNAME= peak-classifier
DISTVERSION= 0.1.2
CATEGORIES= biology
MAINTAINER= jwb@FreeBSD.org
COMMENT= Classify ChIP/ATAC-Seq peaks based on features provided in a GFF
LICENSE= BSD2CLAUSE
LICENSE_FILE= ${WRKSRC}/LICENSE
LIB_DEPENDS= libxtend.so:devel/libxtend libbiolibc.so:biology/biolibc
RUN_DEPENDS= bedtools:biology/bedtools \
${PYTHON_PKGNAMEPREFIX}matplotlib>0:math/py-matplotlib@${PY_FLAVOR}
USES= localbase python:3.7+ shebangfix
USE_GITHUB= yes
GH_ACCOUNT= auerlab
SHEBANG_FILES= feature-view.py
pre-build:
cd ${WRKSRC} && make depend LOCALBASE=${LOCALBASE}
.include <bsd.port.mk>
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